A citation-based method for searching scientific literature

KyeongEun Lee, Zandrea Ambrose, Thomas D Martin, Ilker Oztop, Alok Mulky, John G Julias, Nick Vandegraaff, Joerg G Baumann, Rui Wang, Wendy Yuen, Taichiro Takemura, Kenneth Shelton, Ichiro Taniuchi, Yuan Li, Joseph Sodroski, Dan R Littman, John M Coffin, Stephen H Hughes, Derya Unutmaz, Alan Engelman, Vineet N KewalRamani. Cell Host Microbe 2010
Times Cited: 309







List of co-cited articles
1135 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CPSF6 defines a conserved capsid interface that modulates HIV-1 replication.
Amanda J Price, Adam J Fletcher, Torsten Schaller, Tom Elliott, KyeongEun Lee, Vineet N KewalRamani, Jason W Chin, Greg J Towers, Leo C James. PLoS Pathog 2012
169
55

HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.
Torsten Schaller, Karen E Ocwieja, Jane Rasaiyaah, Amanda J Price, Troy L Brady, Shoshannah L Roth, Stéphane Hué, Adam J Fletcher, KyeongEun Lee, Vineet N KewalRamani,[...]. PLoS Pathog 2011
321
54

A critical role for alternative polyadenylation factor CPSF6 in targeting HIV-1 integration to transcriptionally active chromatin.
Gregory A Sowd, Erik Serrao, Hao Wang, Weifeng Wang, Hind J Fadel, Eric M Poeschla, Alan N Engelman. Proc Natl Acad Sci U S A 2016
134
47


Host cofactors and pharmacologic ligands share an essential interface in HIV-1 capsid that is lost upon disassembly.
Amanda J Price, David A Jacques, William A McEwan, Adam J Fletcher, Sebastian Essig, Jason W Chin, Upul D Halambage, Christopher Aiken, Leo C James. PLoS Pathog 2014
160
44

Capsid-CPSF6 Interaction Licenses Nuclear HIV-1 Trafficking to Sites of Viral DNA Integration.
Vasudevan Achuthan, Jill M Perreira, Gregory A Sowd, Maritza Puray-Chavez, William M McDougall, Adriana Paulucci-Holthauzen, Xiaolin Wu, Hind J Fadel, Eric M Poeschla, Asha S Multani,[...]. Cell Host Microbe 2018
85
51


HIV-1 capsid: the multifaceted key player in HIV-1 infection.
Edward M Campbell, Thomas J Hope. Nat Rev Microbiol 2015
230
42

Structural basis of HIV-1 capsid recognition by PF74 and CPSF6.
Akash Bhattacharya, Steven L Alam, Thomas Fricke, Kaneil Zadrozny, Jaroslaw Sedzicki, Alexander B Taylor, Borries Demeler, Owen Pornillos, Barbie K Ganser-Pornillos, Felipe Diaz-Griffero,[...]. Proc Natl Acad Sci U S A 2014
148
42

HIV-1 evades innate immune recognition through specific cofactor recruitment.
Jane Rasaiyaah, Choon Ping Tan, Adam J Fletcher, Amanda J Price, Caroline Blondeau, Laura Hilditch, David A Jacques, David L Selwood, Leo C James, Mahdad Noursadeghi,[...]. Nature 2013
303
41

HIV-1 nuclear import in macrophages is regulated by CPSF6-capsid interactions at the nuclear pore complex.
David Alejandro Bejarano, Ke Peng, Vibor Laketa, Kathleen Börner, K Laurence Jost, Bojana Lucic, Bärbel Glass, Marina Lusic, Barbara Müller, Hans-Georg Kräusslich. Elife 2019
84
47

Direct Visualization of HIV-1 Replication Intermediates Shows that Capsid and CPSF6 Modulate HIV-1 Intra-nuclear Invasion and Integration.
Christopher R Chin, Jill M Perreira, George Savidis, Jocelyn M Portmann, Aaron M Aker, Eric M Feeley, Miles C Smith, Abraham L Brass. Cell Rep 2015
97
39

HIV-1 uncoats in the nucleus near sites of integration.
Ryan C Burdick, Chenglei Li, MohamedHusen Munshi, Jonathan M O Rawson, Kunio Nagashima, Wei-Shau Hu, Vinay K Pathak. Proc Natl Acad Sci U S A 2020
100
36

