A citation-based method for searching scientific literature

Zhong Deng, Amy E Campbell, Paul M Lieberman. Cell Cycle 2010
Times Cited: 64







List of co-cited articles
793 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
799
70

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
339
59



CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
144
46

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
218
43

MLL associates with telomeres and regulates telomeric repeat-containing RNA transcription.
Corrado Caslini, James A Connelly, Amparo Serna, Dominique Broccoli, Jay L Hess. Mol Cell Biol 2009
89
35


Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.
Emilio Cusanelli, Carmina Angelica Perez Romero, Pascal Chartrand. Mol Cell 2013
132
34

The epigenetic regulation of mammalian telomeres.
María A Blasco. Nat Rev Genet 2007
460
32

The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.
Brian Luke, Andrea Panza, Sophie Redon, Nahid Iglesias, Zhijian Li, Joachim Lingner. Mol Cell 2008
201
31

Telomerase activity is associated with an increase in DNA methylation at the proximal subtelomere and a reduction in telomeric transcription.
Laura J Ng, Jennifer E Cropley, Hilda A Pickett, Roger R Reddel, Catherine M Suter. Nucleic Acids Res 2009
102
28

Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene.
G L Xu, T H Bestor, D Bourc'his, C L Hsieh, N Tommerup, M Bugge, M Hulten, X Qu, J J Russo, E Viegas-Péquignot. Nature 1999
818
26

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
150
26

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
173
25


TERRA transcripts are bound by a complex array of RNA-binding proteins.
Isabel López de Silanes, Martina Stagno d'Alcontres, Maria A Blasco. Nat Commun 2010
94
23

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
189
23

Functional characterization of the TERRA transcriptome at damaged telomeres.
Antonio Porro, Sascha Feuerhahn, Julien Delafontaine, Harold Riethman, Jacques Rougemont, Joachim Lingner. Nat Commun 2014
125
23

DNA methyltransferases control telomere length and telomere recombination in mammalian cells.
Susana Gonzalo, Isabel Jaco, Mario F Fraga, Taiping Chen, En Li, Manel Esteller, María A Blasco. Nat Cell Biol 2006
414
21

TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA.
Rachel Litman Flynn, Richard C Centore, Roderick J O'Sullivan, Rekha Rai, Alice Tse, Zhou Songyang, Sandy Chang, Jan Karlseder, Lee Zou. Nature 2011
214
21

Telomeres in ICF syndrome cells are vulnerable to DNA damage due to elevated DNA:RNA hybrids.
Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
49
28

Characterization and rescue of telomeric abnormalities in ICF syndrome type I fibroblasts.
Shiran Yehezkel, Rony Shaked, Shira Sagie, Ron Berkovitz, Hofit Shachar-Bener, Yardena Segev, Sara Selig. Front Oncol 2013
23
56

Telomeric repeat-containing RNA structure in living cells.
Yan Xu, Yuta Suzuki, Kenichiro Ito, Makoto Komiyama. Proc Natl Acad Sci U S A 2010
120
18

Telomerase efficiently elongates highly transcribing telomeres in human cancer cells.
Benjamin O Farnung, Catherine M Brun, Rajika Arora, Luca E Lorenzi, Claus M Azzalin. PLoS One 2012
55
21


Telomeres: the silence is broken.
Claus M Azzalin, Joachim Lingner. Cell Cycle 2008
75
17

Structure and variability of human chromosome ends.
T de Lange, L Shiue, R M Myers, D R Cox, S L Naylor, A M Killery, H E Varmus. Mol Cell Biol 1990
688
17

TERRA: telomeric repeat-containing RNA.
Brian Luke, Joachim Lingner. EMBO J 2009
172
17

TERRA biogenesis, turnover and implications for function.
Sascha Feuerhahn, Nahid Iglesias, Andrea Panza, Antonio Porro, Joachim Lingner. FEBS Lett 2010
90
17

How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
17

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
Zhong Deng, Zhuo Wang, Nick Stong, Robert Plasschaert, Aliah Moczan, Horng-Shen Chen, Sufeng Hu, Priyankara Wikramasinghe, Ramana V Davuluri, Marisa S Bartolomei,[...]. EMBO J 2012
100
17

Induced pluripotent stem cells as a model for telomeric abnormalities in ICF type I syndrome.
Shira Sagie, Erika Ellran, Hagar Katzir, Rony Shaked, Shiran Yehezkel, Ilana Laevsky, Alaa Ghanayim, Dan Geiger, Maty Tzukerman, Sara Selig. Hum Mol Genet 2014
21
52

TERRA RNA Antagonizes ATRX and Protects Telomeres.
Hsueh-Ping Chu, Catherine Cifuentes-Rojas, Barry Kesner, Eric Aeby, Hun-Goo Lee, Chunyao Wei, Hyun Jung Oh, Myriam Boukhali, Wilhelm Haas, Jeannie T Lee. Cell 2017
94
17



Identification of TERRA locus unveils a telomere protection role through association to nearly all chromosomes.
Isabel López de Silanes, Osvaldo Graña, Maria Luigia De Bonis, Orlando Dominguez, David G Pisano, Maria A Blasco. Nat Commun 2014
52
19


Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline.
Nicholas Stong, Zhong Deng, Ravi Gupta, Sufen Hu, Shiela Paul, Amber K Weiner, Evan E Eichler, Tina Graves, Catrina C Fronick, Laura Courtney,[...]. Genome Res 2014
38
26

Telomeres acquire embryonic stem cell characteristics in induced pluripotent stem cells.
Rosa M Marion, Katerina Strati, Han Li, Agueda Tejera, Stefan Schoeftner, Sagrario Ortega, Manuel Serrano, Maria A Blasco. Cell Stem Cell 2009
330
14

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
Gavin W Collie, Shozeb M Haider, Stephen Neidle, Gary N Parkinson. Nucleic Acids Res 2010
145
14

Telomere length regulates the epigenetic status of mammalian telomeres and subtelomeres.
Roberta Benetti, Marta García-Cao, María A Blasco. Nat Genet 2007
243
14

Formation of telomeric repeat-containing RNA (TERRA) foci in highly proliferating mouse cerebellar neuronal progenitors and medulloblastoma.
Zhong Deng, Zhuo Wang, Chaomei Xiang, Aliah Molczan, Valérie Baubet, Jose Conejo-Garcia, Xiaowei Xu, Paul M Lieberman, Nadia Dahmane. J Cell Sci 2012
45
20



A DNA damage checkpoint response in telomere-initiated senescence.
Fabrizio d'Adda di Fagagna, Philip M Reaper, Lorena Clay-Farrace, Heike Fiegler, Philippa Carr, Thomas Von Zglinicki, Gabriele Saretzki, Nigel P Carter, Stephen P Jackson. Nature 2003
12

G-quadruplex formation by human telomeric repeats-containing RNA in Na+ solution.
Yan Xu, Kuniyuki Kaminaga, Makoto Komiyama. J Am Chem Soc 2008
125
12

Telomere length homeostasis.
Nele Hug, Joachim Lingner. Chromosoma 2006
211
12


Telomeres: protecting chromosomes against genome instability.
Roderick J O'Sullivan, Jan Karlseder. Nat Rev Mol Cell Biol 2010
538
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.