A citation-based method for searching scientific literature

Elena Dreosti, Benjamin Odermatt, Mario M Dorostkar, Leon Lagnado. Nat Methods 2009
Times Cited: 143







List of co-cited articles
1118 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
34

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
33


An expanded palette of genetically encoded Ca²⁺ indicators.
Yongxin Zhao, Satoko Araki, Jiahui Wu, Takayuki Teramoto, Yu-Fen Chang, Masahiro Nakano, Ahmed S Abdelfattah, Manabi Fujiwara, Takeshi Ishihara, Takeharu Nagai,[...]. Science 2011
730
22

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
698
21

An optimized fluorescent probe for visualizing glutamate neurotransmission.
Jonathan S Marvin, Bart G Borghuis, Lin Tian, Joseph Cichon, Mark T Harnett, Jasper Akerboom, Andrew Gordus, Sabine L Renninger, Tsai-Wen Chen, Cornelia I Bargmann,[...]. Nat Methods 2013
436
19

Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.
A Miyawaki, J Llopis, R Heim, J M McCaffery, J A Adams, M Ikura, R Y Tsien. Nature 1997
18


Encoding of luminance and contrast by linear and nonlinear synapses in the retina.
Benjamin Odermatt, Anton Nikolaev, Leon Lagnado. Neuron 2012
53
28

Computational processing of optical measurements of neuronal and synaptic activity in networks.
Mario M Dorostkar, Elena Dreosti, Benjamin Odermatt, Leon Lagnado. J Neurosci Methods 2010
55
25

Parametric functional maps of visual inputs to the tectum.
Nikolas Nikolaou, Andrew S Lowe, Alison S Walker, Fatima Abbas, Paul R Hunter, Ian D Thompson, Martin P Meyer. Neuron 2012
98
14

Genetic visualization with an improved GCaMP calcium indicator reveals spatiotemporal activation of the spinal motor neurons in zebrafish.
Akira Muto, Masamichi Ohkura, Tomoya Kotani, Shin-ichi Higashijima, Junichi Nakai, Koichi Kawakami. Proc Natl Acad Sci U S A 2011
121
13

Spontaneous network activity visualized by ultrasensitive Ca(2+) indicators, yellow Cameleon-Nano.
Kazuki Horikawa, Yoshiyuki Yamada, Tomoki Matsuda, Kentarou Kobayashi, Mitsuhiro Hashimoto, Toru Matsu-ura, Atsushi Miyawaki, Takayuki Michikawa, Katsuhiko Mikoshiba, Takeharu Nagai. Nat Methods 2010
230
13

Characterization and subcellular targeting of GCaMP-type genetically-encoded calcium indicators.
Tianyi Mao, Daniel H O'Connor, Volker Scheuss, Junichi Nakai, Karel Svoboda. PLoS One 2008
106
13

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B Orger, Kristen E Severi, John J Macklin,[...]. Front Mol Neurosci 2013
384
13

Imaging cellular signals in the heart in vivo: Cardiac expression of the high-signal Ca2+ indicator GCaMP2.
Yvonne N Tallini, Masamichi Ohkura, Bum-Rak Choi, Guangju Ji, Keiji Imoto, Robert Doran, Jane Lee, Patricia Plan, Jason Wilson, Hong-Bo Xin,[...]. Proc Natl Acad Sci U S A 2006
311
12

Expanded dynamic range of fluorescent indicators for Ca(2+) by circularly permuted yellow fluorescent proteins.
Takeharu Nagai, Shuichi Yamada, Takashi Tominaga, Michinori Ichikawa, Atsushi Miyawaki. Proc Natl Acad Sci U S A 2004
725
12

Homeostatic synaptic plasticity through changes in presynaptic calcium influx.
CongJian Zhao, Elena Dreosti, Leon Lagnado. J Neurosci 2011
76
15

Clathrin-mediated endocytosis is the dominant mechanism of vesicle retrieval at hippocampal synapses.
Björn Granseth, Benjamin Odermatt, Stephen J Royle, Leon Lagnado. Neuron 2006
440
12

ScanImage: flexible software for operating laser scanning microscopes.
Thomas A Pologruto, Bernardo L Sabatini, Karel Svoboda. Biomed Eng Online 2003
673
12

Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
588
12

Synaptic mechanisms of adaptation and sensitization in the retina.
Anton Nikolaev, Kin-Mei Leung, Benjamin Odermatt, Leon Lagnado. Nat Neurosci 2013
51
23

A genetically encoded calcium indicator for chronic in vivo two-photon imaging.
Marco Mank, Alexandre Ferrão Santos, Stephan Direnberger, Thomas D Mrsic-Flogel, Sonja B Hofer, Valentin Stein, Thomas Hendel, Dierk F Reiff, Christiaan Levelt, Alexander Borst,[...]. Nat Methods 2008
314
11

