A citation-based method for searching scientific literature

Martin Byrdin, Andras Lukacs, Viruthachalam Thiagarajan, André P M Eker, Klaus Brettel, Marten H Vos. J Phys Chem A 2010
Times Cited: 49







List of co-cited articles
853 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
319
71


Electron hopping through the 15 A triple tryptophan molecular wire in DNA photolyase occurs within 30 ps.
Andras Lukacs, André P M Eker, Martin Byrdin, Klaus Brettel, Marten H Vos. J Am Chem Soc 2008
86
57


Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
101
44

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
44

Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2013
72
42

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
40

Reaction mechanisms of DNA photolyase.
Klaus Brettel, Martin Byrdin. Curr Opin Struct Biol 2010
112
36

Light-induced electron transfer in a cryptochrome blue-light photoreceptor.
Baldissera Giovani, Martin Byrdin, Margaret Ahmad, Klaus Brettel. Nat Struct Biol 2003
194
34

Intraprotein electron transfer and proton dynamics during photoactivation of DNA photolyase from E. coli: review and new insights from an "inverse" deuterium isotope effect.
Martin Byrdin, Valérie Sartor, André P M Eker, Marten H Vos, Corinne Aubert, Klaus Brettel, Paul Mathis. Biochim Biophys Acta 2004
68
32



Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
174
28


Spectro-temporal characterization of the photoactivation mechanism of two new oxidized cryptochrome/photolyase photoreceptors.
Johanna Brazard, Anwar Usman, Fabien Lacombat, Christian Ley, Monique M Martin, Pascal Plaza, Laetitia Mony, Marc Heijde, Gérald Zabulon, Chris Bowler. J Am Chem Soc 2010
53
28

Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA.
Stephan Kiontke, Yann Geisselbrecht, Richard Pokorny, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. EMBO J 2011
67
28

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
26



Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
26

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
111
26

Searching for a photocycle of the cryptochrome photoreceptors.
Bin Liu, Hongtao Liu, Dongping Zhong, Chentao Lin. Curr Opin Plant Biol 2010
113
26

Discovery and functional analysis of a 4th electron-transferring tryptophan conserved exclusively in animal cryptochromes and (6-4) photolyases.
Pavel Müller, Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Klaus Brettel. Chem Commun (Camb) 2015
74
26


Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
228
24

A novel photoreaction mechanism for the circadian blue light photoreceptor Drosophila cryptochrome.
Alex Berndt, Tilman Kottke, Helena Breitkreuz, Radovan Dvorsky, Sven Hennig, Michael Alexander, Eva Wolf. J Biol Chem 2007
146
24

Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
24

What makes the difference between a cryptochrome and DNA photolyase? A spectroelectrochemical comparison of the flavin redox transitions.
Véronique Balland, Martin Byrdin, Andre P M Eker, Margaret Ahmad, Klaus Brettel. J Am Chem Soc 2009
63
24

Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
139
24

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
138
24


Dynamic Determination of Active-Site Reactivity in Semiquinone Photolyase by the Cofactor Photoreduction.
Zheyun Liu, Chuang Tan, Xunmin Guo, Jiang Li, Lijuan Wang, Dongping Zhong. J Phys Chem Lett 2014
16
75

Role of the middle residue in the triple tryptophan electron transfer chain of DNA photolyase: ultrafast spectroscopy of a Trp-->Phe mutant.
Andras Lukacs, André P M Eker, Martin Byrdin, Sandrine Villette, Jie Pan, Klaus Brettel, Marten H Vos. J Phys Chem B 2006
27
40

Tryptophan-accelerated electron flow through proteins.
Crystal Shih, Anna Katrine Museth, Malin Abrahamsson, Ana Maria Blanco-Rodriguez, Angel J Di Bilio, Jawahar Sudhamsu, Brian R Crane, Kate L Ronayne, Mike Towrie, Antonín Vlcek,[...]. Science 2008
283
22

Microsecond light-induced proton transfer to flavin in the blue light sensor plant cryptochrome.
Thomas Langenbacher, Dominik Immeln, Bernhard Dick, Tilman Kottke. J Am Chem Soc 2009
72
22


Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
22

Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
22

Light-induced electron transfer in Arabidopsis cryptochrome-1 correlates with in vivo function.
Anke Zeugner, Martin Byrdin, Jean-Pierre Bouly, Nadia Bakrim, Baldissera Giovani, Klaus Brettel, Margaret Ahmad. J Biol Chem 2005
118
22

A model for photoreceptor-based magnetoreception in birds.
T Ritz, S Adem, K Schulten. Biophys J 2000
582
22

ATP binding turns plant cryptochrome into an efficient natural photoswitch.
Pavel Müller, Jean-Pierre Bouly, Kenichi Hitomi, Véronique Balland, Elizabeth D Getzoff, Thorsten Ritz, Klaus Brettel. Sci Rep 2014
72
22

Polarized transient absorption to resolve electron transfer between tryptophans in DNA photolyase.
Martin Byrdin, Sandrine Villette, Agathe Espagne, Andre P M Eker, Klaus Brettel. J Phys Chem B 2008
25
40

Ultrafast dynamics of flavins in five redox states.
Ya-Ting Kao, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
151
20


Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity.
Yihua Huang, Richard Baxter, Barbara S Smith, Carrie L Partch, Christopher L Colbert, Johann Deisenhofer. Proc Natl Acad Sci U S A 2006
93
20

Cryptochrome 3 from Arabidopsis thaliana: structural and functional analysis of its complex with a folate light antenna.
Tobias Klar, Richard Pokorny, Julia Moldt, Alfred Batschauer, Lars-Oliver Essen. J Mol Biol 2007
62
20

Light-induced activation of class II cyclobutane pyrimidine dimer photolyases.
Asako Okafuji, Till Biskup, Kenichi Hitomi, Elizabeth D Getzoff, Gebhard Kaiser, Alfred Batschauer, Adelbert Bacher, Jun Hidema, Mika Teranishi, Kazuo Yamamoto,[...]. DNA Repair (Amst) 2010
25
40

Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states.
Jean-Pierre Bouly, Erik Schleicher, Maribel Dionisio-Sese, Filip Vandenbussche, Dominique Van Der Straeten, Nadia Bakrim, Stefan Meier, Alfred Batschauer, Paul Galland, Robert Bittl,[...]. J Biol Chem 2007
252
20

Femtosecond dynamics of flavin cofactor in DNA photolyase: radical reduction, local solvation, and charge recombination.
Haiyu Wang, Chaitanya Saxena, Donghui Quan, Aziz Sancar, Dongping Zhong. J Phys Chem B 2005
35
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.