A citation-based method for searching scientific literature

Kim Nasmyth, Christian H Haering. Annu Rev Genet 2009
Times Cited: 696







List of co-cited articles
1051 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cohesin Loss Eliminates All Loop Domains.
Suhas S P Rao, Su-Chen Huang, Brian Glenn St Hilaire, Jesse M Engreitz, Elizabeth M Perez, Kyong-Rim Kieffer-Kwon, Adrian L Sanborn, Sarah E Johnstone, Gavin D Bascom, Ivan D Bochkov,[...]. Cell 2017
821
27

Two independent modes of chromatin organization revealed by cohesin removal.
Wibke Schwarzer, Nezar Abdennur, Anton Goloborodko, Aleksandra Pekowska, Geoffrey Fudenberg, Yann Loe-Mie, Nuno A Fonseca, Wolfgang Huber, Christian H Haering, Leonid Mirny,[...]. Nature 2017
533
26

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
24

Human cohesin compacts DNA by loop extrusion.
Yoori Kim, Zhubing Shi, Hongshan Zhang, Ilya J Finkelstein, Hongtao Yu. Science 2019
258
22

Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins.
R Ciosk, M Shirayama, A Shevchenko, T Tanaka, A Toth, A Shevchenko, K Nasmyth. Mol Cell 2000
522
21

Formation of Chromosomal Domains by Loop Extrusion.
Geoffrey Fudenberg, Maxim Imakaev, Carolyn Lu, Anton Goloborodko, Nezar Abdennur, Leonid A Mirny. Cell Rep 2016
873
21

DNA loop extrusion by human cohesin.
Iain F Davidson, Benedikt Bauer, Daniela Goetz, Wen Tang, Gordana Wutz, Jan-Michael Peters. Science 2019
293
21

Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
Gordana Wutz, Csilla Várnai, Kota Nagasaka, David A Cisneros, Roman R Stocsits, Wen Tang, Stefan Schoenfelder, Gregor Jessberger, Matthias Muhar, M Julius Hossain,[...]. EMBO J 2017
351
20

The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension.
Judith H I Haarhuis, Robin H van der Weide, Vincent A Blomen, J Omar Yáñez-Cuna, Mario Amendola, Marjon S van Ruiten, Peter H L Krijger, Hans Teunissen, René H Medema, Bas van Steensel,[...]. Cell 2017
380
20

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
20

Mediator and cohesin connect gene expression and chromatin architecture.
Michael H Kagey, Jamie J Newman, Steve Bilodeau, Ye Zhan, David A Orlando, Nynke L van Berkum, Christopher C Ebmeier, Jesse Goossens, Peter B Rahl, Stuart S Levine,[...]. Nature 2010
18

Wapl controls the dynamic association of cohesin with chromatin.
Stephanie Kueng, Björn Hegemann, Beate H Peters, Jesse J Lipp, Alexander Schleiffer, Karl Mechtler, Jan-Michael Peters. Cell 2006
409
17

Wapl is an essential regulator of chromatin structure and chromosome segregation.
Antonio Tedeschi, Gordana Wutz, Sébastien Huet, Markus Jaritz, Annelie Wuensche, Erika Schirghuber, Iain Finley Davidson, Wen Tang, David A Cisneros, Venugopal Bhaskara,[...]. Nature 2013
191
16


Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
16

Cohesin mediates transcriptional insulation by CCCTC-binding factor.
Kerstin S Wendt, Keisuke Yoshida, Takehiko Itoh, Masashige Bando, Birgit Koch, Erika Schirghuber, Shuichi Tsutsumi, Genta Nagae, Ko Ishihara, Tsuyoshi Mishiro,[...]. Nature 2008
843
15

Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Elphège P Nora, Bryan R Lajoie, Edda G Schulz, Luca Giorgetti, Ikuhiro Okamoto, Nicolas Servant, Tristan Piolot, Nynke L van Berkum, Johannes Meisig, John Sedat,[...]. Nature 2012
15

Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.
Elphège P Nora, Anton Goloborodko, Anne-Laure Valton, Johan H Gibcus, Alec Uebersohn, Nezar Abdennur, Job Dekker, Leonid A Mirny, Benoit G Bruneau. Cell 2017
772
15

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.
Adrian L Sanborn, Suhas S P Rao, Su-Chen Huang, Neva C Durand, Miriam H Huntley, Andrew I Jewett, Ivan D Bochkov, Dharmaraj Chinnappan, Ashok Cutkosky, Jian Li,[...]. Proc Natl Acad Sci U S A 2015
882
14

SMC complexes: from DNA to chromosomes.
Frank Uhlmann. Nat Rev Mol Cell Biol 2016
294
14

Eco1-dependent cohesin acetylation during establishment of sister chromatid cohesion.
Tom Rolef Ben-Shahar, Sebastian Heeger, Chris Lehane, Philip East, Helen Flynn, Mark Skehel, Frank Uhlmann. Science 2008
363
13

The cohesin complex and its roles in chromosome biology.
Jan-Michael Peters, Antonio Tedeschi, Julia Schmitz. Genes Dev 2008
341
13

CTCF and Cohesin in Genome Folding and Transcriptional Gene Regulation.
Matthias Merkenschlager, Elphège P Nora. Annu Rev Genomics Hum Genet 2016
279
12

Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl.
Georg A Busslinger, Roman R Stocsits, Petra van der Lelij, Elin Axelsson, Antonio Tedeschi, Niels Galjart, Jan-Michael Peters. Nature 2017
225
12

Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation.
Sergi Cuartero, Felix D Weiss, Gopuraja Dharmalingam, Ya Guo, Elizabeth Ing-Simmons, Silvia Masella, Irene Robles-Rebollo, Xiaolin Xiao, Yi-Fang Wang, Iros Barozzi,[...]. Nat Immunol 2018
109
12

A pathway for mitotic chromosome formation.
Johan H Gibcus, Kumiko Samejima, Anton Goloborodko, Itaru Samejima, Natalia Naumova, Johannes Nuebler, Masato T Kanemaki, Linfeng Xie, James R Paulson, William C Earnshaw,[...]. Science 2018
325
12

Real-time imaging of DNA loop extrusion by condensin.
Mahipal Ganji, Indra A Shaltiel, Shveta Bisht, Eugene Kim, Ana Kalichava, Christian H Haering, Cees Dekker. Science 2018
340
12

Cohesin's DNA exit gate is distinct from its entrance gate and is regulated by acetylation.
Kok-Lung Chan, Maurici B Roig, Bin Hu, Frédéric Beckouët, Jean Metson, Kim Nasmyth. Cell 2012
165
11

A molecular determinant for the establishment of sister chromatid cohesion.
Elçin Unal, Jill M Heidinger-Pauli, Woong Kim, Vincent Guacci, Itay Onn, Steven P Gygi, Douglas E Koshland. Science 2008
329
11

Sororin mediates sister chromatid cohesion by antagonizing Wapl.
Tomoko Nishiyama, Rene Ladurner, Julia Schmitz, Emanuel Kreidl, Alexander Schleiffer, Venugopal Bhaskara, Masashige Bando, Katsuhiko Shirahige, Anthony A Hyman, Karl Mechtler,[...]. Cell 2010
248
11

Organizational principles of 3D genome architecture.
M Jordan Rowley, Victor G Corces. Nat Rev Genet 2018
445
11

The cohesin ring concatenates sister DNA molecules.
Christian H Haering, Ana-Maria Farcas, Prakash Arumugam, Jean Metson, Kim Nasmyth. Nature 2008
332
10

The condensin complex is a mechanochemical motor that translocates along DNA.
Tsuyoshi Terakawa, Shveta Bisht, Jorine M Eeftens, Cees Dekker, Christian H Haering, Eric C Greene. Science 2017
178
10

Molecular architecture of SMC proteins and the yeast cohesin complex.
Christian H Haering, Jan Löwe, Andreas Hochwagen, Kim Nasmyth. Mol Cell 2002
544
10

Scc2 Is a Potent Activator of Cohesin's ATPase that Promotes Loading by Binding Scc1 without Pds5.
Naomi J Petela, Thomas G Gligoris, Jean Metson, Byung-Gil Lee, Menelaos Voulgaris, Bin Hu, Sotaro Kikuchi, Christophe Chapard, Wentao Chen, Eeson Rajendra,[...]. Mol Cell 2018
68
14

CTCF and cohesin regulate chromatin loop stability with distinct dynamics.
Anders S Hansen, Iryna Pustova, Claudia Cattoglio, Robert Tjian, Xavier Darzacq. Elife 2017
276
10

Building sister chromatid cohesion: smc3 acetylation counteracts an antiestablishment activity.
Benjamin D Rowland, Maurici B Roig, Tatsuya Nishino, Alexander Kurze, Pelin Uluocak, Ajay Mishra, Frédéric Beckouët, Philippa Underwood, Jean Metson, Richard Imre,[...]. Mol Cell 2009
232
9

Cohesins functionally associate with CTCF on mammalian chromosome arms.
Vania Parelho, Suzana Hadjur, Mikhail Spivakov, Marion Leleu, Stephan Sauer, Heather C Gregson, Adam Jarmuz, Claudia Canzonetta, Zoe Webster, Tatyana Nesterova,[...]. Cell 2008
653
9

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.
Jessica Zuin, Jesse R Dixon, Michael I J A van der Reijden, Zhen Ye, Petros Kolovos, Rutger W W Brouwer, Mariëtte P C van de Corput, Harmen J G van de Werken, Tobias A Knoch, Wilfred F J van IJcken,[...]. Proc Natl Acad Sci U S A 2014
515
9

Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms.
Ayana Kon, Lee-Yung Shih, Masashi Minamino, Masashi Sanada, Yuichi Shiraishi, Yasunobu Nagata, Kenichi Yoshida, Yusuke Okuno, Masashige Bando, Ryuichiro Nakato,[...]. Nat Genet 2013
263
9



The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms.
Madhusudhan Srinivasan, Johanna C Scheinost, Naomi J Petela, Thomas G Gligoris, Maria Wissler, Sugako Ogushi, James E Collier, Menelaos Voulgaris, Alexander Kurze, Kok-Lung Chan,[...]. Cell 2018
68
13

The Energetics and Physiological Impact of Cohesin Extrusion.
Laura Vian, Aleksandra Pękowska, Suhas S P Rao, Kyong-Rim Kieffer-Kwon, Seolkyoung Jung, Laura Baranello, Su-Chen Huang, Laila El Khattabi, Marei Dose, Nathanael Pruett,[...]. Cell 2018
205
9

Sister chromatid cohesion.
Jan-Michael Peters, Tomoko Nishiyama. Cold Spring Harb Perspect Biol 2012
122
9

Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
9



A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Johanna Gassler, Hugo B Brandão, Maxim Imakaev, Ilya M Flyamer, Sabrina Ladstätter, Wendy A Bickmore, Jan-Michael Peters, Leonid A Mirny, Kikuë Tachibana. EMBO J 2017
181
9

Self-organization of domain structures by DNA-loop-extruding enzymes.
Elnaz Alipour, John F Marko. Nucleic Acids Res 2012
274
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.