A citation-based method for searching scientific literature

Shiyi Yao, David H Bechhofer. J Bacteriol 2010
Times Cited: 44







List of co-cited articles
552 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis.
Karen Shahbabian, Ailar Jamalli, Léna Zig, Harald Putzer. EMBO J 2009
176
90

Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing.
Fabian M Commichau, Fabian M Rothe, Christina Herzberg, Eva Wagner, Daniel Hellwig, Martin Lehnik-Habrink, Elke Hammer, Uwe Völker, Jörg Stülke. Mol Cell Proteomics 2009
180
72

Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.
Sergine Even, Olivier Pellegrini, Lena Zig, Valerie Labas, Joelle Vinh, Dominique Bréchemmier-Baey, Harald Putzer. Nucleic Acids Res 2005
231
59

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA.
Nathalie Mathy, Lionel Bénard, Olivier Pellegrini, Roula Daou, Tingyi Wen, Ciarán Condon. Cell 2007
254
50

The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex.
Martin Lehnik-Habrink, Henrike Pförtner, Leonie Rempeters, Nico Pietack, Christina Herzberg, Jörg Stülke. Mol Microbiol 2010
106
50

Structural insights into the dual activity of RNase J.
Inés Li de la Sierra-Gallay, Léna Zig, Ailar Jamalli, Harald Putzer. Nat Struct Mol Biol 2008
132
47

mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale.
Ulrike Mäder, Léna Zig, Julia Kretschmer, Georg Homuth, Harald Putzer. Mol Microbiol 2008
87
45

Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour.
Nathalie Mathy, Agnès Hébert, Peggy Mervelet, Lionel Bénard, Audrey Dorléans, Inés Li de la Sierra-Gallay, Philippe Noirot, Harald Putzer, Ciarán Condon. Mol Microbiol 2010
85
40

An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.
Jamie Richards, Quansheng Liu, Olivier Pellegrini, Helena Celesnik, Shiyi Yao, David H Bechhofer, Ciarán Condon, Joel G Belasco. Mol Cell 2011
82
40

Three essential ribonucleases-RNase Y, J1, and III-control the abundance of a majority of Bacillus subtilis mRNAs.
Sylvain Durand, Laetitia Gilet, Philippe Bessières, Pierre Nicolas, Ciarán Condon. PLoS Genet 2012
102
40

RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y.
Martin Lehnik-Habrink, Marc Schaffer, Ulrike Mäder, Christine Diethmaier, Christina Herzberg, Jörg Stülke. Mol Microbiol 2011
70
38


Functional analysis of 11 putative essential genes in Bacillus subtilis.
Alison Hunt, Joy P Rawlins, Helena B Thomaides, Jeff Errington. Microbiology (Reading) 2006
92
34

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal.
Helena Celesnik, Atilio Deana, Joel G Belasco. Mol Cell 2007
187
34



Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.
Anastasia J Callaghan, Maria Jose Marcaida, Jonathan A Stead, Kenneth J McDowall, William G Scott, Ben F Luisi. Nature 2005
208
31

Participation of 3'-to-5' exoribonucleases in the turnover of Bacillus subtilis mRNA.
Irina A Oussenko, Teppei Abe, Hiromi Ujiie, Akira Muto, David H Bechhofer. J Bacteriol 2005
84
31

Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1.
Robert A Britton, Tingyi Wen, Laura Schaefer, Olivier Pellegrini, William C Uicker, Nathalie Mathy, Crystal Tobin, Roula Daou, Jacek Szyk, Ciarán Condon. Mol Microbiol 2007
114
29


Endonucleolytic initiation of mRNA decay in Escherichia coli.
Agamemnon J Carpousis, Ben F Luisi, Kenneth J McDowall. Prog Mol Biol Transl Sci 2009
119
29

