A citation-based method for searching scientific literature

Allison C Lamanna, Katrin Karbstein. Proc Natl Acad Sci U S A 2009
Times Cited: 98







List of co-cited articles
938 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1.
Brigitte Pertschy, Claudia Schneider, Marén Gnädig, Thorsten Schäfer, David Tollervey, Ed Hurt. J Biol Chem 2009
138
51

Nob1p is required for cleavage of the 3' end of 18S rRNA.
Alessandro Fatica, Marlene Oeffinger, Mensur Dlakić, David Tollervey. Mol Cell Biol 2003
110
39

PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNA.
Alessandro Fatica, David Tollervey, Mensur Dlakić. RNA 2004
92
40

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
154
24

An RNA conformational switch regulates pre-18S rRNA cleavage.
Allison C Lamanna, Katrin Karbstein. J Mol Biol 2011
43
51

Proofreading of pre-40S ribosome maturation by a translation initiation factor and 60S subunits.
Simon Lebaron, Claudia Schneider, Robert W van Nues, Agata Swiatkowska, Dietrich Walsh, Bettina Böttcher, Sander Granneman, Nicholas J Watkins, David Tollervey. Nat Struct Mol Biol 2012
122
22

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes.
Thorsten Schäfer, Daniela Strauss, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2003
238
21

Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking.
Sander Granneman, Elisabeth Petfalski, Agata Swiatkowska, David Tollervey. EMBO J 2010
104
21

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
408
20



Structural and functional analysis of the archaeal endonuclease Nob1.
Thomas Veith, Roman Martin, Jan P Wurm, Benjamin L Weis, Elke Duchardt-Ferner, Charlotta Safferthal, Raoul Hennig, Oliver Mirus, Markus T Bohnsack, Jens Wöhnert,[...]. Nucleic Acids Res 2012
50
40

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
20

Cloning, expression and characterization of the human NOB1 gene.
Yue Zhang, Jun Ni, Guangjin Zhou, Jian Yuan, Weihua Ren, Yuxi Shan, Wenwen Tang, Long Yu, Shouyuan Zhao. Mol Biol Rep 2005
35
54

Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit.
Thorsten Schäfer, Bohumil Maco, Elisabeth Petfalski, David Tollervey, Bettina Böttcher, Ueli Aebi, Ed Hurt. Nature 2006
161
18

The putative NTPase Fap7 mediates cytoplasmic 20S pre-rRNA processing through a direct interaction with Rps14.
Sander Granneman, Madhusudan R Nandineni, Susan J Baserga. Mol Cell Biol 2005
77
23

Distinct cytoplasmic maturation steps of 40S ribosomal subunit precursors require hRio2.
Ivo Zemp, Thomas Wild, Marie-Françoise O'Donohue, Franziska Wandrey, Barbara Widmann, Pierre-Emmanuel Gleizes, Ulrike Kutay. J Cell Biol 2009
106
17

Roles of Dim2 in ribosome assembly.
Heather A Woolls, Allison C Lamanna, Katrin Karbstein. J Biol Chem 2011
31
54

A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.
Bethany S Strunk, Megan N Novak, Crystal L Young, Katrin Karbstein. Cell 2012
170
17

Rio1 mediates ATP-dependent final maturation of 40S ribosomal subunits.
Tomasz W Turowski, Simon Lebaron, Elodie Zhang, Lauri Peil, Tatiana Dudnakova, Elisabeth Petfalski, Sander Granneman, Juri Rappsilber, David Tollervey. Nucleic Acids Res 2014
59
28

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
517
16

Nob1p, a new essential protein, associates with the 26S proteasome of growing saccharomyces cerevisiae cells.
Y Tone, N Tanahashi, K Tanaka, M Fujimuro, H Yokosawa, A Toh-e. Gene 2000
45
35


The PINc domain protein Utp24, a putative nuclease, is required for the early cleavage steps in 18S rRNA maturation.
Franziska Bleichert, Sander Granneman, Yvonne N Osheim, Ann L Beyer, Susan J Baserga. Proc Natl Acad Sci U S A 2006
68
22

