A citation-based method for searching scientific literature

Alexander A Shishkin, Irina Voineagu, Robert Matera, Nicole Cherng, Brook T Chernet, Maria M Krasilnikova, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Mol Cell 2009
Times Cited: 99







List of co-cited articles
1623 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Chromosome fragility at GAA tracts in yeast depends on repeat orientation and requires mismatch repair.
Hyun-Min Kim, Vidhya Narayanan, Piotr A Mieczkowski, Thomas D Petes, Maria M Krasilnikova, Sergei M Mirkin, Kirill S Lobachev. EMBO J 2008
77
53

Replication stalling at Friedreich's ataxia (GAA)n repeats in vivo.
Maria M Krasilnikova, Sergei M Mirkin. Mol Cell Biol 2004
143
35

SRS2 and SGS1 prevent chromosomal breaks and stabilize triplet repeats by restraining recombination.
Alix Kerrest, Ranjith P Anand, Rangapriya Sundararajan, Rodrigo Bermejo, Giordano Liberi, Bernard Dujon, Catherine H Freudenreich, Guy-Franck Richard. Nat Struct Mol Biol 2009
77
41


Expansion and length-dependent fragility of CTG repeats in yeast.
C H Freudenreich, S M Kantrow, V A Zakian. Science 1998
346
30

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
608
29

Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion.
V Campuzano, L Montermini, M D Moltò, L Pianese, M Cossée, F Cavalcanti, E Monros, F Rodius, F Duclos, A Monticelli,[...]. Science 1996
28

Expansions, contractions, and fragility of the spinocerebellar ataxia type 10 pentanucleotide repeat in yeast.
Nicole Cherng, Alexander A Shishkin, Lucas I Schlager, Ryan H Tuck, Laura Sloan, Robert Matera, Partha S Sarkar, Tetsuo Ashizawa, Catherine H Freudenreich, Sergei M Mirkin. Proc Natl Acad Sci U S A 2011
37
75

Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility.
Irina Voineagu, Christine F Surka, Alexander A Shishkin, Maria M Krasilnikova, Sergei M Mirkin. Nat Struct Mol Biol 2009
91
27

Replication and expansion of trinucleotide repeats in yeast.
Richard Pelletier, Maria M Krasilnikova, George M Samadashwily, Robert Lahue, Sergei M Mirkin. Mol Cell Biol 2003
123
24

Role of DNA polymerases in repeat-mediated genome instability.
Kartik A Shah, Alexander A Shishkin, Irina Voineagu, Youri I Pavlov, Polina V Shcherbakova, Sergei M Mirkin. Cell Rep 2012
45
53

OGG1 initiates age-dependent CAG trinucleotide expansion in somatic cells.
Irina V Kovtun, Yuan Liu, Magnar Bjoras, Arne Klungland, Samuel H Wilson, Cynthia T McMurray. Nature 2007
324
22



Genome-wide screen identifies pathways that govern GAA/TTC repeat fragility and expansions in dividing and nondividing yeast cells.
Yu Zhang, Alexander A Shishkin, Yuri Nishida, Dana Marcinkowski-Desmond, Natalie Saini, Kirill V Volkov, Sergei M Mirkin, Kirill S Lobachev. Mol Cell 2012
47
46

Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins.
Irina Voineagu, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Proc Natl Acad Sci U S A 2008
172
21


Replication-dependent instability at (CTG) x (CAG) repeat hairpins in human cells.
Guoqi Liu, Xiaomi Chen, John J Bissler, Richard R Sinden, Michael Leffak. Nat Chem Biol 2010
106
20

Replication fork stalling at natural impediments.
Ekaterina V Mirkin, Sergei M Mirkin. Microbiol Mol Biol Rev 2007
355
19

The balancing act of DNA repeat expansions.
Jane C Kim, Sergei M Mirkin. Curr Opin Genet Dev 2013
72
26

Postreplication repair inhibits CAG.CTG repeat expansions in Saccharomyces cerevisiae.
Danielle L Daee, Tony Mertz, Robert S Lahue. Mol Cell Biol 2007
49
36

Repeat instability during DNA repair: Insights from model systems.
Karen Usdin, Nealia C M House, Catherine H Freudenreich. Crit Rev Biochem Mol Biol 2015
101
18

