A citation-based method for searching scientific literature

Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk, Sandro Banfi, Giancarlo Parenti, Elena Cattaneo, Andrea Ballabio. Science 2009
Times Cited: 1504







List of co-cited articles
862 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
55

A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB.
Carmine Settembre, Roberto Zoncu, Diego L Medina, Francesco Vetrini, Serkan Erdin, SerpilUckac Erdin, Tuong Huynh, Mathieu Ferron, Gerard Karsenty, Michel C Vellard,[...]. EMBO J 2012
29

Lysosomal calcium signalling regulates autophagy through calcineurin and ​TFEB.
Diego L Medina, Simone Di Paola, Ivana Peluso, Andrea Armani, Diego De Stefani, Rossella Venditti, Sandro Montefusco, Anna Scotto-Rosato, Carolina Prezioso, Alison Forrester,[...]. Nat Cell Biol 2015
759
22

MTORC1 functions as a transcriptional regulator of autophagy by preventing nuclear transport of TFEB.
Jose A Martina, Yong Chen, Marjan Gucek, Rosa Puertollano. Autophagy 2012
746
22

The transcription factor TFEB links mTORC1 signaling to transcriptional control of lysosome homeostasis.
Agnes Roczniak-Ferguson, Constance S Petit, Florian Froehlich, Sharon Qian, Jennifer Ky, Brittany Angarola, Tobias C Walther, Shawn M Ferguson. Sci Signal 2012
798
19

TFEB controls cellular lipid metabolism through a starvation-induced autoregulatory loop.
Carmine Settembre, Rossella De Cegli, Gelsomina Mansueto, Pradip K Saha, Francesco Vetrini, Orane Visvikis, Tuong Huynh, Annamaria Carissimo, Donna Palmer, Tiemo Jürgen Klisch,[...]. Nat Cell Biol 2013
611
16

Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways.
Michela Palmieri, Soren Impey, Hyojin Kang, Alberto di Ronza, Carl Pelz, Marco Sardiello, Andrea Ballabio. Hum Mol Genet 2011
558
15

TFEB at a glance.
Gennaro Napolitano, Andrea Ballabio. J Cell Sci 2016
405
13

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
12

Transcriptional control of autophagy-lysosome function drives pancreatic cancer metabolism.
Rushika M Perera, Svetlana Stoykova, Brandon N Nicolay, Kenneth N Ross, Julien Fitamant, Myriam Boukhali, Justine Lengrand, Vikram Deshpande, Martin K Selig, Cristina R Ferrone,[...]. Nature 2015
506
12

mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases.
Michela Palmieri, Rituraj Pal, Hemanth R Nelvagal, Parisa Lotfi, Gary R Stinnett, Michelle L Seymour, Arindam Chaudhury, Lakshya Bajaj, Vitaliy V Bondar, Laura Bremner,[...]. Nat Commun 2017
255
12

Ragulator-Rag complex targets mTORC1 to the lysosomal surface and is necessary for its activation by amino acids.
Yasemin Sancak, Liron Bar-Peled, Roberto Zoncu, Andrew L Markhard, Shigeyuki Nada, David M Sabatini. Cell 2010
12

A substrate-specific mTORC1 pathway underlies Birt-Hogg-Dubé syndrome.
Gennaro Napolitano, Chiara Di Malta, Alessandra Esposito, Mariana E G de Araujo, Salvatore Pece, Giovanni Bertalot, Maria Matarese, Valerio Benedetti, Angela Zampelli, Taras Stasyk,[...]. Nature 2020
99
11

Transcriptional activation of lysosomal exocytosis promotes cellular clearance.
Diego L Medina, Alessandro Fraldi, Valentina Bouche, Fabio Annunziata, Gelsomina Mansueto, Carmine Spampanato, Claudia Puri, Antonella Pignata, Jose A Martina, Marco Sardiello,[...]. Dev Cell 2011
447
11

Lysosomes as dynamic regulators of cell and organismal homeostasis.
Andrea Ballabio, Juan S Bonifacino. Nat Rev Mol Cell Biol 2020
380
11

Signals from the lysosome: a control centre for cellular clearance and energy metabolism.
Carmine Settembre, Alessandro Fraldi, Diego L Medina, Andrea Ballabio. Nat Rev Mol Cell Biol 2013
984
10

