A citation-based method for searching scientific literature

Amit Thakar, Jeffrey D Parvin, Jordanka Zlatanova. J Biomol Struct Dyn 2010
Times Cited: 40







List of co-cited articles
519 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Activation of the E3 ligase function of the BRCA1/BARD1 complex by polyubiquitin chains.
Donna L Mallery, Cassandra J Vandenberg, Kevin Hiom. EMBO J 2002
223
35

The RING heterodimer BRCA1-BARD1 is a ubiquitin ligase inactivated by a breast cancer-derived mutation.
R Hashizume, M Fukuda, I Maeda, H Nishikawa, D Oyake, Y Yabuki, H Ogata, T Ohta. J Biol Chem 2001
523
32

BRCA1 tumour suppression occurs via heterochromatin-mediated silencing.
Quan Zhu, Gerald M Pao, Alexis M Huynh, Hoonkyo Suh, Nina Tonnu, Petra M Nederlof, Fred H Gage, Inder M Verma. Nature 2011
322
27

Enhancement of BRCA1 E3 ubiquitin ligase activity through direct interaction with the BARD1 protein.
Yan Xia, Gerald M Pao, Hong-Wu Chen, Inder M Verma, Tony Hunter. J Biol Chem 2003
167
25

Requirement of ATM-dependent monoubiquitylation of histone H2B for timely repair of DNA double-strand breaks.
Lilach Moyal, Yaniv Lerenthal, Mali Gana-Weisz, Gilad Mass, Sairei So, Shih-Ya Wang, Berina Eppink, Young Min Chung, Gil Shalev, Efrat Shema,[...]. Mol Cell 2011
275
25

RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells.
Jaehoon Kim, Mohamed Guermah, Robert K McGinty, Jung-Shin Lee, Zhanyun Tang, Thomas A Milne, Ali Shilatifard, Tom W Muir, Robert G Roeder. Cell 2009
348
25

Human BRCA1-BARD1 ubiquitin ligase activity counteracts chromatin barriers to DNA resection.
Ruth M Densham, Alexander J Garvin, Helen R Stone, Joanna Strachan, Robert A Baldock, Manuel Daza-Martin, Alice Fletcher, Sarah Blair-Reid, James Beesley, Balraj Johal,[...]. Nat Struct Mol Biol 2016
161
25


Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells.
Neri Minsky, Efrat Shema, Yair Field, Meromit Schuster, Eran Segal, Moshe Oren. Nat Cell Biol 2008
260
22

Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II.
Rushad Pavri, Bing Zhu, Guohong Li, Patrick Trojer, Subhrangsu Mandal, Ali Shilatifard, Danny Reinberg. Cell 2006
520
22


BRCA1 is a histone-H2A-specific ubiquitin ligase.
Reinhard Kalb, Donna L Mallery, Conor Larkin, Jeffrey T J Huang, Kevin Hiom. Cell Rep 2014
95
22

Identification of a RING protein that can interact in vivo with the BRCA1 gene product.
L C Wu, Z W Wang, J T Tsan, M A Spillman, A Phung, X L Xu, M C Yang, L Y Hwang, A M Bowcock, R Baer. Nat Genet 1996
580
20

Regulation of homologous recombination by RNF20-dependent H2B ubiquitination.
Kyosuke Nakamura, Akihiro Kato, Junya Kobayashi, Hiromi Yanagihara, Shuichi Sakamoto, Douglas V N P Oliveira, Mikio Shimada, Hiroshi Tauchi, Hidekazu Suzuki, Satoshi Tashiro,[...]. Mol Cell 2011
249
20

Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation.
Bing Zhu, Yong Zheng, Anh-Dung Pham, Subhrangsu S Mandal, Hediye Erdjument-Bromage, Paul Tempst, Danny Reinberg. Mol Cell 2005
347
20

CDK9 directs H2B monoubiquitination and controls replication-dependent histone mRNA 3'-end processing.
Judith Pirngruber, Andrei Shchebet, Lisa Schreiber, Efrat Shema, Neri Minsky, Rob D Chapman, Dirk Eick, Yael Aylon, Moshe Oren, Steven A Johnsen. EMBO Rep 2009
128
20

