A citation-based method for searching scientific literature

Joel A Yates, Tushar Menon, Brandi A Thompson, Daniel A Bochar. FEBS Lett 2010
Times Cited: 29







List of co-cited articles
232 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CHD8 is an ATP-dependent chromatin remodeling factor that regulates beta-catenin target genes.
Brandi A Thompson, Véronique Tremblay, Grace Lin, Daniel A Bochar. Mol Cell Biol 2008
125
62

CHD8 suppresses p53-mediated apoptosis through histone H1 recruitment during early embryogenesis.
Masaaki Nishiyama, Kiyotaka Oshikawa, Yu-ichi Tsukada, Tadashi Nakagawa, Shun-ichiro Iemura, Tohru Natsume, Yuhong Fan, Akira Kikuchi, Arthur I Skoultchi, Keiichi I Nakayama. Nat Cell Biol 2009
119
48

The chromatin remodeling factor CHD8 interacts with elongating RNA polymerase II and controls expression of the cyclin E2 gene.
M Rodríguez-Paredes, M Ceballos-Chávez, M Esteller, M García-Domínguez, J C Reyes. Nucleic Acids Res 2009
57
44

CHD7 cooperates with PBAF to control multipotent neural crest formation.
Ruchi Bajpai, Denise A Chen, Alvaro Rada-Iglesias, Junmei Zhang, Yiqin Xiong, Jill Helms, Ching-Pin Chang, Yingming Zhao, Tomek Swigut, Joanna Wysocka. Nature 2010
367
37

The Chd family of chromatin remodelers.
Concetta G A Marfella, Anthony N Imbalzano. Mutat Res 2007
230
31

A novel beta-catenin-binding protein inhibits beta-catenin-dependent Tcf activation and axis formation.
I Sakamoto, S Kishida, A Fukui, M Kishida, H Yamamoto, S Hino, T Michiue, S Takada, M Asashima, A Kikuchi. J Biol Chem 2000
75
27

Regulation of androgen-responsive transcription by the chromatin remodeling factor CHD8.
Tushar Menon, Joel A Yates, Daniel A Bochar. Mol Endocrinol 2010
29
27

Histone H1 recruitment by CHD8 is essential for suppression of the Wnt-β-catenin signaling pathway.
Masaaki Nishiyama, Arthur I Skoultchi, Keiichi I Nakayama. Mol Cell Biol 2012
83
27

COMPASS: a complex of proteins associated with a trithorax-related SET domain protein.
T Miller, N J Krogan, J Dover, H Erdjument-Bromage, P Tempst, M Johnston, J F Greenblatt, A Shilatifard. Proc Natl Acad Sci U S A 2001
403
24

Regulation of MLL1 H3K4 methyltransferase activity by its core components.
Yali Dou, Thomas A Milne, Alexander J Ruthenburg, Seunghee Lee, Jae Woon Lee, Gregory L Verdine, C David Allis, Robert G Roeder. Nat Struct Mol Biol 2006
508
24

CHD8 associates with human Staf and contributes to efficient U6 RNA polymerase III transcription.
Chih-Chi Yuan, Xinyang Zhao, Laurence Florens, Selene K Swanson, Michael P Washburn, Nouria Hernandez. Mol Cell Biol 2007
47
20

Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF.
Yali Dou, Thomas A Milne, Alan J Tackett, Edwin R Smith, Aya Fukuda, Joanna Wysocka, C David Allis, Brian T Chait, Jay L Hess, Robert G Roeder. Cell 2005
476
20

Genomic distribution of CHD7 on chromatin tracks H3K4 methylation patterns.
Michael P Schnetz, Cynthia F Bartels, Kuntal Shastri, Dheepa Balasubramanian, Gabriel E Zentner, Ravishankar Balaji, Xiaodong Zhang, Lingyun Song, Zhenghe Wang, Thomas Laframboise,[...]. Genome Res 2009
166
20

Mutations in a new member of the chromodomain gene family cause CHARGE syndrome.
Lisenka E L M Vissers, Conny M A van Ravenswaaij, Ronald Admiraal, Jane A Hurst, Bert B A de Vries, Irene M Janssen, Walter A van der Vliet, Erik H L P G Huys, Pieter J de Jong, Ben C J Hamel,[...]. Nat Genet 2004
760
20

