A citation-based method for searching scientific literature

Leslie G Biesecker, James C Mullikin, Flavia M Facio, Clesson Turner, Praveen F Cherukuri, Robert W Blakesley, Gerard G Bouffard, Peter S Chines, Pedro Cruz, Nancy F Hansen, Jamie K Teer, Baishali Maskeri, Alice C Young, Teri A Manolio, Alexander F Wilson, Toren Finkel, Paul Hwang, Andrew Arai, Alan T Remaley, Vandana Sachdev, Robert Shamburek, Richard O Cannon, Eric D Green. Genome Res 2009
Times Cited: 201







List of co-cited articles
287 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
19

Intentions to receive individual results from whole-genome sequencing among participants in the ClinSeq study.
Flavia M Facio, Haley Eidem, Tyler Fisher, Stephanie Brooks, Amy Linn, Kimberly A Kaphingst, Leslie G Biesecker, Barbara B Biesecker. Eur J Hum Genet 2013
121
17

Motivators for participation in a whole-genome sequencing study: implications for translational genomics research.
Flavia M Facio, Stephanie Brooks, Johanna Loewenstein, Susannah Green, Leslie G Biesecker, Barbara B Biesecker. Eur J Hum Genet 2011
96
15

Characterizing Participants in the ClinSeq Genome Sequencing Cohort as Early Adopters of a New Health Technology.
Katie L Lewis, Paul K J Han, Gillian W Hooker, William M P Klein, Leslie G Biesecker, Barbara B Biesecker. PLoS One 2015
32
40

An integrated map of genetic variation from 1,092 human genomes.
Goncalo R Abecasis, Adam Auton, Lisa D Brooks, Mark A DePristo, Richard M Durbin, Robert E Handsaker, Hyun Min Kang, Gabor T Marth, Gil A McVean. Nature 2012
12

Diagnostic clinical genome and exome sequencing.
Leslie G Biesecker, Robert C Green. N Engl J Med 2014
339
12

The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine.
Jason L Vassy, Denise M Lautenbach, Heather M McLaughlin, Sek Won Kong, Kurt D Christensen, Joel Krier, Isaac S Kohane, Lindsay Z Feuerman, Jennifer Blumenthal-Barby, J Scott Roberts,[...]. Trials 2014
97
10

A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
9

Secondary variants in individuals undergoing exome sequencing: screening of 572 individuals identifies high-penetrance mutations in cancer-susceptibility genes.
Jennifer J Johnston, Wendy S Rubinstein, Flavia M Facio, David Ng, Larry N Singh, Jamie K Teer, James C Mullikin, Leslie G Biesecker. Am J Hum Genet 2012
157
9

A general framework for estimating the relative pathogenicity of human genetic variants.
Martin Kircher, Daniela M Witten, Preti Jain, Brian J O'Roak, Gregory M Cooper, Jay Shendure. Nat Genet 2014
9

Preferences for results delivery from exome sequencing/genome sequencing.
Martha F Wright, Katie L Lewis, Tyler C Fisher, Gillian W Hooker, Toby E Emanuel, Leslie G Biesecker, Barbara B Biesecker. Genet Med 2014
41
21

Effects of informed consent for individual genome sequencing on relevant knowledge.
K A Kaphingst, F M Facio, M-R Cheng, S Brooks, H Eidem, A Linn, B B Biesecker, L G Biesecker. Clin Genet 2012
78
11


Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
9

Information Avoidance Tendencies, Threat Management Resources, and Interest in Genetic Sequencing Feedback.
Jennifer M Taber, William M P Klein, Rebecca A Ferrer, Katie L Lewis, Peter R Harris, James A Shepperd, Leslie G Biesecker. Ann Behav Med 2015
27
29

The role of current affect, anticipated affect and spontaneous self-affirmation in decisions to receive self-threatening genetic risk information.
Rebecca A Ferrer, Jennifer M Taber, William M P Klein, Peter R Harris, Katie L Lewis, Leslie G Biesecker. Cogn Emot 2015
23
34

