A citation-based method for searching scientific literature

Xunbao Duan, Steve G Kelsen, Allen B Clarkson, Rong Ji, Salim Merali. Proteomics 2010
Times Cited: 18







List of co-cited articles
87 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The Treacher Collins syndrome (TCOF1) gene product is involved in ribosomal DNA gene transcription by interacting with upstream binding factor.
Benigno C Valdez, Dale Henning, Rolando B So, Jill Dixon, Michael J Dixon. Proc Natl Acad Sci U S A 2004
186
44

Tcof1/Treacle is required for neural crest cell formation and proliferation deficiencies that cause craniofacial abnormalities.
Jill Dixon, Natalie C Jones, Lisa L Sandell, Sachintha M Jayasinghe, Jennifer Crane, Jean-Philippe Rey, Michael J Dixon, Paul A Trainor. Proc Natl Acad Sci U S A 2006
245
38

Mutations in genes encoding subunits of RNA polymerases I and III cause Treacher Collins syndrome.
Johannes G Dauwerse, Jill Dixon, Saskia Seland, Claudia A L Ruivenkamp, Arie van Haeringen, Lies H Hoefsloot, Dorien J M Peters, Agnes Clement-de Boers, Cornelia Daumer-Haas, Robert Maiwald,[...]. Nat Genet 2011
198
38

Prevention of the neurocristopathy Treacher Collins syndrome through inhibition of p53 function.
Natalie C Jones, Megan L Lynn, Karin Gaudenz, Daisuke Sakai, Kazushi Aoto, Jean-Phillipe Rey, Earl F Glynn, Lacey Ellington, Chunying Du, Jill Dixon,[...]. Nat Med 2008
292
38


Treacher Collins syndrome TCOF1 protein cooperates with NBS1 in the DNA damage response.
Alberto Ciccia, Jen-Wei Huang, Lior Izhar, Mathew E Sowa, J Wade Harper, Stephen J Elledge. Proc Natl Acad Sci U S A 2014
69
33



Treacher Collins syndrome: etiology, pathogenesis and prevention.
Paul A Trainor, Jill Dixon, Michael J Dixon. Eur J Hum Genet 2009
117
27


Characterization of the nucleolar gene product, treacle, in Treacher Collins syndrome.
C Isaac, K L Marsh, W A Paznekas, J Dixon, M J Dixon, E W Jabs, U T Meier. Mol Biol Cell 2000
74
22

The NBS1-Treacle complex controls ribosomal RNA transcription in response to DNA damage.
Dorthe H Larsen, Flurina Hari, Julie A Clapperton, Myriam Gwerder, Katrin Gutsche, Matthias Altmeyer, Stephanie Jungmichel, Luis I Toledo, Daniel Fink, Maj-Britt Rask,[...]. Nat Cell Biol 2014
87
22

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics.
Shao-En Ong, Blagoy Blagoev, Irina Kratchmarova, Dan Bach Kristensen, Hanno Steen, Akhilesh Pandey, Matthias Mann. Mol Cell Proteomics 2002
16

Novel mutations of TCOF1 gene in European patients with Treacher Collins syndrome.
Chiara Conte, Maria Rosaria D'Apice, Fabrizio Rinaldi, Stefano Gambardella, Federica Sangiuolo, Giuseppe Novelli. BMC Med Genet 2011
20
16


Prevention of Treacher Collins syndrome craniofacial anomalies in mouse models via maternal antioxidant supplementation.
Daisuke Sakai, Jill Dixon, Annita Achilleos, Michael Dixon, Paul A Trainor. Nat Commun 2016
52
16


Stable isotope labeling by amino acids in cell culture (SILAC) and quantitative comparison of the membrane proteomes of self-renewing and differentiating human embryonic stem cells.
Tatyana A Prokhorova, Kristoffer T G Rigbolt, Pia T Johansen, Jeanette Henningsen, Irina Kratchmarova, Moustapha Kassem, Blagoy Blagoev. Mol Cell Proteomics 2009
94
11

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents.
Philip L Ross, Yulin N Huang, Jason N Marchese, Brian Williamson, Kenneth Parker, Stephen Hattan, Nikita Khainovski, Sasi Pillai, Subhakar Dey, Scott Daniels,[...]. Mol Cell Proteomics 2004
11


Functional and quantitative proteomics using SILAC.
Matthias Mann. Nat Rev Mol Cell Biol 2006
692
11

Super-SILAC mix for quantitative proteomics of human tumor tissue.
Tamar Geiger, Juergen Cox, Pawel Ostasiewicz, Jacek R Wisniewski, Matthias Mann. Nat Methods 2010
370
11

Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research.
Patrick A Everley, Jeroen Krijgsveld, Bruce R Zetter, Steven P Gygi. Mol Cell Proteomics 2004
165
11

Application of the SILAC (stable isotope labelling with amino acids in cell culture) technique in quantitative comparisons for tissue proteome expression.
Yuhuan Xu, Shufang Liang, Guobo Shen, Xuejiao Xu, Qingping Liu, Zhizhong Xu, Fengming Gong, Minghai Tang, Yuquan Wei. Biotechnol Appl Biochem 2009
15
13