Quantitative microscopy of functional HIV post-entry complexes reveals association of replication with the viral capsid.
Ke Peng, Walter Muranyi, Bärbel Glass, Vibor Laketa, Stephen R Yant, Luong Tsai, Tomas Cihlar, Barbara Müller, Hans-Georg Kräusslich. Elife 2014
121
33

TNPO3 protects HIV-1 replication from CPSF6-mediated capsid stabilization in the host cell cytoplasm.
Alberto De Iaco, Federico Santoni, Anne Vannier, Michel Guipponi, Stylianos Antonarakis, Jeremy Luban. Retrovirology 2013
107
30

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Gongpu Zhao, Juan R Perilla, Ernest L Yufenyuy, Xin Meng, Bo Chen, Jiying Ning, Jinwoo Ahn, Angela M Gronenborn, Klaus Schulten, Christopher Aiken,[...]. Nature 2013
462
30

Capsid-CPSF6 Interaction Is Dispensable for HIV-1 Replication in Primary Cells but Is Selected during Virus Passage In Vivo.
Akatsuki Saito, Matthew S Henning, Erik Serrao, Brittany N Dubose, Samantha Teng, Jing Huang, Xiangming Li, Namiko Saito, Saumendra Prasad Roy, Mohammad Adnan Siddiqui,[...]. J Virol 2016
41
70

Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication.
Brett M Forshey, Uta von Schwedler, Wesley I Sundquist, Christopher Aiken. J Virol 2002
392
29

Dynamics and regulation of nuclear import and nuclear movements of HIV-1 complexes.
Ryan C Burdick, Krista A Delviks-Frankenberry, Jianbo Chen, Sanath K Janaka, Jaya Sastri, Wei-Shau Hu, Vinay K Pathak. PLoS Pathog 2017
64
43

Human nucleoporins promote HIV-1 docking at the nuclear pore, nuclear import and integration.
Francesca Di Nunzio, Anne Danckaert, Thomas Fricke, Patricio Perez, Juliette Fernandez, Emmanuelle Perret, Pascal Roux, Spencer Shorte, Pierre Charneau, Felipe Diaz-Griffero,[...]. PLoS One 2012
111
28

Early cytoplasmic uncoating is associated with infectivity of HIV-1.
João I Mamede, Gianguido C Cianci, Meegan R Anderson, Thomas J Hope. Proc Natl Acad Sci U S A 2017
73
38

Complementary assays reveal a relationship between HIV-1 uncoating and reverse transcription.
Amy E Hulme, Omar Perez, Thomas J Hope. Proc Natl Acad Sci U S A 2011
182
27



HIV integration targeting: a pathway involving Transportin-3 and the nuclear pore protein RanBP2.
Karen E Ocwieja, Troy L Brady, Keshet Ronen, Alyssa Huegel, Shoshannah L Roth, Torsten Schaller, Leo C James, Greg J Towers, John A T Young, Sumit K Chanda,[...]. PLoS Pathog 2011
164
25

X-ray structures of the hexameric building block of the HIV capsid.
Owen Pornillos, Barbie K Ganser-Pornillos, Brian N Kelly, Yuanzi Hua, Frank G Whitby, C David Stout, Wesley I Sundquist, Christopher P Hill, Mark Yeager. Cell 2009
363
25

Capsid-Dependent Host Factors in HIV-1 Infection.
Masahiro Yamashita, Alan N Engelman. Trends Microbiol 2017
64
39

The structure and flexibility of conical HIV-1 capsids determined within intact virions.
Simone Mattei, Bärbel Glass, Wim J H Hagen, Hans-Georg Kräusslich, John A G Briggs. Science 2016
131
25

Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Jiong Shi, Jing Zhou, Vaibhav B Shah, Christopher Aiken, Kevin Whitby. J Virol 2011
172
25

Nuclear pore blockade reveals that HIV-1 completes reverse transcription and uncoating in the nucleus.
Adarsh Dharan, Niklas Bachmann, Sarah Talley, Virginia Zwikelmaier, Edward M Campbell. Nat Microbiol 2020
75
33

STRUCTURAL VIROLOGY. X-ray crystal structures of native HIV-1 capsid protein reveal conformational variability.
Anna T Gres, Karen A Kirby, Vineet N KewalRamani, John J Tanner, Owen Pornillos, Stefan G Sarafianos. Science 2015
141
24

Nup153 and Nup98 bind the HIV-1 core and contribute to the early steps of HIV-1 replication.
Francesca Di Nunzio, Thomas Fricke, Annarita Miccio, Jose Carlos Valle-Casuso, Patricio Perez, Philippe Souque, Ermanno Rizzi, Marco Severgnini, Fulvio Mavilio, Pierre Charneau,[...]. Virology 2013
99
24