Dispositional optimism and perceived risk interact to predict intentions to learn genome sequencing results.
Jennifer M Taber, William M P Klein, Rebecca A Ferrer, Katie L Lewis, Leslie G Biesecker, Barbara B Biesecker. Health Psychol 2015
18
44

A brief assessment of concerns associated with genetic testing for cancer: the Multidimensional Impact of Cancer Risk Assessment (MICRA) questionnaire.
David Cella, Chanita Hughes, Amy Peterman, Chih-Hung Chang, Beth N Peshkin, Marc D Schwartz, Lari Wenzel, Amy Lemke, Alfred C Marcus, Caryn Lerman. Health Psychol 2002
162
8

Individualized iterative phenotyping for genome-wide analysis of loss-of-function mutations.
Jennifer J Johnston, Katie L Lewis, David Ng, Larry N Singh, Jamila Wynter, Carmen Brewer, Brian P Brooks, Isaac Brownell, Fabio Candotti, Steven G Gonsalves,[...]. Am J Hum Genet 2015
46
17

Motivations, concerns and preferences of personal genome sequencing research participants: Baseline findings from the HealthSeq project.
Saskia C Sanderson, Michael D Linderman, Sabrina A Suckiel, George A Diaz, Randi E Zinberg, Kadija Ferryman, Melissa Wasserstein, Andrew Kasarskis, Eric E Schadt. Eur J Hum Genet 2016
45
17

Perceived ambiguity as a barrier to intentions to learn genome sequencing results.
Jennifer M Taber, William M P Klein, Rebecca A Ferrer, Paul K J Han, Katie L Lewis, Leslie G Biesecker, Barbara B Biesecker. J Behav Med 2015
28
25

Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics.
Sarah S Kalia, Kathy Adelman, Sherri J Bale, Wendy K Chung, Christine Eng, James P Evans, Gail E Herman, Sophia B Hufnagel, Teri E Klein, Bruce R Korf,[...]. Genet Med 2017
783
7

How do research participants perceive "uncertainty" in genome sequencing?
Barbara B Biesecker, William Klein, Katie L Lewis, Tyler C Fisher, Martha Frances Wright, Leslie G Biesecker, Paul K Han. Genet Med 2014
49
12

VarSifter: visualizing and analyzing exome-scale sequence variation data on a desktop computer.
Jamie K Teer, Eric D Green, James C Mullikin, Leslie G Biesecker. Bioinformatics 2012
109
6

Lynch syndrome patients' views of and preferences for return of results following whole exome sequencing.
Kelly Hitch, Galen Joseph, Jenna Guiltinan, Jessica Kianmahd, Janey Youngblom, Amie Blanco. J Genet Couns 2014
42
14

A framework for variation discovery and genotyping using next-generation DNA sequencing data.
Mark A DePristo, Eric Banks, Ryan Poplin, Kiran V Garimella, Jared R Maguire, Christopher Hartl, Anthony A Philippakis, Guillermo del Angel, Manuel A Rivas, Matt Hanna,[...]. Nat Genet 2011
6

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
6

A new initiative on precision medicine.
Francis S Collins, Harold Varmus. N Engl J Med 2015
6

Return of genomic results to research participants: the floor, the ceiling, and the choices in between.
Gail P Jarvik, Laura M Amendola, Jonathan S Berg, Kyle Brothers, Ellen W Clayton, Wendy Chung, Barbara J Evans, James P Evans, Stephanie M Fullerton, Carlos J Gallego,[...]. Am J Hum Genet 2014
234
6

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
6





Attitudes of African Americans toward return of results from exome and whole genome sequencing.
Joon-Ho Yu, Julia Crouch, Seema M Jamal, Holly K Tabor, Michael J Bamshad. Am J Med Genet A 2013
55
9

