A citation-based method for searching scientific literature

Kristin S Koutmou, Nathan H Zahler, Jeffrey C Kurz, Frank E Campbell, Michael E Harris, Carol A Fierke. J Mol Biol 2010
Times Cited: 31







List of co-cited articles
382 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
67

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
64

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
186
64




Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
45



Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
154
41

Structural perspective on the activation of RNAse P RNA by protein.
Amy H Buck, Alexei V Kazantsev, Andrew B Dalby, Norman R Pace. Nat Struct Mol Biol 2005
57
41

Ribonuclease P protein structure: evolutionary origins in the translational apparatus.
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998
128
41

The 5' leader of precursor tRNAAsp bound to the Bacillus subtilis RNase P holoenzyme has an extended conformation.
David Rueda, John Hsieh, Jeremy J Day-Storms, Carol A Fierke, Nils G Walter. Biochemistry 2005
44
41

Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P.
Nathan H Zahler, Eric L Christian, Michael E Harris. RNA 2003
65
41

Protein activation of a ribozyme: the role of bacterial RNase P protein.
Amy H Buck, Andrew B Dalby, Alexander W Poole, Alexei V Kazantsev, Norman R Pace. EMBO J 2005
73
38


Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
151
38



High-resolution structure of RNase P protein from Thermotoga maritima.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Richard J Carter, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2003
68
32

Probing the architecture of the B. subtilis RNase P holoenzyme active site by cross-linking and affinity cleavage.
Somashekarappa Niranjanakumari, Jeremy J Day-Storms, Mahiuddin Ahmed, John Hsieh, Nathan H Zahler, Ronald A Venters, Carol A Fierke. RNA 2007
29
34

RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
366
32

The making of tRNAs and more - RNase P and tRNase Z.
Roland K Hartmann, Markus Gössringer, Bettina Späth, Susan Fischer, Anita Marchfelder. Prog Mol Biol Transl Sci 2009
100
32


The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
36
29


Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
70
29

A single Arabidopsis organellar protein has RNase P activity.
Anthony Gobert, Bernard Gutmann, Andreas Taschner, Markus Gössringer, Johann Holzmann, Roland K Hartmann, Walter Rossmanith, Philippe Giegé. Nat Struct Mol Biol 2010
142
29

Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
136
29

A divalent cation stabilizes the active conformation of the B. subtilis RNase P x pre-tRNA complex: a role for an inner-sphere metal ion in RNase P.
John Hsieh, Kristin S Koutmou, David Rueda, Markos Koutmos, Nils G Walter, Carol A Fierke. J Mol Biol 2010
23
39

Hidden specificity in an apparently nonspecific RNA-binding protein.
Ulf-Peter Guenther, Lindsay E Yandek, Courtney N Niland, Frank E Campbell, David Anderson, Vernon E Anderson, Michael E Harris, Eckhard Jankowsky. Nature 2013
60
29

The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA.
C Spitzfaden, N Nicholson, J J Jones, S Guth, R Lehr, C D Prescott, L A Hegg, D S Eggleston. J Mol Biol 2000
78
25

Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Norman R Pace. RNA 2009
36
25


The pre-tRNA nucleotide base and 2'-hydroxyl at N(-1) contribute to fidelity in tRNA processing by RNase P.
Nathan H Zahler, Lei Sun, Eric L Christian, Michael E Harris. J Mol Biol 2005
37
25

Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.
Anna Perederina, Olga Esakova, Chao Quan, Elena Khanova, Andrey S Krasilnikov. EMBO J 2010
41
25

Basis for structural diversity in homologous RNAs.
Andrey S Krasilnikov, Yinghua Xiao, Tao Pan, Alfonso Mondragón. Science 2004
103
25


Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
123
25


Bacterial RNase P: a new view of an ancient enzyme.
Alexei V Kazantsev, Norman R Pace. Nat Rev Microbiol 2006
135
25



Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
23


RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
177
22

Crystal structure of the specificity domain of ribonuclease P.
Andrey S Krasilnikov, Xiaojing Yang, Tao Pan, Alfonso Mondragón. Nature 2003
173
22

Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme.
Hsin-Yue Tsai, Benoît Masquida, Roopa Biswas, Eric Westhof, Venkat Gopalan. J Mol Biol 2003
82
22

Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P.
William P Boomershine, Craig A McElroy, Hsin-Yue Tsai, Ross C Wilson, Venkat Gopalan, Mark P Foster. Proc Natl Acad Sci U S A 2003
39
22

RNase P cleaves transient structures in some riboswitches.
Sidney Altman, Donna Wesolowski, Cecilia Guerrier-Takada, Yong Li. Proc Natl Acad Sci U S A 2005
65
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.