The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression.
Efrat Shema, Itay Tirosh, Yael Aylon, Jing Huang, Chaoyang Ye, Neta Moskovits, Nina Raver-Shapira, Neri Minsky, Judith Pirngruber, Gabi Tarcic,[...]. Genes Dev 2008
197
20

RNF20 and USP44 regulate stem cell differentiation by modulating H2B monoubiquitylation.
Gilad Fuchs, Efrat Shema, Rita Vesterman, Eran Kotler, Zohar Wolchinsky, Sylvia Wilder, Lior Golomb, Ariel Pribluda, Feng Zhang, Mahmood Haj-Yahya,[...]. Mol Cell 2012
146
20


BRCA1/BARD1 ubiquitinate phosphorylated RNA polymerase II.
Lea M Starita, Andrew A Horwitz, Michael-Christopher Keogh, Chikashi Ishioka, Jeffrey D Parvin, Natsuko Chiba. J Biol Chem 2005
109
17

Structure of a BRCA1-BARD1 heterodimeric RING-RING complex.
P S Brzovic, P Rajagopal, D W Hoyt, M C King, R E Klevit. Nat Struct Biol 2001
374
17

The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression.
Xiao-Yong Zhang, Maya Varthi, Stephen M Sykes, Charles Phillips, Claude Warzecha, Wenting Zhu, Anastasia Wyce, Alan W Thorne, Shelley L Berger, Steven B McMahon. Mol Cell 2008
308
17

Mammalian SWI/SNF--a subunit BAF250/ARID1 is an E3 ubiquitin ligase that targets histone H2B.
Xuan Shirley Li, Patrick Trojer, Tatsushi Matsumura, Jessica E Treisman, Naoko Tanese. Mol Cell Biol 2010
83
17


The enigmatic role of H2Bub1 in cancer.
Steven A Johnsen. FEBS Lett 2012
61
17

Writing and reading H2B monoubiquitylation.
Gilad Fuchs, Moshe Oren. Biochim Biophys Acta 2014
75
17

Distinct roles of BARD1 isoforms in mitosis: full-length BARD1 mediates Aurora B degradation, cancer-associated BARD1beta scaffolds Aurora B and BRCA2.
Stephan Ryser, Eva Dizin, Charles Edward Jefford, Bénédicte Delaval, Sarantis Gagos, Agni Christodoulidou, Karl-Heinz Krause, Daniel Birnbaum, Irmgard Irminger-Finger. Cancer Res 2009
64
15

Common variations in BARD1 influence susceptibility to high-risk neuroblastoma.
Mario Capasso, Marcella Devoto, Cuiping Hou, Shahab Asgharzadeh, Joseph T Glessner, Edward F Attiyeh, Yael P Mosse, Cecilia Kim, Sharon J Diskin, Kristina A Cole,[...]. Nat Genet 2009
222
15

Autoubiquitination of the BRCA1*BARD1 RING ubiquitin ligase.
Angus Chen, Frida E Kleiman, James L Manley, Toru Ouchi, Zhen-Qiang Pan. J Biol Chem 2002
170
15

Estrogen receptor alpha is a putative substrate for the BRCA1 ubiquitin ligase.
Catherine M Eakin, Michael J Maccoss, Gregory L Finney, Rachel E Klevit. Proc Natl Acad Sci U S A 2007
131
15



Human USP3 is a chromatin modifier required for S phase progression and genome stability.
Francesco Nicassio, Nadia Corrado, Joseph H A Vissers, Liliana B Areces, Steven Bergink, Jurgen A Marteijn, Bart Geverts, Adriaan B Houtsmuller, Wim Vermeulen, Pier Paolo Di Fiore,[...]. Curr Biol 2007
221
15

The BRCA1/BARD1 heterodimer modulates ran-dependent mitotic spindle assembly.
Vladimir Joukov, Aaron C Groen, Tatyana Prokhorova, Ruth Gerson, Erinn White, Alison Rodriguez, Johannes C Walter, David M Livingston. Cell 2006
212
15


GMP synthetase stimulates histone H2B deubiquitylation by the epigenetic silencer USP7.
Jan A van der Knaap, B R Prashanth Kumar, Yuri M Moshkin, Karin Langenberg, Jeroen Krijgsveld, Albert J R Heck, François Karch, C Peter Verrijzer. Mol Cell 2005
192
15

Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability.
Mahesh B Chandrasekharan, Fu Huang, Zu-Wen Sun. Proc Natl Acad Sci U S A 2009
137
15

BRCA1 tumor suppression depends on BRCT phosphoprotein binding, but not its E3 ligase activity.
Reena Shakya, Latarsha J Reid, Colleen R Reczek, Francesca Cole, Dieter Egli, Chyuan-Sheng Lin, Dirk G deRooij, Steffen Hirsch, Kandasamy Ravi, James B Hicks,[...]. Science 2011
174
15

A role for H2B ubiquitylation in DNA replication.
Kelly M Trujillo, Mary Ann Osley. Mol Cell 2012
90
15

The histone H2B monoubiquitination regulatory pathway is required for differentiation of multipotent stem cells.
Oleksandra Karpiuk, Zeynab Najafova, Frank Kramer, Magali Hennion, Christina Galonska, Annekatrin König, Nicolas Snaidero, Tanja Vogel, Andrei Shchebet, Yvonne Begus-Nahrmann,[...]. Mol Cell 2012
90
15

Histone H2B ubiquitylation disrupts local and higher-order chromatin compaction.
Beat Fierz, Champak Chatterjee, Robert K McGinty, Maya Bar-Dagan, Daniel P Raleigh, Tom W Muir. Nat Chem Biol 2011
297
15

The tumor suppressor CDC73 interacts with the ring finger proteins RNF20 and RNF40 and is required for the maintenance of histone 2B monoubiquitination.
Michael A Hahn, Kristie-Ann Dickson, Stuart Jackson, Adele Clarkson, Anthony J Gill, Deborah J Marsh. Hum Mol Genet 2012
62
15

Mass spectrometric and mutational analyses reveal Lys-6-linked polyubiquitin chains catalyzed by BRCA1-BARD1 ubiquitin ligase.
Hiroyuki Nishikawa, Seido Ooka, Ko Sato, Kei Arima, Joji Okamoto, Rachel E Klevit, Mamoru Fukuda, Tomohiko Ohta. J Biol Chem 2004
182
12

Oncogenic BARD1 isoforms expressed in gynecological cancers.
Lin Li, Stephan Ryser, Eva Dizin, Dietmar Pils, Michael Krainer, Charles Edward Jefford, Francesco Bertoni, Robert Zeillinger, Irmgard Irminger-Finger. Cancer Res 2007
52
12

A truncated splice variant of human BARD1 that lacks the RING finger and ankyrin repeats.
Makiko Tsuzuki, Wenwen Wu, Hiroyuki Nishikawa, Ryosuke Hayami, Daisuke Oyake, Yukari Yabuki, Mamoru Fukuda, Tomohiko Ohta. Cancer Lett 2006
27
18

A mechanism for transcriptional repression dependent on the BRCA1 E3 ubiquitin ligase.
Andrew A Horwitz, El Bachir Affar, George F Heine, Yang Shi, Jeffrey D Parvin. Proc Natl Acad Sci U S A 2007
37
13

Binding and recognition in the assembly of an active BRCA1/BARD1 ubiquitin-ligase complex.
Peter S Brzovic, Jennifer R Keeffe, Hiroyuki Nishikawa, Keiko Miyamoto, David Fox, Mamoru Fukuda, Tomohiko Ohta, Rachel Klevit. Proc Natl Acad Sci U S A 2003
268
12

Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase II transcriptional elongation.
Wenlai Zhou, Ping Zhu, Jianxun Wang, Gabriel Pascual, Kenneth A Ohgi, Jean Lozach, Christopher K Glass, Michael G Rosenfeld. Mol Cell 2008
271
12

Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage.
Hengbin Wang, Ling Zhai, Jun Xu, Heui-Yun Joo, Sarah Jackson, Hediye Erdjument-Bromage, Paul Tempst, Yue Xiong, Yi Zhang. Mol Cell 2006
376
12

Functional communication between endogenous BRCA1 and its partner, BARD1, during Xenopus laevis development.
V Joukov, J Chen, E A Fox, J B Green, D M Livingston. Proc Natl Acad Sci U S A 2001
119
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.