A citation-based method for searching scientific literature

Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
Times Cited: 1623







List of co-cited articles
346 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




FSL.
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
16

Denoising of diffusion MRI using random matrix theory.
Jelle Veraart, Dmitry S Novikov, Daan Christiaens, Benjamin Ades-Aron, Jan Sijbers, Els Fieremans. Neuroimage 2016
437
16


A reproducible evaluation of ANTs similarity metric performance in brain image registration.
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, James C Gee. Neuroimage 2011
14

MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation.
J-Donald Tournier, Robert Smith, David Raffelt, Rami Tabbara, Thijs Dhollander, Maximilian Pietsch, Daan Christiaens, Ben Jeurissen, Chun-Hung Yeh, Alan Connelly. Neuroimage 2019
350
12


fMRIPrep: a robust preprocessing pipeline for functional MRI.
Oscar Esteban, Christopher J Markiewicz, Ross W Blair, Craig A Moodie, A Ilkay Isik, Asier Erramuzpe, James D Kent, Mathias Goncalves, Elizabeth DuPre, Madeleine Snyder,[...]. Nat Methods 2019
385
12

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.
Krzysztof Gorgolewski, Christopher D Burns, Cindee Madison, Dav Clark, Yaroslav O Halchenko, Michael L Waskom, Satrajit S Ghosh. Front Neuroinform 2011
547
12

Advances in functional and structural MR image analysis and implementation as FSL.
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
11


User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability.
Paul A Yushkevich, Joseph Piven, Heather Cody Hazlett, Rachel Gimpel Smith, Sean Ho, James C Gee, Guido Gerig. Neuroimage 2006
10


Gibbs-ringing artifact removal based on local subvoxel-shifts.
Elias Kellner, Bibek Dhital, Valerij G Kiselev, Marco Reisert. Magn Reson Med 2016
326
9


An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
8

Diffusion MRI noise mapping using random matrix theory.
Jelle Veraart, Els Fieremans, Dmitry S Novikov. Magn Reson Med 2016
215
8

Mindboggling morphometry of human brains.
Arno Klein, Satrajit S Ghosh, Forrest S Bao, Joachim Giard, Yrjö Häme, Eliezer Stavsky, Noah Lee, Brian Rossa, Martin Reuter, Elias Chaibub Neto,[...]. PLoS Comput Biol 2017
121
8


Improved optimization for the robust and accurate linear registration and motion correction of brain images.
Mark Jenkinson, Peter Bannister, Michael Brady, Stephen Smith. Neuroimage 2002
7

3D Slicer as an image computing platform for the Quantitative Imaging Network.
Andriy Fedorov, Reinhard Beichel, Jayashree Kalpathy-Cramer, Julien Finet, Jean-Christophe Fillion-Robin, Sonia Pujol, Christian Bauer, Dominique Jennings, Fiona Fennessy, Milan Sonka,[...]. Magn Reson Imaging 2012
7

Voxel-based morphometry--the methods.
J Ashburner, K J Friston. Neuroimage 2000
7


Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.
Ben Jeurissen, Jacques-Donald Tournier, Thijs Dhollander, Alan Connelly, Jan Sijbers. Neuroimage 2014
402
6

Fast robust automated brain extraction.
Stephen M Smith. Hum Brain Mapp 2002
6

Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements.
Nicholas J Tustison, Philip A Cook, Arno Klein, Gang Song, Sandhitsu R Das, Jeffrey T Duda, Benjamin M Kandel, Niels van Strien, James R Stone, James C Gee,[...]. Neuroimage 2014
272
6

Permutation inference for the general linear model.
Anderson M Winkler, Gerard R Ridgway, Matthew A Webster, Stephen M Smith, Thomas E Nichols. Neuroimage 2014
6

The minimal preprocessing pipelines for the Human Connectome Project.
Matthew F Glasser, Stamatios N Sotiropoulos, J Anthony Wilson, Timothy S Coalson, Bruce Fischl, Jesper L Andersson, Junqian Xu, Saad Jbabdi, Matthew Webster, Jonathan R Polimeni,[...]. Neuroimage 2013
6

