A citation-based method for searching scientific literature

Tatiana Domratcheva, Ilme Schlichting. J Am Chem Soc 2009
Times Cited: 38







List of co-cited articles
400 articles co-cited >1



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Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
140
81

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
140
81


Theoretical study on the repair mechanism of the (6-4) photolesion by the (6-4) photolyase.
Keyarash Sadeghian, Marco Bocola, Thomas Merz, Martin Schütz. J Am Chem Soc 2010
50
73

Role of two histidines in the (6-4) photolyase reaction.
K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
97
71

Crystal structure of the T(6-4)C lesion in complex with a (6-4) DNA photolyase and repair of UV-induced (6-4) and Dewar photolesions.
Andreas F Glas, Sabine Schneider, Melanie J Maul, Ulrich Hennecke, Thomas Carell. Chemistry 2009
58
71

Reaction mechanism of (6-4) photolyase.
X Zhao, J Liu, D S Hsu, S Zhao, J S Taylor, A Sancar. J Biol Chem 1997
119
68

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
271
52


Electron-transfer induced repair of 6-4 photoproducts in DNA: a computational study.
O Anders Borg, Leif A Eriksson, Bo Durbeej. J Phys Chem A 2007
33
54

Electron nuclear double resonance differentiates complementary roles for active site histidines in (6-4) photolyase.
Erik Schleicher, Kenichi Hitomi, Christopher W M Kay, Elizabeth D Getzoff, Takeshi Todo, Stefan Weber. J Biol Chem 2007
68
44

Role of the carbonyl group of the (6-4) photoproduct in the (6-4) photolyase reaction.
Junpei Yamamoto, Kenichi Hitomi, Ryosuke Hayashi, Elizabeth D Getzoff, Shigenori Iwai. Biochemistry 2009
20
85

Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
175
42

A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase.
Fanny Masson, Teodoro Laino, Ursula Rothlisberger, Jürg Hutter. Chemphyschem 2009
49
42

Repair of the (6-4) photoproduct by DNA photolyase requires two photons.
Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Pascal Plaza, Klaus Brettel. Angew Chem Int Ed Engl 2013
40
42

A new photoreactivating enzyme that specifically repairs ultraviolet light-induced (6-4)photoproducts.
T Todo, H Takemori, H Ryo, M Ihara, T Matsunaga, O Nikaido, K Sato, T Nomura. Nature 1993
225
39

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
112
39


Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase.
Zheyun Liu, Xunmin Guo, Chuang Tan, Jiang Li, Ya-Ting Kao, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2012
49
36

Characterization of (6-4) photoproduct DNA photolyase.
S T Kim, K Malhotra, C A Smith, J S Taylor, A Sancar. J Biol Chem 1994
104
34

Evidence that the (6-4) photolyase mechanism can proceed through an oxetane intermediate.
Saâdia Asgatay, Christian Petermann, Dominique Harakat, Dominique Guillaume, John-Stephen Taylor, Pascale Clivio. J Am Chem Soc 2008
18
72

Light-driven DNA repair by photolyases.
L O Essen, T Klar. Cell Mol Life Sci 2006
111
34


Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
320
31

UV-induced DNA damage and repair: a review.
Rajeshwar P Sinha, Donat P Häder. Photochem Photobiol Sci 2002
904
31

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
399
31

Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
31

Computational study of thymine dimer radical anion splitting in the self-repair process of duplex DNA.
Fanny Masson, Teodoro Laino, Ivano Tavernelli, Ursula Rothlisberger, Jürg Hutter. J Am Chem Soc 2008
42
28

Computational studies of DNA photolyase.
Christopher B Harrison, Lauren L O'Neil, Olaf Wiest. J Phys Chem A 2005
53
28

Intermolecular Coulombic Decay in Biology: The Initial Electron Detachment from FADH(-) in DNA Photolyases.
Philipp H P Harbach, Matthias Schneider, Shirin Faraji, Andreas Dreuw. J Phys Chem Lett 2013
24
45

Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
26



Physicochemical mechanism of light-driven DNA repair by (6-4) photolyases.
Shirin Faraji, Andreas Dreuw. Annu Rev Phys Chem 2014
34
29

Ultrafast solvation dynamics at binding and active sites of photolyases.
Chih-Wei Chang, Lijun Guo, Ya-Ting Kao, Jiang Li, Chuang Tan, Tanping Li, Chaitanya Saxena, Zheyun Liu, Lijuan Wang, Aziz Sancar,[...]. Proc Natl Acad Sci U S A 2010
56
23

The mechanism of action of DNA photolyases.
T Carell, L T Burgdorf, L M Kundu, M Cichon. Curr Opin Chem Biol 2001
110
23

Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
104
23


DNA (6-4) photolyases reduce Dewar isomers for isomerization into (6-4) lesions.
Andreas F Glas, Emine Kaya, Sabine Schneider, Korbinian Heil, Danila Fazio, Melanie J Maul, Thomas Carell. J Am Chem Soc 2010
29
31

Theoretical study of excitation energy transfer in DNA photolyase.
Xuehe Zheng, Jorge Garcia, Alexei A Stuchebrukhov. J Phys Chem B 2008
21
42


The Protonation States of the Active-Site Histidines in (6-4) Photolyase.
Karmen Condic-Jurkic, Ana-Sunčana Smith, Hendrik Zipse, David M Smith. J Chem Theory Comput 2012
15
60

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
505
23

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
93
21

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
21


Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA.
Stephan Kiontke, Yann Geisselbrecht, Richard Pokorny, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. EMBO J 2011
67
21

Reaction mechanisms of DNA photolyase.
Klaus Brettel, Martin Byrdin. Curr Opin Struct Biol 2010
113
21

Dynamics and mechanism of DNA repair in a biomimetic system: flavin-thymine dimer adduct.
Ya-Ting Kao, Qin-Hua Song, Chaitanya Saxena, Lijuan Wang, Dongping Zhong. J Am Chem Soc 2012
21
38



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.