Spikes in retinal bipolar cells phase-lock to visual stimuli with millisecond precision.
Tom Baden, Federico Esposti, Anton Nikolaev, Leon Lagnado. Curr Biol 2011
46
23


Olfactory stimulation selectively modulates the OFF pathway in the retina of zebrafish.
Federico Esposti, Jamie Johnston, Juliana M Rosa, Kin-Mei Leung, Leon Lagnado. Neuron 2013
25
44

Targeting neural circuitry in zebrafish using GAL4 enhancer trapping.
Ethan K Scott, Lindsay Mason, Aristides B Arrenberg, Limor Ziv, Nathan J Gosse, Tong Xiao, Neil C Chi, Kazuhide Asakawa, Koichi Kawakami, Herwig Baier. Nat Methods 2007
261
10

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
352
10

Filtering of visual information in the tectum by an identified neural circuit.
Filippo Del Bene, Claire Wyart, Estuardo Robles, Amanda Tran, Loren Looger, Ethan K Scott, Ehud Y Isacoff, Herwig Baier. Science 2010
155
9

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
9

Concurrent imaging of synaptic vesicle recycling and calcium dynamics.
Haiyan Li, Sarah M Foss, Yuriy L Dobryy, C Kevin Park, Samuel Andrew Hires, Nathan C Shaner, Roger Y Tsien, Leslie C Osborne, Susan M Voglmaier. Front Mol Neurosci 2011
46
19


In vivo evidence that retinal bipolar cells generate spikes modulated by light.
Elena Dreosti, Federico Esposti, Tom Baden, Leon Lagnado. Nat Neurosci 2011
43
20

Activity in motor-sensory projections reveals distributed coding in somatosensation.
Leopoldo Petreanu, Diego A Gutnisky, Daniel Huber, Ning-long Xu, Dan H O'Connor, Lin Tian, Loren Looger, Karel Svoboda. Nature 2012
198
9

Functional imaging in the zebrafish retinotectal system using RGECO.
Alison S Walker, Juan Burrone, Martin P Meyer. Front Neural Circuits 2013
31
29

Real-time visualization of neuronal activity during perception.
Akira Muto, Masamichi Ohkura, Gembu Abe, Junichi Nakai, Koichi Kawakami. Curr Biol 2013
130
9

Bipolar cell-photoreceptor connectivity in the zebrafish (Danio rerio) retina.
Yong N Li, Taro Tsujimura, Shoji Kawamura, John E Dowling. J Comp Neurol 2012
38
23

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
258
9

Monitoring neural activity with bioluminescence during natural behavior.
Eva A Naumann, Adam R Kampff, David A Prober, Alexander F Schier, Florian Engert. Nat Neurosci 2010
125
8

A genetically targeted optical sensor to monitor calcium signals in astrocyte processes.
Eiji Shigetomi, Sebastian Kracun, Michael V Sofroniew, Baljit S Khakh. Nat Neurosci 2010
154
8

Ca2+ indicators based on computationally redesigned calmodulin-peptide pairs.
Amy E Palmer, Marta Giacomello, Tanja Kortemme, S Andrew Hires, Varda Lev-Ram, David Baker, Roger Y Tsien. Chem Biol 2006
344
8

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
684
8

nacre encodes a zebrafish microphthalmia-related protein that regulates neural-crest-derived pigment cell fate.
J A Lister, C P Robertson, T Lepage, S L Johnson, D W Raible. Development 1999
518
8

The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs.
Kristen M Kwan, Esther Fujimoto, Clemens Grabher, Benjamin D Mangum, Melissa E Hardy, Douglas S Campbell, John M Parant, H Joseph Yost, John P Kanki, Chi-Bin Chien. Dev Dyn 2007
8


A Cre-dependent GCaMP3 reporter mouse for neuronal imaging in vivo.
Hatim A Zariwala, Bart G Borghuis, Tycho M Hoogland, Linda Madisen, Lin Tian, Chris I De Zeeuw, Hongkui Zeng, Loren L Looger, Karel Svoboda, Tsai-Wen Chen. J Neurosci 2012
236
8

Multiple dynamic representations in the motor cortex during sensorimotor learning.
D Huber, D A Gutnisky, S Peron, D H O'Connor, J S Wiegert, L Tian, T G Oertner, L L Looger, K Svoboda. Nature 2012
281
8


The neuronal organization of the retina.
Richard H Masland. Neuron 2012
411
8

Optical control of zebrafish behavior with halorhodopsin.
Aristides B Arrenberg, Filippo Del Bene, Herwig Baier. Proc Natl Acad Sci U S A 2009
159
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.