A citation-based method for searching scientific literature

Monika Zakrzewska-Placzek, Frederic F Souret, Grzegorz J Sobczyk, Pamela J Green, Joanna Kufel. Nucleic Acids Res 2010
Times Cited: 70







List of co-cited articles
830 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thaliana.
Heike Lange, Sarah Holec, Valérie Cognat, Laurent Pieuchot, Monique Le Ret, Jean Canaday, Dominique Gagliardi. Mol Cell Biol 2008
62
30

Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors.
Isabelle Gy, Virginie Gasciolli, Dominique Lauressergues, Jean-Benoit Morel, Julie Gombert, Florence Proux, Caroline Proux, Hervé Vaucheret, Allison C Mallory. Plant Cell 2007
191
25


A role for the ribosome in development.
Mary E Byrne. Trends Plant Sci 2009
177
24

Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3'ETS in Arabidopsis.
P Comella, F Pontvianne, S Lahmy, F Vignols, N Barbezier, A Debures, E Jobet, E Brugidou, M Echeverria, J Sáez-Vásquez. Nucleic Acids Res 2008
54
29

The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors.
Lionel Tafforeau, Christiane Zorbas, Jean-Louis Langhendries, Sahra-Taylor Mullineux, Vassiliki Stamatopoulou, Romain Mullier, Ludivine Wacheul, Denis L J Lafontaine. Mol Cell 2013
245
22

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
421
22

Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome.
Julia A Chekanova, Brian D Gregory, Sergei V Reverdatto, Huaming Chen, Ravi Kumar, Tanya Hooker, Junshi Yazaki, Pinghua Li, Nikolai Skiba, Qian Peng,[...]. Cell 2007
229
21

40S ribosome biogenesis co-factors are essential for gametophyte and embryo development.
Sandra Missbach, Benjamin L Weis, Roman Martin, Stefan Simm, Markus T Bohnsack, Enrico Schleiff. PLoS One 2013
49
30

AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets.
Frédéric F Souret, James P Kastenmayer, Pamela J Green. Mol Cell 2004
241
20

Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis.
Frederic Pontvianne, Isabel Matía, Julien Douet, Sylvette Tourmente, Francisco J Medina, Manuel Echeverria, Julio Sáez-Vásquez. Mol Biol Cell 2007
86
20

APUM23, a nucleolar Puf domain protein, is involved in pre-ribosomal RNA processing and normal growth patterning in Arabidopsis.
Nazia Abbasi, Ho Bang Kim, Nam-Il Park, Hyung-Sae Kim, Yeon-Ki Kim, Youn-Il Park, Sang-Bong Choi. Plant J 2010
66
21


Mapping the cleavage sites on mammalian pre-rRNAs: where do we stand?
Sahra-Taylor Mullineux, Denis L J Lafontaine. Biochimie 2012
127
20

Arabidopsis protein arginine methyltransferase 3 is required for ribosome biogenesis by affecting precursor ribosomal RNA processing.
Runlai Hang, Chunyan Liu, Ayaz Ahmad, Yong Zhang, Falong Lu, Xiaofeng Cao. Proc Natl Acad Sci U S A 2014
44
31

The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site.
Y Henry, H Wood, J P Morrissey, E Petfalski, S Kearsey, D Tollervey. EMBO J 1994
259
18


RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
667
18

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
511
17


Arabidopsis nucleolin affects plant development and patterning.
Jalean Joyanne Petricka, Timothy Mark Nelson. Plant Physiol 2007
75
17

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
406
17

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
284
17

Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.
E Petfalski, T Dandekar, Y Henry, D Tollervey. Mol Cell Biol 1998
166
15

Ribosome synthesis in Saccharomyces cerevisiae.
J Venema, D Tollervey. Annu Rev Genet 1999
617
15

A link between RNA metabolism and silencing affecting Arabidopsis development.
Brian D Gregory, Ronan C O'Malley, Ryan Lister, Mark A Urich, Julian Tonti-Filippini, Huaming Chen, A Harvey Millar, Joseph R Ecker. Dev Cell 2008
271
15

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.
Minkyu Kim, Nevan J Krogan, Lidia Vasiljeva, Oliver J Rando, Eduard Nedea, Jack F Greenblatt, Stephen Buratowski. Nature 2004
356
15

The small subunit processome in ribosome biogenesis—progress and prospects.
Kathleen R Phipps, J Michael Charette, Susan J Baserga. Wiley Interdiscip Rev RNA 2011
122
15

