A citation-based method for searching scientific literature

Béatrice Clouet-d'Orval, Dana Rinaldi, Yves Quentin, Agamemnon J Carpousis. J Biol Chem 2010
Times Cited: 35







List of co-cited articles
336 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.
Sergine Even, Olivier Pellegrini, Lena Zig, Valerie Labas, Joelle Vinh, Dominique Bréchemmier-Baey, Harald Putzer. Nucleic Acids Res 2005
231
68

Structural insights into the dual activity of RNase J.
Inés Li de la Sierra-Gallay, Léna Zig, Ailar Jamalli, Harald Putzer. Nat Struct Mol Biol 2008
132
60

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA.
Nathalie Mathy, Lionel Bénard, Olivier Pellegrini, Roula Daou, Tingyi Wen, Ciarán Condon. Cell 2007
253
57


Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family.
Isabelle Callebaut, Despina Moshous, Jean-Paul Mornon, Jean-Pierre de Villartay. Nucleic Acids Res 2002
233
45

RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis.
Karen Shahbabian, Ailar Jamalli, Léna Zig, Harald Putzer. EMBO J 2009
173
34

mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale.
Ulrike Mäder, Léna Zig, Julia Kretschmer, Georg Homuth, Harald Putzer. Mol Microbiol 2008
87
34

Archaeal β-CASP ribonucleases of the aCPSF1 family are orthologs of the eukaryal CPSF-73 factor.
Duy Khanh Phung, Dana Rinaldi, Petra S Langendijk-Genevaux, Yves Quentin, Agamemnon J Carpousis, Béatrice Clouet-d'Orval. Nucleic Acids Res 2013
28
42


Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase J.
Audrey Dorléans, Inés Li de la Sierra-Gallay, Jérémie Piton, Léna Zig, Laetitia Gilet, Harald Putzer, Ciarán Condon. Structure 2011
52
31



RNA degradation in Archaea and Gram-negative bacteria different from Escherichia coli.
Elena Evguenieva-Hackenberg, Gabriele Klug. Prog Mol Biol Transl Sci 2009
39
28

Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour.
Nathalie Mathy, Agnès Hébert, Peggy Mervelet, Lionel Bénard, Audrey Dorléans, Inés Li de la Sierra-Gallay, Philippe Noirot, Harald Putzer, Ciarán Condon. Mol Microbiol 2010
84
28

Unusual, dual endo- and exonuclease activity in the degradosome explained by crystal structure analysis of RNase J1.
Joseph A Newman, Lorraine Hewitt, Cecilia Rodrigues, Alexandra Solovyova, Colin R Harwood, Richard J Lewis. Structure 2011
39
28

Distinct activities of several RNase J proteins in methanogenic archaea.
Shiri Levy, Victoria Portnoy, Jasmine Admon, Gadi Schuster. RNA Biol 2011
24
41

Translation initiation factor a/eIF2(-gamma) counteracts 5' to 3' mRNA decay in the archaeon Sulfolobus solfataricus.
David Hasenöhrl, Tania Lombo, Vladimir Kaberdin, Paola Londei, Udo Bläsi. Proc Natl Acad Sci U S A 2008
41
25


Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1.
Robert A Britton, Tingyi Wen, Laura Schaefer, Olivier Pellegrini, William C Uicker, Nathalie Mathy, Crystal Tobin, Roula Daou, Jacek Szyk, Ciarán Condon. Mol Microbiol 2007
113
25

Structure and activity of a novel archaeal β-CASP protein with N-terminal KH domains.
Ana P G Silva, Maria Chechik, Robert T Byrne, David G Waterman, C Leong Ng, Eleanor J Dodson, Eugene V Koonin, Alfred A Antson, Callum Smits. Structure 2011
20
45

The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex.
Martin Lehnik-Habrink, Henrike Pförtner, Leonie Rempeters, Nico Pietack, Christina Herzberg, Jörg Stülke. Mol Microbiol 2010
103
22

Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease.
Corey R Mandel, Syuzo Kaneko, Hailong Zhang, Damara Gebauer, Vasupradha Vethantham, James L Manley, Liang Tong. Nature 2006
288
22

Studies of the 5' exonuclease and endonuclease activities of CPSF-73 in histone pre-mRNA processing.
Xiao-cui Yang, Kelly D Sullivan, William F Marzluff, Zbigniew Dominski. Mol Cell Biol 2009
49
22


The archaeal exosome core is a hexameric ring structure with three catalytic subunits.
Esben Lorentzen, Pamela Walter, Sebastien Fribourg, Elena Evguenieva-Hackenberg, Gabriele Klug, Elena Conti. Nat Struct Mol Biol 2005
172
22

Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing.
Fabian M Commichau, Fabian M Rothe, Christina Herzberg, Eva Wagner, Daniel Hellwig, Martin Lehnik-Habrink, Elke Hammer, Uwe Völker, Jörg Stülke. Mol Cell Proteomics 2009
179
20

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal.
Helena Celesnik, Atilio Deana, Joel G Belasco. Mol Cell 2007
184
20

An exosome-like complex in Sulfolobus solfataricus.
Elena Evguenieva-Hackenberg, Pamela Walter, Elizabeth Hochleitner, Friedrich Lottspeich, Gabriele Klug. EMBO Rep 2003
113
20

Endonucleolytic initiation of mRNA decay in Escherichia coli.
Agamemnon J Carpousis, Ben F Luisi, Kenneth J McDowall. Prog Mol Biol Transl Sci 2009
117
20

Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii.
Yuya Nishida, Hirohito Ishikawa, Seiki Baba, Noriko Nakagawa, Seiki Kuramitsu, Ryoji Masui. Proteins 2010
16
43


Crystal structure of a dimeric archaeal cleavage and polyadenylation specificity factor.
Bijàn Mir-Montazeri, Moritz Ammelburg, Dara Forouzan, Andrei N Lupas, Marcus D Hartmann. J Struct Biol 2011
21
33

An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.
Jamie Richards, Quansheng Liu, Olivier Pellegrini, Helena Celesnik, Shiyi Yao, David H Bechhofer, Ciarán Condon, Joel G Belasco. Mol Cell 2011
80
20



Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.
Anastasia J Callaghan, Maria Jose Marcaida, Jonathan A Stead, Kenneth J McDowall, William G Scott, Ben F Luisi. Nature 2005
205
17

RNase J is involved in the 5'-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti.
Ramakanth Madhugiri, Elena Evguenieva-Hackenberg. FEBS Lett 2009
36
17



The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn.
Sophie Nolivos, Agamemnon J Carpousis, Béatrice Clouet-d'Orval. Nucleic Acids Res 2005
63
17



The hunt for the 3' endonuclease.
Zbigniew Dominski. Wiley Interdiscip Rev RNA 2010
18
33

Chloroplast RNase J compensates for inefficient transcription termination by removal of antisense RNA.
Robert E Sharwood, Michal Halpert, Scott Luro, Gadi Schuster, David B Stern. RNA 2011
47
17

Three essential ribonucleases-RNase Y, J1, and III-control the abundance of a majority of Bacillus subtilis mRNAs.
Sylvain Durand, Laetitia Gilet, Philippe Bessières, Pierre Nicolas, Ciarán Condon. PLoS Genet 2012
100
17


A single-base resolution map of an archaeal transcriptome.
Omri Wurtzel, Rajat Sapra, Feng Chen, Yiwen Zhu, Blake A Simmons, Rotem Sorek. Genome Res 2010
276
14


The critical role of RNA processing and degradation in the control of gene expression.
Cecília M Arraiano, José M Andrade, Susana Domingues, Inês B Guinote, Michal Malecki, Rute G Matos, Ricardo N Moreira, Vânia Pobre, Filipa P Reis, Margarida Saramago,[...]. FEMS Microbiol Rev 2010
230
14



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.