A citation-based method for searching scientific literature

Katja A Lamia, Uma M Sachdeva, Luciano DiTacchio, Elliot C Williams, Jacqueline G Alvarez, Daniel F Egan, Debbie S Vasquez, Henry Juguilon, Satchidananda Panda, Reuben J Shaw, Craig B Thompson, Ronald M Evans. Science 2009
Times Cited: 577







List of co-cited articles
1712 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
948
41

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
913
40

A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
32



Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1.
Yasukazu Nakahata, Saurabh Sahar, Giuseppe Astarita, Milota Kaluzova, Paolo Sassone-Corsi. Science 2009
802
25

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
23

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
859
23

Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.
Kathryn Moynihan Ramsey, Jun Yoshino, Cynthia S Brace, Dana Abrassart, Yumiko Kobayashi, Biliana Marcheva, Hee-Kyung Hong, Jason L Chong, Ethan D Buhr, Choogon Lee,[...]. Science 2009
750
22

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
22

Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet.
Megumi Hatori, Christopher Vollmers, Amir Zarrinpar, Luciano DiTacchio, Eric A Bushong, Shubhroz Gill, Mathias Leblanc, Amandine Chaix, Matthew Joens, James A J Fitzpatrick,[...]. Cell Metab 2012
994
22

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
20

Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
20

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
357
19

Circadian Clock Interaction with HIF1α Mediates Oxygenic Metabolism and Anaerobic Glycolysis in Skeletal Muscle.
Clara Bien Peek, Daniel C Levine, Jonathan Cedernaes, Akihiko Taguchi, Yumiko Kobayashi, Stacy J Tsai, Nicolle A Bonar, Maureen R McNulty, Kathryn Moynihan Ramsey, Joseph Bass. Cell Metab 2017
172
19

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
646
18

Role of the CLOCK protein in the mammalian circadian mechanism.
N Gekakis, D Staknis, H B Nguyen, F C Davis, L D Wilsbacher, D P King, J S Takahashi, C J Weitz. Science 1998
18

Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.
Biliana Marcheva, Kathryn Moynihan Ramsey, Ethan D Buhr, Yumiko Kobayashi, Hong Su, Caroline H Ko, Ganka Ivanova, Chiaki Omura, Shelley Mo, Martha H Vitaterna,[...]. Nature 2010
935
18

Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.
Christopher Vollmers, Shubhroz Gill, Luciano DiTacchio, Sandhya R Pulivarthy, Hiep D Le, Satchidananda Panda. Proc Natl Acad Sci U S A 2009
454
18

Entrainment of the circadian clock in the liver by feeding.
K A Stokkan, S Yamazaki, H Tei, Y Sakaki, M Menaker. Science 2001
18

Activation of 5'-AMP-activated kinase with diabetes drug metformin induces casein kinase Iepsilon (CKIepsilon)-dependent degradation of clock protein mPer2.
Jee Hyun Um, Shutong Yang, Shin Yamazaki, Hyeog Kang, Benoit Viollet, Marc Foretz, Jay H Chung. J Biol Chem 2007
156
18

High-fat diet disrupts behavioral and molecular circadian rhythms in mice.
Akira Kohsaka, Aaron D Laposky, Kathryn Moynihan Ramsey, Carmela Estrada, Corinne Joshu, Yumiko Kobayashi, Fred W Turek, Joseph Bass. Cell Metab 2007
930
18

Cryptochrome mediates circadian regulation of cAMP signaling and hepatic gluconeogenesis.
Eric E Zhang, Yi Liu, Renaud Dentin, Pagkapol Y Pongsawakul, Andrew C Liu, Tsuyoshi Hirota, Dmitri A Nusinow, Xiujie Sun, Severine Landais, Yuzo Kodama,[...]. Nat Med 2010
345
17

mTOR signaling regulates central and peripheral circadian clock function.
Chidambaram Ramanathan, Nimish D Kathale, Dong Liu, Choogon Lee, David A Freeman, John B Hogenesch, Ruifeng Cao, Andrew C Liu. PLoS Genet 2018
92
18

Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression.
Sandra M Siepka, Seung-Hee Yoo, Junghea Park, Weimin Song, Vivek Kumar, Yinin Hu, Choogon Lee, Joseph S Takahashi. Cell 2007
384
16

Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation.
Erik J Eide, Margaret F Woolf, Heeseog Kang, Peter Woolf, William Hurst, Fernando Camacho, Erica L Vielhaber, Andrew Giovanni, David M Virshup. Mol Cell Biol 2005
348
16

mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop.
K Kume, M J Zylka, S Sriram, L P Shearman, D R Weaver, X Jin, E S Maywood, M H Hastings, S M Reppert. Cell 1999
16

Circadian integration of metabolism and energetics.
Joseph Bass, Joseph S Takahashi. Science 2010
16

Resetting of circadian time in peripheral tissues by glucocorticoid signaling.
A Balsalobre, S A Brown, L Marcacci, F Tronche, C Kellendonk, H M Reichardt, G Schütz, U Schibler. Science 2000
16