Attitudes of non-African American focus group participants toward return of results from exome and whole genome sequencing.
Joon-Ho Yu, Julia Crouch, Seema M Jamal, Michael J Bamshad, Holly K Tabor. Am J Med Genet A 2014
35
14

Clinical interpretation and implications of whole-genome sequencing.
Frederick E Dewey, Megan E Grove, Cuiping Pan, Benjamin A Goldstein, Jonathan A Bernstein, Hassan Chaib, Jason D Merker, Rachel L Goldfeder, Gregory M Enns, Sean P David,[...]. JAMA 2014
282
5

Social and behavioral research in genomic sequencing: approaches from the Clinical Sequencing Exploratory Research Consortium Outcomes and Measures Working Group.
Stacy W Gray, Yolanda Martins, Lindsay Z Feuerman, Barbara A Bernhardt, Barbara B Biesecker, Kurt D Christensen, Steven Joffe, Christine Rini, David Veenstra, Amy L McGuire. Genet Med 2014
43
11


Recommendations for returning genomic incidental findings? We need to talk!
Wylie Burke, Armand H Matheny Antommaria, Robin Bennett, Jeffrey Botkin, Ellen Wright Clayton, Gail E Henderson, Ingrid A Holm, Gail P Jarvik, Muin J Khoury, Bartha Maria Knoppers,[...]. Genet Med 2013
211
5


Interpreting secondary cardiac disease variants in an exome cohort.
David Ng, Jennifer J Johnston, Jamie K Teer, Larry N Singh, Lindsey C Peller, Jamila S Wynter, Katie L Lewis, David N Cooper, Peter D Stenson, James C Mullikin,[...]. Circ Cardiovasc Genet 2013
54
9

Participant use and communication of findings from exome sequencing: a mixed-methods study.
Katie L Lewis, Gillian W Hooker, Philip D Connors, Travis C Hyams, Martha F Wright, Samantha Caldwell, Leslie G Biesecker, Barbara B Biesecker. Genet Med 2016
40
12

Oncologists' and cancer patients' views on whole-exome sequencing and incidental findings: results from the CanSeq study.
Stacy W Gray, Elyse R Park, Julie Najita, Yolanda Martins, Lara Traeger, Elizabeth Bair, Joshua Gagne, Judy Garber, Pasi A J√§nne, Neal Lindeman,[...]. Genet Med 2016
68
7

Health behavior changes after genetic risk assessment for Alzheimer disease: The REVEAL Study.
Serena Chao, J Scott Roberts, Theresa M Marteau, Rebecca Silliman, L Adrienne Cupples, Robert C Green. Alzheimer Dis Assoc Disord 2008
150
4

A systematic approach to the reporting of medically relevant findings from whole genome sequencing.
Heather M McLaughlin, Ozge Ceyhan-Birsoy, Kurt D Christensen, Isaac S Kohane, Joel Krier, William J Lane, Denise Lautenbach, Matthew S Lebo, Kalotina Machini, Calum A MacRae,[...]. BMC Med Genet 2014
60
6

Varieties of uncertainty in health care: a conceptual taxonomy.
Paul K J Han, William M P Klein, Neeraj K Arora. Med Decis Making 2011
187
4

Evaluating the utility of personal genomic information.
Morris W Foster, John J Mulvihill, Richard R Sharp. Genet Med 2009
123
4

MutationTaster evaluates disease-causing potential of sequence alterations.
Jana Marie Schwarz, Christian R√∂delsperger, Markus Schuelke, Dominik Seelow. Nat Methods 2010
4

Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing.
Jamie K Teer, Lori L Bonnycastle, Peter S Chines, Nancy F Hansen, Natsuyo Aoyama, Amy J Swift, Hatice Ozel Abaan, Thomas J Albert, Elliott H Margulies, Eric D Green,[...]. Genome Res 2010
158
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.