CHD8 interacts with CHD7, a protein which is mutated in CHARGE syndrome.
Tserendulam Batsukh, Lasse Pieper, Anna M Koszucka, Nina von Velsen, Sigrid Hoyer-Fender, Miriam Elbracht, Jorieke E H Bergman, Lies H Hoefsloot, Silke Pauli. Hum Mol Genet 2010
51
20

The chromatin remodeller CHD8 is required for E2F-dependent transcription activation of S-phase genes.
Alicia Subtil-Rodríguez, Elena Vázquez-Chávez, María Ceballos-Chávez, Manuel Rodríguez-Paredes, José I Martín-Subero, Manel Esteller, José C Reyes. Nucleic Acids Res 2014
44
20

Disruptive CHD8 mutations define a subtype of autism early in development.
Raphael Bernier, Christelle Golzio, Bo Xiong, Holly A Stessman, Bradley P Coe, Osnat Penn, Kali Witherspoon, Jennifer Gerdts, Carl Baker, Anneke T Vulto-van Silfhout,[...]. Cell 2014
386
20

CTCF-dependent chromatin insulator is linked to epigenetic remodeling.
Ko Ishihara, Mitsuo Oshimura, Mitsuyoshi Nakao. Mol Cell 2006
192
17

CHD proteins: a diverse family with strong ties.
J Adam Hall, Philippe T Georgel. Biochem Cell Biol 2007
140
17

Structure of WDR5 bound to mixed lineage leukemia protein-1 peptide.
Anamika Patel, Venkatasubramanian Dharmarajan, Michael S Cosgrove. J Biol Chem 2008
114
17

The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4.
A Roguev, D Schaft, A Shevchenko, W W Pijnappel, M Wilm, R Aasland, A F Stewart. EMBO J 2001
440
17

A conserved arginine-containing motif crucial for the assembly and enzymatic activity of the mixed lineage leukemia protein-1 core complex.
Anamika Patel, Valarie E Vought, Venkatasubramanian Dharmarajan, Michael S Cosgrove. J Biol Chem 2008
119
17

CHD7 targets active gene enhancer elements to modulate ES cell-specific gene expression.
Michael P Schnetz, Lusy Handoko, Batool Akhtar-Zaidi, Cynthia F Bartels, C Filipe Pereira, Amanda G Fisher, David J Adams, Paul Flicek, Gregory E Crawford, Thomas Laframboise,[...]. PLoS Genet 2010
168
17

The plasticity of WDR5 peptide-binding cleft enables the binding of the SET1 family of histone methyltransferases.
Pamela Zhang, Hwabin Lee, Joseph S Brunzelle, Jean-Francois Couture. Nucleic Acids Res 2012
67
17

Patterns and rates of exonic de novo mutations in autism spectrum disorders.
Benjamin M Neale, Yan Kou, Li Liu, Avi Ma'ayan, Kaitlin E Samocha, Aniko Sabo, Chiao-Feng Lin, Christine Stevens, Li-San Wang, Vladimir Makarov,[...]. Nature 2012
17

Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
Brian J O'Roak, Laura Vives, Santhosh Girirajan, Emre Karakoc, Niklas Krumm, Bradley P Coe, Roie Levy, Arthur Ko, Choli Lee, Joshua D Smith,[...]. Nature 2012
17

Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.
Brian J O'Roak, Laura Vives, Wenqing Fu, Jarrett D Egertson, Ian B Stanaway, Ian G Phelps, Gemma Carvill, Akash Kumar, Choli Lee, Katy Ankenman,[...]. Science 2012
784
17

De novo mutations revealed by whole-exome sequencing are strongly associated with autism.
Stephan J Sanders, Michael T Murtha, Abha R Gupta, John D Murdoch, Melanie J Raubeson, A Jeremy Willsey, A Gulhan Ercan-Sencicek, Nicholas M DiLullo, Neelroop N Parikshak, Jason L Stein,[...]. Nature 2012
17

The Drosophila kismet gene is related to chromatin-remodeling factors and is required for both segmentation and segment identity.
G Daubresse, R Deuring, L Moore, O Papoulas, I Zakrajsek, W R Waldrip, M P Scott, J A Kennison, J W Tamkun. Development 1999
113
13


WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development.
Joanna Wysocka, Tomek Swigut, Thomas A Milne, Yali Dou, Xin Zhang, Alma L Burlingame, Robert G Roeder, Ali H Brivanlou, C David Allis. Cell 2005
599
13

Molecular recognition of histone H3 by the WD40 protein WDR5.
Jean-François Couture, Evys Collazo, Raymond C Trievel. Nat Struct Mol Biol 2006
175
13

Structural basis for the requirement of additional factors for MLL1 SET domain activity and recognition of epigenetic marks.
Stacey M Southall, Poon-Sheng Wong, Zain Odho, S Mark Roe, Jon R Wilson. Mol Cell 2009
153
13

Regulation of serum response factor activity and smooth muscle cell apoptosis by chromodomain helicase DNA-binding protein 8.
Jennifer M Rodenberg, April M Hoggatt, Meng Chen, Ketrija Touw, Rebekah Jones, B Paul Herring. Am J Physiol Cell Physiol 2010
13
30

Early embryonic death in mice lacking the beta-catenin-binding protein Duplin.
Masaaki Nishiyama, Keiko Nakayama, Ryosuke Tsunematsu, Tadasuke Tsukiyama, Akira Kikuchi, Keiichi I Nakayama. Mol Cell Biol 2004
48
13

WRAD: enabler of the SET1-family of H3K4 methyltransferases.
Patricia Ernst, Christopher R Vakoc. Brief Funct Genomics 2012
67
13

A de novo convergence of autism genetics and molecular neuroscience.
Niklas Krumm, Brian J O'Roak, Jay Shendure, Evan E Eichler. Trends Neurosci 2014
276
13

Sequencing chromosomal abnormalities reveals neurodevelopmental loci that confer risk across diagnostic boundaries.
Michael E Talkowski, Jill A Rosenfeld, Ian Blumenthal, Vamsee Pillalamarri, Colby Chiang, Adrian Heilbut, Carl Ernst, Carrie Hanscom, Elizabeth Rossin, Amelia M Lindgren,[...]. Cell 2012
380
13

The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment.
Justin Cotney, Rebecca A Muhle, Stephan J Sanders, Li Liu, A Jeremy Willsey, Wei Niu, Wenzhong Liu, Lambertus Klei, Jing Lei, Jun Yin,[...]. Nat Commun 2015
167
13


Estrogen regulation of cyclin E2 requires cyclin D1 but not c-Myc.
C Elizabeth Caldon, C Marcelo Sergio, Judith Schütte, Marijke N Boersma, Robert L Sutherland, Jason S Carroll, Elizabeth A Musgrove. Mol Cell Biol 2009
48
10

The Drosophila trithorax group protein Kismet facilitates an early step in transcriptional elongation by RNA Polymerase II.
Shrividhya Srinivasan, Jennifer A Armstrong, Renate Deuring, Ina K Dahlsveen, Helen McNeill, John W Tamkun. Development 2005
96
10

Drosophila Kismet regulates histone H3 lysine 27 methylation and early elongation by RNA polymerase II.
Shrividhya Srinivasan, Kristel M Dorighi, John W Tamkun. PLoS Genet 2008
92
10

A histone lysine methyltransferase activated by non-canonical Wnt signalling suppresses PPAR-gamma transactivation.
Ichiro Takada, Masatomo Mihara, Miyuki Suzawa, Fumiaki Ohtake, Shinji Kobayashi, Mamoru Igarashi, Min-Young Youn, Ken-ichi Takeyama, Takashi Nakamura, Yoshihiro Mezaki,[...]. Nat Cell Biol 2007
317
10


Characterization of the CHD family of proteins.
T Woodage, M A Basrai, A D Baxevanis, P Hieter, F S Collins. Proc Natl Acad Sci U S A 1997
276
10

The human Mi-2/NuRD complex and gene regulation.
S A Denslow, P A Wade. Oncogene 2007
330
10

Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Alexander J Ruthenburg, Wooikoon Wang, Daina M Graybosch, Haitao Li, C David Allis, Dinshaw J Patel, Gregory L Verdine. Nat Struct Mol Biol 2006
175
10


High-resolution profiling of histone methylations in the human genome.
Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao. Cell 2007
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.