Unbiased average age-appropriate atlases for pediatric studies.
Vladimir Fonov, Alan C Evans, Kelly Botteron, C Robert Almli, Robert C McKinstry, D Louis Collins. Neuroimage 2011
906
6

FreeSurfer.
Bruce Fischl. Neuroimage 2012
6

Methods to detect, characterize, and remove motion artifact in resting state fMRI.
Jonathan D Power, Anish Mitra, Timothy O Laumann, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2014
6

Machine learning for neuroimaging with scikit-learn.
Alexandre Abraham, Fabian Pedregosa, Michael Eickenberg, Philippe Gervais, Andreas Mueller, Jean Kossaifi, Alexandre Gramfort, Bertrand Thirion, Gaël Varoquaux. Front Neuroinform 2014
401
6

MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection.
Jimit Doshi, Guray Erus, Yangming Ou, Susan M Resnick, Ruben C Gur, Raquel E Gur, Theodore D Satterthwaite, Susan Furth, Christos Davatzikos. Neuroimage 2016
92
5

Multi-atlas skull-stripping.
Jimit Doshi, Guray Erus, Yangming Ou, Bilwaj Gaonkar, Christos Davatzikos. Acad Radiol 2013
104
5

NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain.
Hui Zhang, Torben Schneider, Claudia A Wheeler-Kingshott, Daniel C Alexander. Neuroimage 2012
5

SIFT: Spherical-deconvolution informed filtering of tractograms.
Robert E Smith, Jacques-Donald Tournier, Fernando Calamante, Alan Connelly. Neuroimage 2013
298
5


Computational Radiomics System to Decode the Radiographic Phenotype.
Joost J M van Griethuysen, Andriy Fedorov, Chintan Parmar, Ahmed Hosny, Nicole Aucoin, Vivek Narayan, Regina G H Beets-Tan, Jean-Christophe Fillion-Robin, Steve Pieper, Hugo J W L Aerts. Cancer Res 2017
5


A component based noise correction method (CompCor) for BOLD and perfusion based fMRI.
Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T Liu. Neuroimage 2007
5

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation.
Konstantinos Kamnitsas, Christian Ledig, Virginia F J Newcombe, Joanna P Simpson, Andrew D Kane, David K Menon, Daniel Rueckert, Ben Glocker. Med Image Anal 2017
656
5

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).
Bjoern H Menze, Andras Jakab, Stefan Bauer, Jayashree Kalpathy-Cramer, Keyvan Farahani, Justin Kirby, Yuliya Burren, Nicole Porz, Johannes Slotboom, Roland Wiest,[...]. IEEE Trans Med Imaging 2015
648
5

Multi-Atlas Segmentation with Joint Label Fusion.
Hongzhi Wang, Jung W Suh, Sandhitsu R Das, John B Pluta, Caryne Craige, Paul A Yushkevich. IEEE Trans Pattern Anal Mach Intell 2013
386
4

Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan.
Raymond Pomponio, Guray Erus, Mohamad Habes, Jimit Doshi, Dhivya Srinivasan, Elizabeth Mamourian, Vishnu Bashyam, Ilya M Nasrallah, Theodore D Satterthwaite, Yong Fan,[...]. Neuroimage 2020
41
9

Apparent Fibre Density: a novel measure for the analysis of diffusion-weighted magnetic resonance images.
David Raffelt, J-Donald Tournier, Stephen Rose, Gerard R Ridgway, Robert Henderson, Stuart Crozier, Olivier Salvado, Alan Connelly. Neuroimage 2012
281
4

Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction.
Matteo Bastiani, Michiel Cottaar, Sean P Fitzgibbon, Sana Suri, Fidel Alfaro-Almagro, Stamatios N Sotiropoulos, Saad Jbabdi, Jesper L R Andersson. Neuroimage 2019
57
7

Investigating white matter fibre density and morphology using fixel-based analysis.
David A Raffelt, J-Donald Tournier, Robert E Smith, David N Vaughan, Graeme Jackson, Gerard R Ridgway, Alan Connelly. Neuroimage 2017
191
4


Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.
J-Donald Tournier, Fernando Calamante, David G Gadian, Alan Connelly. Neuroimage 2004
882
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.