Regulation of polyamine metabolism by translational control.
Oscar Perez-Leal, Salim Merali. Amino Acids 2012
49
11


Genetically altered expression of spermidine/spermine N1-acetyltransferase affects fat metabolism in mice via acetyl-CoA.
Jason Jell, Salim Merali, Mary L Hensen, Richard Mazurchuk, Joseph A Spernyak, Paula Diegelman, Nicholas D Kisiel, Carlos Barrero, Kristin K Deeb, Leena Alhonen,[...]. J Biol Chem 2007
86
11


Polyamine metabolism and function.
A E Pegg, P P McCann. Am J Physiol 1982
11


The ATM repair pathway inhibits RNA polymerase I transcription in response to chromosome breaks.
Michael Kruhlak, Elizabeth E Crouch, Marika Orlov, Carolina Montaño, Stanislaw A Gorski, André Nussenzweig, Tom Misteli, Robert D Phair, Rafael Casellas. Nature 2007
204
11

mTOR-dependent regulation of ribosomal gene transcription requires S6K1 and is mediated by phosphorylation of the carboxy-terminal activation domain of the nucleolar transcription factor UBF.
Katherine M Hannan, Yves Brandenburger, Anna Jenkins, Kerith Sharkey, Alice Cavanaugh, Lawrence Rothblum, Tom Moss, Gretchen Poortinga, Grant A McArthur, Richard B Pearson,[...]. Mol Cell Biol 2003
312
11

Ribosomopathies: human disorders of ribosome dysfunction.
Anupama Narla, Benjamin L Ebert. Blood 2010
508
11

Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells.
Tania Bose, Kenneth K Lee, Shuai Lu, Baoshan Xu, Bethany Harris, Brian Slaughter, Jay Unruh, Alexander Garrett, William McDowell, Andrew Box,[...]. PLoS Genet 2012
70
11

Anticancer activity of CX-3543: a direct inhibitor of rRNA biogenesis.
Denis Drygin, Adam Siddiqui-Jain, Sean O'Brien, Michael Schwaebe, Amy Lin, Josh Bliesath, Caroline B Ho, Chris Proffitt, Katy Trent, Jeffrey P Whitten,[...]. Cancer Res 2009
342
11


Targeted disruption of the ribosomal protein S19 gene is lethal prior to implantation.
Hans Matsson, Edward J Davey, Natalia Draptchinskaia, Isao Hamaguchi, Andreas Ooka, Per Levéen, Erik Forsberg, Stefan Karlsson, Niklas Dahl. Mol Cell Biol 2004
122
11


The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components.
Arnaud Laferté, Emmanuel Favry, André Sentenac, Michel Riva, Christophe Carles, Stéphane Chédin. Genes Dev 2006
141
11

Treacle recruits RNA polymerase I complex to the nucleolus that is independent of UBF.
Chen-I Lin, Ning-Hsing Yeh. Biochem Biophys Res Commun 2009
27
11

The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Ψ1191 in yeast 18S rRNA.
Britta Meyer, Jan Philip Wurm, Peter Kötter, Matthias S Leisegang, Valeska Schilling, Markus Buchhaupt, Martin Held, Ute Bahr, Michael Karas, Alexander Heckel,[...]. Nucleic Acids Res 2011
76
11


Novel insertion in exon 5 of the TCOF1 gene in twin sisters with Treacher Collins syndrome.
Bożena Anna Marszałek-Kruk, Piotr Wójcicki, Robert Smigiel, Wiesław H Trzeciak. J Appl Genet 2012
6
33

MS Data Miner: a web-based software tool to analyze, compare, and share mass spectrometry protein identifications.
Thomas F Dyrlund, Ebbe T Poulsen, Carsten Scavenius, Kristian W Sanggaard, Jan J Enghild. Proteomics 2012
41
11


DHODH modulates transcriptional elongation in the neural crest and melanoma.
Richard Mark White, Jennifer Cech, Sutheera Ratanasirintrawoot, Charles Y Lin, Peter B Rahl, Christopher J Burke, Erin Langdon, Matthew L Tomlinson, Jack Mosher, Charles Kaufman,[...]. Nature 2011
309
11

The mandibulofacial dysostosis; a new hereditary syndrome.
A FRANCESCHETTI, D KLEIN. Acta Ophthalmol (Copenh) 1949
126
11


Exome sequencing identifies the cause of a mendelian disorder.
Sarah B Ng, Kati J Buckingham, Choli Lee, Abigail W Bigham, Holly K Tabor, Karin M Dent, Chad D Huff, Paul T Shannon, Ethylin Wang Jabs, Deborah A Nickerson,[...]. Nat Genet 2010
11

High mutation detection rate in TCOF1 among Treacher Collins syndrome patients reveals clustering of mutations and 16 novel pathogenic changes.
A Splendore, E O Silva, L G Alonso, A Richieri-Costa, N Alonso, A Rosa, G Carakushanky, D P Cavalcanti, D Brunoni, M R Passos-Bueno. Hum Mutat 2000
79
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.