The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
14

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
367
14

Ribosome assembly in eukaryotes.
Micheline Fromont-Racine, Bruno Senger, Cosmin Saveanu, Franco Fasiolo. Gene 2003
450
14

Late cytoplasmic maturation of the small ribosomal subunit requires RIO proteins in Saccharomyces cerevisiae.
Emmanuel Vanrobays, Jean-Paul Gelugne, Pierre-Emmanuel Gleizes, Michele Caizergues-Ferrer. Mol Cell Biol 2003
100
14

Powering through ribosome assembly.
Bethany S Strunk, Katrin Karbstein. RNA 2009
141
14


The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
14

Ribosome synthesis in Saccharomyces cerevisiae.
J Venema, D Tollervey. Annu Rev Genet 1999
618
13

Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
332
13

Analysis of the in vivo assembly pathway of eukaryotic 40S ribosomal proteins.
Sébastien Ferreira-Cerca, Gisela Pöll, Holger Kühn, Andreas Neueder, Steffen Jakob, Herbert Tschochner, Philipp Milkereit. Mol Cell 2007
106
13

Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae.
Yvonne N Osheim, Sarah L French, Kristin M Keck, Erica A Champion, Krasimir Spasov, François Dragon, Susan J Baserga, Ann L Beyer. Mol Cell 2004
194
12

The carboxy-terminal extension of yeast ribosomal protein S14 is necessary for maturation of 43S preribosomes.
Jelena Jakovljevic, Pamela Antúnez de Mayolo, Tiffany D Miles, Theresa Mai-Ly Nguyen, Isabelle Léger-Silvestre, Nicole Gas, John L Woolford. Mol Cell 2004
71
16


An essential GTPase promotes assembly of preribosomal RNA processing complexes.
Katrin Karbstein, Stefanie Jonas, Jennifer A Doudna. Mol Cell 2005
62
17

60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm.
Tracy A Nissan, Jochen Bassler, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2002
279
11

The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.
Jorge Pérez-Fernández, Angel Román, Javier De Las Rivas, Xosé R Bustelo, Mercedes Dosil. Mol Cell Biol 2007
123
11

Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function.
Sébastien Ferreira-Cerca, Gisela Pöll, Pierre-Emmanuel Gleizes, Herbert Tschochner, Philipp Milkereit. Mol Cell 2005
216
11

Identification of protein binding sites on U3 snoRNA and pre-rRNA by UV cross-linking and high-throughput analysis of cDNAs.
Sander Granneman, Grzegorz Kudla, Elisabeth Petfalski, David Tollervey. Proc Natl Acad Sci U S A 2009
224
11

Prp43 bound at different sites on the pre-rRNA performs distinct functions in ribosome synthesis.
Markus T Bohnsack, Roman Martin, Sander Granneman, Maike Ruprecht, Enrico Schleiff, David Tollervey. Mol Cell 2009
122
11

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
11

Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex.
Filip Glavan, Isabelle Behm-Ansmant, Elisa Izaurralde, Elena Conti. EMBO J 2006
138
11

Endonucleolytic RNA cleavage by a eukaryotic exosome.
Alice Lebreton, Rafal Tomecki, Andrzej Dziembowski, Bertrand Séraphin. Nature 2008
239
11

Rational extension of the ribosome biogenesis pathway using network-guided genetics.
Zhihua Li, Insuk Lee, Emily Moradi, Nai-Jung Hung, Arlen W Johnson, Edward M Marcotte. PLoS Biol 2009
123
11

Distant structural homology leads to the functional characterization of an archaeal PIN domain as an exonuclease.
Vickery L Arcus, Kristina Bäckbro, Annette Roos, Emma L Daniel, Edward N Baker. J Biol Chem 2004
91
12

Downregulation of NIN/RPN12 binding protein inhibit the growth of human hepatocellular carcinoma cells.
Zaiming Lu, Qiyong Guo, Aizhong Shi, Feng Xie, Qingjie Lu. Mol Biol Rep 2012
22
50

Expression of the NOB1 gene and its clinical significance in papillary thyroid carcinoma.
Shan Lin, Wei Meng, Wei Zhang, Jia Liu, Peisong Wang, Shuai Xue, Guang Chen. J Int Med Res 2013
18
61


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.