A citation-based method for searching scientific literature

Kristin S Koutmou, Anette Casiano-Negroni, Melissa M Getz, Samuel Pazicni, Andrew J Andrews, James E Penner-Hahn, Hashim M Al-Hashimi, Carol A Fierke. Proc Natl Acad Sci U S A 2010
Times Cited: 15







List of co-cited articles
285 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
36
46

A general two-metal-ion mechanism for catalytic RNA.
T A Steitz, J A Steitz. Proc Natl Acad Sci U S A 1993
875
40

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
155
40


Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Norman R Pace. RNA 2009
37
40

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
40

Identification of catalytic metal ion ligands in ribozymes.
John K Frederiksen, Joseph A Piccirilli. Methods 2009
46
33

The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA.
C Spitzfaden, N Nicholson, J J Jones, S Guth, R Lehr, C D Prescott, L A Hegg, D S Eggleston. J Mol Biol 2000
78
33




Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P.
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
62
33

High-resolution structure of RNase P protein from Thermotoga maritima.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Richard J Carter, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2003
68
33



Probing the architecture of the B. subtilis RNase P holoenzyme active site by cross-linking and affinity cleavage.
Somashekarappa Niranjanakumari, Jeremy J Day-Storms, Mahiuddin Ahmed, John Hsieh, Nathan H Zahler, Ronald A Venters, Carol A Fierke. RNA 2007
29
33

Structural perspective on the activation of RNAse P RNA by protein.
Amy H Buck, Alexei V Kazantsev, Andrew B Dalby, Norman R Pace. Nat Struct Mol Biol 2005
57
33

Ribonuclease P protein structure: evolutionary origins in the translational apparatus.
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998
128
33

Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
33


The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
33

Bacterial RNase P: a new view of an ancient enzyme.
Alexei V Kazantsev, Norman R Pace. Nat Rev Microbiol 2006
136
33

A divalent cation stabilizes the active conformation of the B. subtilis RNase P x pre-tRNA complex: a role for an inner-sphere metal ion in RNase P.
John Hsieh, Kristin S Koutmou, David Rueda, Markos Koutmos, Nils G Walter, Carol A Fierke. J Mol Biol 2010
23
33

Crystal structure of a self-spliced group II intron.
Navtej Toor, Kevin S Keating, Sean D Taylor, Anna Marie Pyle. Science 2008
338
33


Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
189
33



Metal ions in the structure and function of RNA.
Anna Marie Pyle. J Biol Inorg Chem 2002
236
26



Protein-precursor tRNA contact leads to sequence-specific recognition of 5' leaders by bacterial ribonuclease P.
Kristin S Koutmou, Nathan H Zahler, Jeffrey C Kurz, Frank E Campbell, Michael E Harris, Carol A Fierke. J Mol Biol 2010
31
26

The 5' leader of precursor tRNAAsp bound to the Bacillus subtilis RNase P holoenzyme has an extended conformation.
David Rueda, John Hsieh, Jeremy J Day-Storms, Carol A Fierke, Nils G Walter. Biochemistry 2005
44
26

Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P.
Nathan H Zahler, Eric L Christian, Michael E Harris. RNA 2003
65
26

Structure of ribonuclease P--a universal ribozyme.
Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Curr Opin Struct Biol 2006
56
26

The enigma of ribonuclease P evolution.
Enno Hartmann, Roland K Hartmann. Trends Genet 2003
102
26

Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
137
26

Controlling ribozyme activity by metal ions.
Joachim Schnabl, Roland K O Sigel. Curr Opin Chem Biol 2010
62
26


Metal ion binding to catalytic RNA molecules.
Victoria J DeRose. Curr Opin Struct Biol 2003
98
26

A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor.
S Basu, R P Rambo, J Strauss-Soukup, J H Cate, A R Ferré-D'Amaré, S A Strobel, J A Doudna. Nat Struct Biol 1998
170
26

Metal ion dependence of cooperative collapse transitions in RNA.
Sarvin Moghaddam, Gokhan Caliskan, Seema Chauhan, Changbong Hyeon, R M Briber, D Thirumalai, Sarah A Woodson. J Mol Biol 2009
58
26

Metal ion binding sites in a group II intron core.
R K Sigel, A Vaidya, A M Pyle. Nat Struct Biol 2000
101
26


On the role of magnesium ions in RNA stability.
V K Misra, D E Draper. Biopolymers 1998
237
20

Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
20




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.