RNase Y in Bacillus subtilis: a Natively disordered protein that is the functional equivalent of RNase E from Escherichia coli.
Martin Lehnik-Habrink, Joseph Newman, Fabian M Rothe, Alexandra S Solovyova, Cecilia Rodrigues, Christina Herzberg, Fabian M Commichau, Richard J Lewis, Jörg Stülke. J Bacteriol 2011
78
29

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases.
Martin Lehnik-Habrink, Richard J Lewis, Ulrike Mäder, Jörg Stülke. Mol Microbiol 2012
81
29


Characterization of components of the Staphylococcus aureus mRNA degradosome holoenzyme-like complex.
Christelle M Roux, Jonathon P DeMuth, Paul M Dunman. J Bacteriol 2011
87
27



A DEAD-box RNA helicase in the Escherichia coli RNA degradosome.
B Py, C F Higgins, H M Krisch, A J Carpousis. Nature 1996
464
25

Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays.
Mark B Stead, Sarah Marshburn, Bijoy K Mohanty, Joydeep Mitra, Lourdes Pena Castillo, Debashish Ray, Harm van Bakel, Timothy R Hughes, Sidney R Kushner. Nucleic Acids Res 2011
91
25

Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1.
Roula Daou-Chabo, Nathalie Mathy, Lionel Bénard, Ciarán Condon. Mol Microbiol 2009
48
25

The RNase E of Escherichia coli is a membrane-binding protein.
Vanessa Khemici, Leonora Poljak, Ben F Luisi, Agamemnon J Carpousis. Mol Microbiol 2008
144
22


Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon.
Christoph Meinken, Hans-Matti Blencke, Holger Ludwig, Jörg Stülke. Microbiology (Reading) 2003
56
20



Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase J.
Audrey Dorléans, Inés Li de la Sierra-Gallay, Jérémie Piton, Léna Zig, Laetitia Gilet, Harald Putzer, Ciarán Condon. Structure 2011
54
20


Messenger RNA decay and maturation in Bacillus subtilis.
David H Bechhofer. Prog Mol Biol Transl Sci 2009
38
23

Unusual, dual endo- and exonuclease activity in the degradosome explained by crystal structure analysis of RNase J1.
Joseph A Newman, Lorraine Hewitt, Cecilia Rodrigues, Alexandra Solovyova, Colin R Harwood, Richard J Lewis. Structure 2011
39
23


Rapid cleavage of RNA by RNase E in the absence of 5' monophosphate stimulation.
Louise Kime, Stefanie S Jourdan, Jonathan A Stead, Ana Hidalgo-Sastre, Kenneth J McDowall. Mol Microbiol 2010
56
18


An RNA degradosome assembly in Caulobacter crescentus.
Steven W Hardwick, Vivian S Y Chan, R William Broadhurst, Ben F Luisi. Nucleic Acids Res 2011
62
18

Global analysis of Escherichia coli RNA degradosome function using DNA microarrays.
Jonathan A Bernstein, Pei-Hsun Lin, Stanley N Cohen, Sue Lin-Chao. Proc Natl Acad Sci U S A 2004
166
18

Polynucleotide phosphorylase activity may be modulated by metabolites in Escherichia coli.
Salima Nurmohamed, Helen A Vincent, Christopher M Titman, Vidya Chandran, Michael R Pears, Dijun Du, Julian L Griffin, Anastasia J Callaghan, Ben F Luisi. J Biol Chem 2011
45
18



Mechanism of mRNA destabilization by the glmS ribozyme.
Jennifer A Collins, Irnov Irnov, Stephanie Baker, Wade C Winkler. Genes Dev 2007
163
18

Initiation of decay of Bacillus subtilis trp leader RNA.
Gintaras Deikus, David H Bechhofer. J Biol Chem 2007
23
34

Phosphodiesterase activity of CvfA is required for virulence in Staphylococcus aureus.
Makiko Nagata, Chikara Kaito, Kazuhisa Sekimizu. J Biol Chem 2008
52
18


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.