A citation-based method for searching scientific literature

Magdalena M Dailey, M Clarke Miller, Paula J Bates, Andrew N Lane, John O Trent. Nucleic Acids Res 2010
Times Cited: 97







List of co-cited articles
1231 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Discovery and development of the G-rich oligonucleotide AS1411 as a novel treatment for cancer.
Paula J Bates, Damian A Laber, Donald M Miller, Shelia D Thomas, John O Trent. Exp Mol Pathol 2009
483
26

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
22

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
21

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
20

G-quadruplex oligonucleotide AS1411 as a cancer-targeting agent: Uses and mechanisms.
Paula J Bates, Elsa M Reyes-Reyes, Mohammad T Malik, Emily M Murphy, Martin G O'Toole, John O Trent. Biochim Biophys Acta Gen Subj 2017
122
20

Circular dichroism and conformational polymorphism of DNA.
Jaroslav Kypr, Iva Kejnovská, Daniel Renciuk, Michaela Vorlícková. Nucleic Acids Res 2009
922
19

Biophysical and biological properties of quadruplex oligodeoxyribonucleotides.
Virna Dapić, Vedra Abdomerović, Rachel Marrington, Jemma Peberdy, Alison Rodger, John O Trent, Paula J Bates. Nucleic Acids Res 2003
303
18


Topological characterization of nucleic acid G-quadruplexes by UV absorption and circular dichroism.
Andreas Ioannis Karsisiotis, Nason Ma'ani Hessari, Ettore Novellino, Gian Piero Spada, Antonio Randazzo, Mateus Webba da Silva. Angew Chem Int Ed Engl 2011
251
18

A phase II trial of AS1411 (a novel nucleolin-targeted DNA aptamer) in metastatic renal cell carcinoma.
Jonathan E Rosenberg, Richard M Bambury, Eliezer M Van Allen, Harry A Drabkin, Primo N Lara, Andrea L Harzstark, Nikhil Wagle, Robert A Figlin, Gregory W Smith, Levi A Garraway,[...]. Invest New Drugs 2014
190
18

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
781
17

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
17

Stability and kinetics of G-quadruplex structures.
Andrew N Lane, J Brad Chaires, Robert D Gray, John O Trent. Nucleic Acids Res 2008
468
16

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
16

Hydration is a major determinant of the G-quadruplex stability and conformation of the human telomere 3' sequence of d(AG3(TTAG3)3).
M Clarke Miller, Robert Buscaglia, Jonathan B Chaires, Andrew N Lane, John O Trent. J Am Chem Soc 2010
153
16

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
840
16

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
16

Circular dichroism and guanine quadruplexes.
Michaela Vorlíčková, Iva Kejnovská, Janos Sagi, Daniel Renčiuk, Klára Bednářová, Jitka Motlová, Jaroslav Kypr. Methods 2012
256
16

Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold.
Kim Ngoc Luu, Anh Tuân Phan, Vitaly Kuryavyi, Laurent Lacroix, Dinshaw J Patel. J Am Chem Soc 2006
585
15


Antiproliferative activity of G-rich oligonucleotides correlates with protein binding.
P J Bates, J B Kahlon, S D Thomas, J O Trent, D M Miller. J Biol Chem 1999
282
15

Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal.
Jing Li, John J Correia, Lei Wang, John O Trent, Jonathan B Chaires. Nucleic Acids Res 2005
283
14

Thermal difference spectra: a specific signature for nucleic acid structures.
Jean-Louis Mergny, Jing Li, Laurent Lacroix, Samir Amrane, Jonathan B Chaires. Nucleic Acids Res 2005
286
14

G-quadruplex structure of an anti-proliferative DNA sequence.
Ngoc Quang Do, Wan Jun Chung, Thi Hong Anh Truong, Brahim Heddi, Anh Tuân Phan. Nucleic Acids Res 2017
41
34

Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
345
13


Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Anh Tuân Phan, Vitaly Kuryavyi, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2007
355
13

Energetics and kinetics of a conformational switch in G-quadruplex DNA.
Robert D Gray, Jing Li, Jonathan B Chaires. J Phys Chem B 2009
102
13

Polymorphism of human telomeric quadruplex structures.
Jixun Dai, Megan Carver, Danzhou Yang. Biochimie 2008
293
13

Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution.
R F Macaya, P Schultze, F W Smith, J A Roe, J Feigon. Proc Natl Acad Sci U S A 1993
669
13

Mechanistic studies of anticancer aptamer AS1411 reveal a novel role for nucleolin in regulating Rac1 activation.
E Merit Reyes-Reyes, Francesca R Šalipur, Mitra Shams, Matthew K Forsthoefel, Paula J Bates. Mol Oncol 2015
84
15

Human telomeric DNA forms parallel-stranded intramolecular G-quadruplex in K+ solution under molecular crowding condition.
Yong Xue, Zhong-yuan Kan, Quan Wang, Yuan Yao, Jiang Liu, Yu-hua Hao, Zheng Tan. J Am Chem Soc 2007
216
12

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
686
12

Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.
Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
324
12


Structural insights into G-quadruplexes: towards new anticancer drugs.
Danzhou Yang, Keika Okamoto. Future Med Chem 2010
222
12

G-quadruplex DNA assemblies: loop length, cation identity, and multimer formation.
Nicolas Smargiasso, Frédéric Rosu, Wei Hsia, Pierre Colson, Erin Shammel Baker, Michael T Bowers, Edwin De Pauw, Valérie Gabelica. J Am Chem Soc 2008
190
12

Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity.
Ngoc Quang Do, Kah Wai Lim, Ming Hoon Teo, Brahim Heddi, Anh Tuân Phan. Nucleic Acids Res 2011
129
12


AGRO100 inhibits activation of nuclear factor-kappaB (NF-kappaB) by forming a complex with NF-kappaB essential modulator (NEMO) and nucleolin.
Allicia C Girvan, Yun Teng, Lavona K Casson, Shelia D Thomas, Simone Jüliger, Mark W Ball, Jon B Klein, William M Pierce, Shirish S Barve, Paula J Bates. Mol Cancer Ther 2006
166
12

High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity.
Irene Russo Krauss, Antonello Merlino, Antonio Randazzo, Ettore Novellino, Lelio Mazzarella, Filomena Sica. Nucleic Acids Res 2012
156
12

An interlocked dimeric parallel-stranded DNA quadruplex: a potent inhibitor of HIV-1 integrase.
Anh Tuân Phan, Vitaly Kuryavyi, Jin-Biao Ma, Aurélie Faure, Marie-Line Andréola, Dinshaw J Patel. Proc Natl Acad Sci U S A 2005
182
11

A non-empirical chromophoric interpretation of CD spectra of DNA G-quadruplex structures.
Stefano Masiero, Roberta Trotta, Silvia Pieraccini, Stefano De Tito, Rosaria Perone, Antonio Randazzo, Gian Piero Spada. Org Biomol Chem 2010
193
11


How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
264
11

Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter.
Anh Tuân Phan, Yasha S Modi, Dinshaw J Patel. J Am Chem Soc 2004
395
11

Structure of human telomeric DNA in crowded solution.
Brahim Heddi, Anh Tuân Phan. J Am Chem Soc 2011
214
11

Aptamer-based tumor-targeted drug delivery for photodynamic therapy.
Yen-An Shieh, Shu-Jyuan Yang, Ming-Feng Wei, Ming-Jium Shieh. ACS Nano 2010
197
11




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.