A citation-based method for searching scientific literature

Jian Zhang, Gary J Olsen. RNA 2009
Times Cited: 10







List of co-cited articles
89 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability.
Dominik Jäger, Cynthia M Sharma, Jens Thomsen, Claudia Ehlers, Jörg Vogel, Ruth A Schmitz. Proc Natl Acad Sci U S A 2009
140
50

RNomics in Archaea reveals a further link between splicing of archaeal introns and rRNA processing.
Thean Hock Tang, Timofey S Rozhdestvensky, Béatrice Clouet d'Orval, Marie-Line Bortolin, Harald Huber, Bruno Charpentier, Christiane Branlant, Jean-Pierre Bachellerie, Jürgen Brosius, Alexander Hüttenhofer. Nucleic Acids Res 2002
88
40

Maturation and degradation of ribosomal RNA in bacteria.
Murray P Deutscher. Prog Mol Biol Transl Sci 2009
114
40




The archaeal exosome core is a hexameric ring structure with three catalytic subunits.
Esben Lorentzen, Pamela Walter, Sebastien Fribourg, Elena Evguenieva-Hackenberg, Gabriele Klug, Elena Conti. Nat Struct Mol Biol 2005
172
30

Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1.
Roula Daou-Chabo, Nathalie Mathy, Lionel Bénard, Ciarán Condon. Mol Microbiol 2009
48
30

Translation initiation factor a/eIF2(-gamma) counteracts 5' to 3' mRNA decay in the archaeon Sulfolobus solfataricus.
David Hasenöhrl, Tania Lombo, Vladimir Kaberdin, Paola Londei, Udo Bläsi. Proc Natl Acad Sci U S A 2008
41
30

Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.
Sergine Even, Olivier Pellegrini, Lena Zig, Valerie Labas, Joelle Vinh, Dominique Bréchemmier-Baey, Harald Putzer. Nucleic Acids Res 2005
231
30

When all's zed and done: the structure and function of RNase Z in prokaryotes.
Yulia Redko, Inés Li de la Sierra-Gallay, Ciarán Condon. Nat Rev Microbiol 2007
49
30




Assigning a function to a conserved group of proteins: the tRNA 3'-processing enzymes.
Steffen Schiffer, Sylvia Rösch, Anita Marchfelder. EMBO J 2002
136
30

Transcription and translation are coupled in Archaea.
Sarah L French, Thomas J Santangelo, Ann L Beyer, John N Reeve. Mol Biol Evol 2007
56
30


RNA degradation in Archaea and Gram-negative bacteria different from Escherichia coli.
Elena Evguenieva-Hackenberg, Gabriele Klug. Prog Mol Biol Transl Sci 2009
39
30

Structural insights into the dual activity of RNase J.
Inés Li de la Sierra-Gallay, Léna Zig, Ailar Jamalli, Harald Putzer. Nat Struct Mol Biol 2008
132
30

Universal RNA-degrading enzymes in Archaea: Prevalence, activities and functions of β-CASP ribonucleases.
Béatrice Clouet-d'Orval, Duy Khanh Phung, Petra S Langendijk-Genevaux, Yves Quentin. Biochimie 2015
12
30


Genome-wide mRNA processing in methanogenic archaea reveals post-transcriptional regulation of ribosomal protein synthesis.
Lei Qi, Lei Yue, Deqin Feng, Fengxia Qi, Jie Li, Xiuzhu Dong. Nucleic Acids Res 2017
14
30

The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn.
Sophie Nolivos, Agamemnon J Carpousis, Béatrice Clouet-d'Orval. Nucleic Acids Res 2005
63
20

Comparative genomics and evolution of proteins involved in RNA metabolism.
Vivek Anantharaman, Eugene V Koonin, L Aravind. Nucleic Acids Res 2002
362
20


Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.
Anastasia J Callaghan, Maria Jose Marcaida, Jonathan A Stead, Kenneth J McDowall, William G Scott, Ben F Luisi. Nature 2005
205
20



Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1.
Robert A Britton, Tingyi Wen, Laura Schaefer, Olivier Pellegrini, William C Uicker, Nathalie Mathy, Crystal Tobin, Roula Daou, Jacek Szyk, Ciarán Condon. Mol Microbiol 2007
113
20

In vitro RNP assembly and methylation guide activity of an unusual box C/D RNA, cis-acting archaeal pre-tRNA(Trp).
Marie-Line Bortolin, Jean-Pierre Bachellerie, Béatrice Clouet-d'Orval. Nucleic Acids Res 2003
40
20


Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family.
Isabelle Callebaut, Despina Moshous, Jean-Paul Mornon, Jean-Pierre de Villartay. Nucleic Acids Res 2002
233
20

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
20

Catalytic activation of multimeric RNase E and RNase G by 5'-monophosphorylated RNA.
Xunqing Jiang, Joel G Belasco. Proc Natl Acad Sci U S A 2004
96
20

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes.
Jason Carte, Ruiying Wang, Hong Li, Rebecca M Terns, Michael P Terns. Genes Dev 2008
365
20

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA.
Nathalie Mathy, Lionel Bénard, Olivier Pellegrini, Roula Daou, Tingyi Wen, Ciarán Condon. Cell 2007
253
20


The Pyrococcus exosome complex: structural and functional characterization.
Celso Raul Romero Ramos, Cristiano L P Oliveira, Iris L Torriani, Carla Columbano Oliveira. J Biol Chem 2006
34
20

Mechanism of mRNA destabilization by the glmS ribozyme.
Jennifer A Collins, Irnov Irnov, Stephanie Baker, Wade C Winkler. Genes Dev 2007
161
20



Hfq and its constellation of RNA.
Jörg Vogel, Ben F Luisi. Nat Rev Microbiol 2011
675
20

The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex.
Martin Lehnik-Habrink, Henrike Pförtner, Leonie Rempeters, Nico Pietack, Christina Herzberg, Jörg Stülke. Mol Microbiol 2010
103
20

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal.
Helena Celesnik, Atilio Deana, Joel G Belasco. Mol Cell 2007
184
20



RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis.
Karen Shahbabian, Ailar Jamalli, Léna Zig, Harald Putzer. EMBO J 2009
173
20

Euryarchaeal beta-CASP proteins with homology to bacterial RNase J Have 5'- to 3'-exoribonuclease activity.
Béatrice Clouet-d'Orval, Dana Rinaldi, Yves Quentin, Agamemnon J Carpousis. J Biol Chem 2010
35
20

The small RNA IstR inhibits synthesis of an SOS-induced toxic peptide.
Jörg Vogel, Liron Argaman, E Gerhart H Wagner, Shoshy Altuvia. Curr Biol 2004
186
20



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.