TFEB-mediated autophagy rescues midbrain dopamine neurons from α-synuclein toxicity.
Mickael Decressac, Bengt Mattsson, Pia Weikop, Martin Lundblad, Johan Jakobsson, Anders Björklund. Proc Natl Acad Sci U S A 2013
483
10

The nutrient-responsive transcription factor TFE3 promotes autophagy, lysosomal biogenesis, and clearance of cellular debris.
José A Martina, Heba I Diab, Li Lishu, Lim Jeong-A, Simona Patange, Nina Raben, Rosa Puertollano. Sci Signal 2014
372
9


The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans.
Louis R Lapierre, C Daniel De Magalhaes Filho, Philip R McQuary, Chu-Chiao Chu, Orane Visvikis, Jessica T Chang, Sara Gelino, Binnan Ong, Andrew E Davis, Javier E Irazoqui,[...]. Nat Commun 2013
291
9

TFEB and TFE3 are novel components of the integrated stress response.
José A Martina, Heba I Diab, Owen A Brady, Rosa Puertollano. EMBO J 2016
164
9

The Autophagy-Lysosomal Pathway in Neurodegeneration: A TFEB Perspective.
Heidi Martini-Stoica, Yin Xu, Andrea Ballabio, Hui Zheng. Trends Neurosci 2016
210
9

The complex relationship between TFEB transcription factor phosphorylation and subcellular localization.
Rosa Puertollano, Shawn M Ferguson, James Brugarolas, Andrea Ballabio. EMBO J 2018
230
8

The Rag GTPases bind raptor and mediate amino acid signaling to mTORC1.
Yasemin Sancak, Timothy R Peterson, Yoav D Shaul, Robert A Lindquist, Carson C Thoreen, Liron Bar-Peled, David M Sabatini. Science 2008
8

Neuronal-Targeted TFEB Accelerates Lysosomal Degradation of APP, Reducing Aβ Generation and Amyloid Plaque Pathogenesis.
Qingli Xiao, Ping Yan, Xiucui Ma, Haiyan Liu, Ronaldo Perez, Alec Zhu, Ernesto Gonzales, Danielle L Tripoli, Leah Czerniewski, Andrea Ballabio,[...]. J Neurosci 2015
147
8

mTOR-dependent phosphorylation controls TFEB nuclear export.
Gennaro Napolitano, Alessandra Esposito, Heejun Choi, Maria Matarese, Valerio Benedetti, Chiara Di Malta, Jlenia Monfregola, Diego Luis Medina, Jennifer Lippincott-Schwartz, Andrea Ballabio. Nat Commun 2018
158
8

Lysosomal physiology.
Haoxing Xu, Dejian Ren. Annu Rev Physiol 2015
543
8

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
8

The Lysosome as a Regulatory Hub.
Rushika M Perera, Roberto Zoncu. Annu Rev Cell Dev Biol 2016
287
7

Termination of autophagy and reformation of lysosomes regulated by mTOR.
Li Yu, Christina K McPhee, Lixin Zheng, Gonzalo A Mardones, Yueguang Rong, Junya Peng, Na Mi, Ying Zhao, Zhihua Liu, Fengyi Wan,[...]. Nature 2010
7

mTORC1 senses lysosomal amino acids through an inside-out mechanism that requires the vacuolar H(+)-ATPase.
Roberto Zoncu, Liron Bar-Peled, Alejo Efeyan, Shuyu Wang, Yasemin Sancak, David M Sabatini. Science 2011
7


PGC-1α rescues Huntington's disease proteotoxicity by preventing oxidative stress and promoting TFEB function.
Taiji Tsunemi, Travis D Ashe, Bradley E Morrison, Kathryn R Soriano, Jonathan Au, Ruben A Vázquez Roque, Eduardo R Lazarowski, Vincent A Damian, Eliezer Masliah, Albert R La Spada. Sci Transl Med 2012
320
7

Compromised autophagy and neurodegenerative diseases.
Fiona M Menzies, Angeleen Fleming, David C Rubinsztein. Nat Rev Neurosci 2015
524
7

Selective clearance of aberrant tau proteins and rescue of neurotoxicity by transcription factor EB.
Vinicia A Polito, Hongmei Li, Heidi Martini-Stoica, Baiping Wang, Li Yang, Yin Xu, Daniel B Swartzlander, Michela Palmieri, Alberto di Ronza, Virginia M-Y Lee,[...]. EMBO Mol Med 2014
223
7