(CAG)(n)-hairpin DNA binds to Msh2-Msh3 and changes properties of mismatch recognition.
Barbara A L Owen, Zungyoon Yang, Maoyi Lai, Maciej Gajec, John D Badger, Jeffrey J Hayes, Winfried Edelmann, Raju Kucherlapati, Teresa M Wilson, Cynthia T McMurray. Nat Struct Mol Biol 2005
162
17


Trinucleotide repeats that expand in human disease form hairpin structures in vitro.
A M Gacy, G Goellner, N Juranić, S Macura, C T McMurray. Cell 1995
466
17

Overcoming natural replication barriers: differential helicase requirements.
Ranjith P Anand, Kartik A Shah, Hengyao Niu, Patrick Sung, Sergei M Mirkin, Catherine H Freudenreich. Nucleic Acids Res 2012
60
28

Mutations in yeast replication proteins that increase CAG/CTG expansions also increase repeat fragility.
Julie L Callahan, Kenneth J Andrews, Virginia A Zakian, Catherine H Freudenreich. Mol Cell Biol 2003
83
19

Friedreich's ataxia-associated GAA repeats induce replication-fork reversal and unusual molecular junctions.
Cindy Follonier, Judith Oehler, Raquel Herrador, Massimo Lopes. Nat Struct Mol Biol 2013
56
28


CTG repeat instability and size variation timing in DNA repair-deficient mice.
Cédric Savouret, Edith Brisson, Jeroen Essers, Roland Kanaar, Albert Pastink, Hein te Riele, Claudine Junien, Geneviève Gourdon. EMBO J 2003
146
15


Repeat instability as the basis for human diseases and as a potential target for therapy.
Arturo López Castel, John D Cleary, Christopher E Pearson. Nat Rev Mol Cell Biol 2010
293
15


Transcription promotes contraction of CAG repeat tracts in human cells.
Yunfu Lin, Vincent Dion, John H Wilson. Nat Struct Mol Biol 2006
121
14



R loops stimulate genetic instability of CTG.CAG repeats.
Yunfu Lin, Sharon Y R Dent, John H Wilson, Robert D Wells, Marek Napierala. Proc Natl Acad Sci U S A 2010
125
14

Trinucleotide repeats affect DNA replication in vivo.
G M Samadashwily, G Raca, S M Mirkin. Nat Genet 1997
261
14

Sticky DNA: self-association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia.
N Sakamoto, P D Chastain, P Parniewski, K Ohshima, M Pandolfo, J D Griffith, R D Wells. Mol Cell 1999
234
13



Mrc1, Tof1 and Csm3 inhibit CAG.CTG repeat instability by at least two mechanisms.
David F Razidlo, Robert S Lahue. DNA Repair (Amst) 2008
32
40

Progressive GAA.TTC repeat expansion in human cell lines.
Scott Ditch, Mimi C Sammarco, Ayan Banerjee, Ed Grabczyk. PLoS Genet 2009
51
25

Effects of Friedreich's ataxia (GAA)n*(TTC)n repeats on RNA synthesis and stability.
Maria M Krasilnikova, Maria L Kireeva, Vladimir Petrovic, Nelli Knijnikova, Mikhail Kashlev, Sergei M Mirkin. Nucleic Acids Res 2007
42
30

Friedreich's ataxia (GAA)n•(TTC)n repeats strongly stimulate mitotic crossovers in Saccharomyces cerevisae.
Wei Tang, Margaret Dominska, Patricia W Greenwell, Zachary Harvanek, Kirill S Lobachev, Hyun-Min Kim, Vidhya Narayanan, Sergei M Mirkin, Thomas D Petes. PLoS Genet 2011
36
36

Altered replication in human cells promotes DMPK (CTG)(n) · (CAG)(n) repeat instability.
Guoqi Liu, Xiaomi Chen, Yanzhe Gao, Todd Lewis, Joanna Barthelemy, Michael Leffak. Mol Cell Biol 2012
33
39

Role of mismatch repair enzymes in GAA·TTC triplet-repeat expansion in Friedreich ataxia induced pluripotent stem cells.
Jintang Du, Erica Campau, Elisabetta Soragni, Sherman Ku, James W Puckett, Peter B Dervan, Joel M Gottesfeld. J Biol Chem 2012
76
17

The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
50
26

Trinucleotide repeat disorders.
Harry T Orr, Huda Y Zoghbi. Annu Rev Neurosci 2007
972
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.