Genetic identification of Arabidopsis RID2 as an essential factor involved in pre-rRNA processing.
Iwai Ohbayashi, Mineko Konishi, Kazuo Ebine, Munetaka Sugiyama. Plant J 2011
35
31

The evolution of the ribosome biogenesis pathway from a yeast perspective.
Ingo Ebersberger, Stefan Simm, Matthias S Leisegang, Peter Schmitzberger, Oliver Mirus, Arndt von Haeseler, Markus T Bohnsack, Enrico Schleiff. Nucleic Acids Res 2014
56
19

atBRX1-1 and atBRX1-2 are involved in an alternative rRNA processing pathway in Arabidopsis thaliana.
Benjamin L Weis, Denise Palm, Sandra Missbach, Markus T Bohnsack, Enrico Schleiff. RNA 2015
30
36

The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana.
Heike Lange, Hélène Zuber, François M Sement, Johana Chicher, Lauriane Kuhn, Philippe Hammann, Véronique Brunaud, Caroline Bérard, Nathalie Bouteiller, Sandrine Balzergue,[...]. PLoS Genet 2014
58
18

Plant-Specific Features of Ribosome Biogenesis.
Benjamin L Weis, Jelena Kovacevic, Sandra Missbach, Enrico Schleiff. Trends Plant Sci 2015
69
15

Sugar-inducible expression of the nucleolin-1 gene of Arabidopsis thaliana and its role in ribosome synthesis, growth and development.
Hisae Kojima, Takamasa Suzuki, Takenori Kato, Ken-ichi Enomoto, Shusei Sato, Tomohiko Kato, Satoshi Tabata, Julio Sáez-Vasquez, Manuel Echeverría, Tsuyoshi Nakagawa,[...]. Plant J 2007
71
14

SLOW WALKER1, essential for gametogenesis in Arabidopsis, encodes a WD40 protein involved in 18S ribosomal RNA biogenesis.
Dong-Qiao Shi, Jie Liu, Yan-Hui Xiang, De Ye, Venkatesan Sundaresan, Wei-Cai Yang. Plant Cell 2005
125
14


Differential contributions of ribosomal protein genes to Arabidopsis thaliana leaf development.
Gorou Horiguchi, Almudena Mollá-Morales, José Manuel Pérez-Pérez, Kouji Kojima, Pedro Robles, María Rosa Ponce, José Luis Micol, Hirokazu Tsukaya. Plant J 2011
106
14

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
365
12

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
650
12

Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA.
Marlene Oeffinger, Daniel Zenklusen, Angelica Ferguson, Karen E Wei, Aziz El Hage, David Tollervey, Brian T Chait, Robert H Singer, Michael P Rout. Mol Cell 2009
54
16


Identification of protein factors and U3 snoRNAs from a Brassica oleracea RNP complex involved in the processing of pre-rRNA.
Hala Samaha, Valérie Delorme, Frederic Pontvianne, Richard Cooke, Francois Delalande, Alain Van Dorsselaer, Manuel Echeverria, Julio Sáez-Vásquez. Plant J 2010
21
42

Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis.
Gonzalo M Estavillo, Peter A Crisp, Wannarat Pornsiriwong, Markus Wirtz, Derek Collinge, Chris Carrie, Estelle Giraud, James Whelan, Pascale David, Hélène Javot,[...]. Plant Cell 2011
300
12

Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.
Alison F Pendle, Gillian P Clark, Reinier Boon, Dominika Lewandowska, Yun Wah Lam, Jens Andersen, Matthias Mann, Angus I Lamond, John W S Brown, Peter J Shaw. Mol Biol Cell 2005
259
12

Both endonucleolytic and exonucleolytic cleavage mediate ITS1 removal during human ribosomal RNA processing.
Katherine E Sloan, Sandy Mattijssen, Simon Lebaron, David Tollervey, Ger J M Pruijn, Nicholas J Watkins. J Cell Biol 2013
88
12


The 60S associated ribosome biogenesis factor LSG1-2 is required for 40S maturation in Arabidopsis thaliana.
Benjamin L Weis, Sandra Missbach, Julian Marzi, Markus T Bohnsack, Enrico Schleiff. Plant J 2014
30
30

The many pathways of RNA degradation.
Jonathan Houseley, David Tollervey. Cell 2009
648
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.