Protein kinase C controls lysosome biogenesis independently of mTORC1.
Yang Li, Meng Xu, Xiao Ding, Chen Yan, Zhiqin Song, Lianwan Chen, Xiahe Huang, Xin Wang, Youli Jian, Guihua Tang,[...]. Nat Cell Biol 2016
205
7

Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy.
Daniel F Egan, David B Shackelford, Maria M Mihaylova, Sara Gelino, Rebecca A Kohnz, William Mair, Debbie S Vasquez, Aashish Joshi, Dana M Gwinn, Rebecca Taylor,[...]. Science 2011
6

Impaired TFEB-Mediated Lysosome Biogenesis and Autophagy Promote Chronic Ethanol-Induced Liver Injury and Steatosis in Mice.
Xiaojuan Chao, Shaogui Wang, Katrina Zhao, Yuan Li, Jessica A Williams, Tiangang Li, Hemantkumar Chavan, Partha Krishnamurthy, Xi C He, Linheng Li,[...]. Gastroenterology 2018
141
6

CDK4/6 regulate lysosome biogenesis through TFEB/TFE3.
Qiuyuan Yin, Youli Jian, Meng Xu, Xiahe Huang, Niya Wang, Zhifang Liu, Qian Li, Jinglin Li, Hejiang Zhou, Lin Xu,[...]. J Cell Biol 2020
42
14

Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy.
Nao Hosokawa, Taichi Hara, Takeshi Kaizuka, Chieko Kishi, Akito Takamura, Yutaka Miura, Shun-ichiro Iemura, Tohru Natsume, Kenji Takehana, Naoyuki Yamada,[...]. Mol Biol Cell 2009
6

Trehalose induces autophagy via lysosomal-mediated TFEB activation in models of motoneuron degeneration.
Paola Rusmini, Katia Cortese, Valeria Crippa, Riccardo Cristofani, Maria Elena Cicardi, Veronica Ferrari, Giulia Vezzoli, Barbara Tedesco, Marco Meroni, Elio Messi,[...]. Autophagy 2019
175
6

mTOR at the nexus of nutrition, growth, ageing and disease.
Grace Y Liu, David M Sabatini. Nat Rev Mol Cell Biol 2020
805
6

Lysosomes as a therapeutic target.
Srinivasa Reddy Bonam, Fengjuan Wang, Sylviane Muller. Nat Rev Drug Discov 2019
198
6

mTOR Signaling in Growth, Metabolism, and Disease.
Robert A Saxton, David M Sabatini. Cell 2017
5

Molecular genetics and cellular features of TFE3 and TFEB fusion kidney cancers.
Eric C Kauffman, Christopher J Ricketts, Soroush Rais-Bahrami, Youfeng Yang, Maria J Merino, Donald P Bottaro, Ramaprasad Srinivasan, W Marston Linehan. Nat Rev Urol 2014
179
5

Autophagy fights disease through cellular self-digestion.
Noboru Mizushima, Beth Levine, Ana Maria Cuervo, Daniel J Klionsky. Nature 2008
5

Transcriptional activation of RagD GTPase controls mTORC1 and promotes cancer growth.
Chiara Di Malta, Diletta Siciliano, Alessia Calcagni, Jlenia Monfregola, Simona Punzi, Nunzia Pastore, Andrea N Eastes, Oliver Davis, Rossella De Cegli, Angela Zampelli,[...]. Science 2017
124
5

Increased expression of transcription factor EB (TFEB) is associated with autophagy, migratory phenotype and poor prognosis in non-small cell lung cancer.
Alexandra Giatromanolaki, Dimitra Kalamida, Efthimios Sivridis, Ilias V Karagounis, Kevin C Gatter, Adrian L Harris, Michael I Koukourakis. Lung Cancer 2015
64
7

Transcription Factor EB Controls Metabolic Flexibility during Exercise.
Gelsomina Mansueto, Andrea Armani, Carlo Viscomi, Luca D'Orsi, Rossella De Cegli, Elena V Polishchuk, Costanza Lamperti, Ivano Di Meo, Vanina Romanello, Silvia Marchet,[...]. Cell Metab 2017
177
5

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.