Time-Resolved Imaging of Single HIV-1 Uncoating In Vitro and in Living Cells.
Ashwanth C Francis, Mariana Marin, Jiong Shi, Christopher Aiken, Gregory B Melikyan. PLoS Pathog 2016
72
33


The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys.
Matthew Stremlau, Christopher M Owens, Michel J Perron, Michael Kiessling, Patrick Autissier, Joseph Sodroski. Nature 2004
23

Identification of host proteins required for HIV infection through a functional genomic screen.
Abraham L Brass, Derek M Dykxhoorn, Yair Benita, Nan Yan, Alan Engelman, Ramnik J Xavier, Judy Lieberman, Stephen J Elledge. Science 2008
23

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection.
Caroline Goujon, Olivier Moncorgé, Hélène Bauby, Tomas Doyle, Christopher C Ward, Torsten Schaller, Stéphane Hué, Wendy S Barclay, Reiner Schulz, Michael H Malim. Nature 2013
385
23

HIV capsid is a tractable target for small molecule therapeutic intervention.
Wade S Blair, Chris Pickford, Stephen L Irving, David G Brown, Marie Anderson, Richard Bazin, Joan Cao, Giuseppe Ciaramella, Jason Isaacson, Lynn Jackson,[...]. PLoS Pathog 2010
192
23

Roles of Capsid-Interacting Host Factors in Multimodal Inhibition of HIV-1 by PF74.
Akatsuki Saito, Damien Ferhadian, Gregory A Sowd, Erik Serrao, Jiong Shi, Upul D Halambage, Samantha Teng, Juan Soto, Mohammad Adnan Siddiqui, Alan N Engelman,[...]. J Virol 2016
53
43

HIV-1 replication complexes accumulate in nuclear speckles and integrate into speckle-associated genomic domains.
Ashwanth C Francis, Mariana Marin, Parmit K Singh, Vasudevan Achuthan, Mathew J Prellberg, Kristina Palermino-Rowland, Shuiyun Lan, Philip R Tedbury, Stefan G Sarafianos, Alan N Engelman,[...]. Nat Commun 2020
43
53

Atomic-level modelling of the HIV capsid.
Owen Pornillos, Barbie K Ganser-Pornillos, Mark Yeager. Nature 2011
257
22

Nuclear pore heterogeneity influences HIV-1 infection and the antiviral activity of MX2.
Melissa Kane, Stephanie V Rebensburg, Matthew A Takata, Trinity M Zang, Masahiro Yamashita, Mamuka Kvaratskhelia, Paul D Bieniasz. Elife 2018
57
38

MX2 is an interferon-induced inhibitor of HIV-1 infection.
Melissa Kane, Shalini S Yadav, Julia Bitzegeio, Sebla B Kutluay, Trinity Zang, Sam J Wilson, John W Schoggins, Charles M Rice, Masahiro Yamashita, Theodora Hatziioannou,[...]. Nature 2013
335
21

Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.
Renate König, Yingyao Zhou, Daniel Elleder, Tracy L Diamond, Ghislain M C Bonamy, Jeffrey T Irelan, Chih-Yuan Chiang, Buu P Tu, Paul D De Jesus, Caroline E Lilley,[...]. Cell 2008
724
21

Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B.
J Luban, K L Bossolt, E K Franke, G V Kalpana, S P Goff. Cell 1993
673
21

The ability of TNPO3-depleted cells to inhibit HIV-1 infection requires CPSF6.
Thomas Fricke, Jose Carlos Valle-Casuso, Tommy E White, Alberto Brandariz-Nuñez, William J Bosche, Natalia Reszka, Robert Gorelick, Felipe Diaz-Griffero. Retrovirology 2013
69
30

Differential effects of human immunodeficiency virus type 1 capsid and cellular factors nucleoporin 153 and LEDGF/p75 on the efficiency and specificity of viral DNA integration.
Yasuhiro Koh, Xiaolin Wu, Andrea L Ferris, Kenneth A Matreyek, Steven J Smith, KyeongEun Lee, Vineet N KewalRamani, Stephen H Hughes, Alan Engelman. J Virol 2013
87
24

Assembly and analysis of conical models for the HIV-1 core.
B K Ganser, S Li, V Y Klishko, J T Finch, W I Sundquist. Science 1999
464
21



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.