Extensive and divergent circadian gene expression in liver and heart.
Kai-Florian Storch, Ovidiu Lipan, Igor Leykin, N Viswanathan, Fred C Davis, Wing H Wong, Charles J Weitz. Nature 2002
15

Posttranslational mechanisms regulate the mammalian circadian clock.
C Lee, J P Etchegaray, F R Cagampang, A S Loudon, S M Reppert. Cell 2001
835
15

The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome.
Baokun He, Kazunari Nohara, Noheon Park, Yong-Sung Park, Bobby Guillory, Zhaoyang Zhao, Jose M Garcia, Nobuya Koike, Cheng Chi Lee, Joseph S Takahashi,[...]. Cell Metab 2016
239
15

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
387
15

Coordination of circadian timing in mammals.
Steven M Reppert, David R Weaver. Nature 2002
15

Circadian physiology of metabolism.
Satchidananda Panda. Science 2016
405
15

Time-Restricted Feeding Prevents Obesity and Metabolic Syndrome in Mice Lacking a Circadian Clock.
Amandine Chaix, Terry Lin, Hiep D Le, Max W Chang, Satchidananda Panda. Cell Metab 2019
222
15

Time-restricted feeding is a preventative and therapeutic intervention against diverse nutritional challenges.
Amandine Chaix, Amir Zarrinpar, Phuong Miu, Satchidananda Panda. Cell Metab 2014
450
15

Circadian regulator CLOCK is a histone acetyltransferase.
Masao Doi, Jun Hirayama, Paolo Sassone-Corsi. Cell 2006
583
14

SCFFbxl3 controls the oscillation of the circadian clock by directing the degradation of cryptochrome proteins.
Luca Busino, Florian Bassermann, Alessio Maiolica, Choogon Lee, Patrick M Nolan, Sofia I H Godinho, Giulio F Draetta, Michele Pagano. Science 2007
358
14

Autophagy Regulates the Liver Clock and Glucose Metabolism by Degrading CRY1.
Miriam Toledo, Ana Batista-Gonzalez, Emilio Merheb, Marie Louise Aoun, Elena Tarabra, Daorong Feng, Jaakko Sarparanta, Paola Merlo, Francesco Botrè, Gary J Schwartz,[...]. Cell Metab 2018
77
18

Physiological significance of a peripheral tissue circadian clock.
Katja A Lamia, Kai-Florian Storch, Charles J Weitz. Proc Natl Acad Sci U S A 2008
706
14

Insulin/IGF-1 Drives PERIOD Synthesis to Entrain Circadian Rhythms with Feeding Time.
Priya Crosby, Ryan Hamnett, Marrit Putker, Nathaniel P Hoyle, Martin Reed, Carolyn J Karam, Elizabeth S Maywood, Alessandra Stangherlin, Johanna E Chesham, Edward A Hayter,[...]. Cell 2019
116
14

Circadian clocks and insulin resistance.
Dirk Jan Stenvers, Frank A J L Scheer, Patrick Schrauwen, Susanne E la Fleur, Andries Kalsbeek. Nat Rev Endocrinol 2019
197
14

The Circadian Protein BMAL1 Regulates Translation in Response to S6K1-Mediated Phosphorylation.
Jonathan O Lipton, Elizabeth D Yuan, Lara M Boyle, Darius Ebrahimi-Fakhari, Erica Kwiatkowski, Ashwin Nathan, Thomas Güttler, Fred Davis, John M Asara, Mustafa Sahin. Cell 2015
196
14

Molecular architecture of the mammalian circadian clock.
Carrie L Partch, Carla B Green, Joseph S Takahashi. Trends Cell Biol 2014
729
14

Post-translational modifications regulate the ticking of the circadian clock.
Monica Gallego, David M Virshup. Nat Rev Mol Cell Biol 2007
553
14

CLOCK-mediated acetylation of BMAL1 controls circadian function.
Jun Hirayama, Saurabh Sahar, Benedetto Grimaldi, Teruya Tamaru, Ken Takamatsu, Yasukazu Nakahata, Paolo Sassone-Corsi. Nature 2007
353
13

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.
Trey K Sato, Satchidananda Panda, Loren J Miraglia, Teresa M Reyes, Radu D Rudic, Peter McNamara, Kinnery A Naik, Garret A FitzGerald, Steve A Kay, John B Hogenesch. Neuron 2004
717
13

Mammalian Cry1 and Cry2 are essential for maintenance of circadian rhythms.
G T van der Horst, M Muijtjens, K Kobayashi, R Takano, S Kanno, M Takao, J de Wit, A Verkerk, A P Eker, D van Leenen,[...]. Nature 1999
976
13

A transcription factor response element for gene expression during circadian night.
Hiroki R Ueda, Wenbin Chen, Akihito Adachi, Hisanori Wakamatsu, Satoko Hayashi, Tomohiro Takasugi, Mamoru Nagano, Ken-ichi Nakahama, Yutaka Suzuki, Sumio Sugano,[...]. Nature 2002
638
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.