A citation-based method for searching scientific literature

Johanna C Scheuermann, Andrés Gaytán de Ayala Alonso, Katarzyna Oktaba, Nga Ly-Hartig, Robert K McGinty, Sven Fraterman, Matthias Wilm, Tom W Muir, Jürg Müller. Nature 2010
Times Cited: 506







List of co-cited articles
1201 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


BAP1 and cancer.
Michele Carbone, Haining Yang, Harvey I Pass, Thomas Krausz, Joseph R Testa, Giovanni Gaudino. Nat Rev Cancer 2013
388
29

BAP1 complex promotes transcription by opposing PRC1-mediated H2A ubiquitylation.
Antoine Campagne, Ming-Kang Lee, Dina Zielinski, Audrey Michaud, Stéphanie Le Corre, Florent Dingli, Hong Chen, Lara Z Shahidian, Ivaylo Vassilev, Nicolas Servant,[...]. Nat Commun 2019
54
51

Loss of the tumor suppressor BAP1 causes myeloid transformation.
Anwesha Dey, Dhaya Seshasayee, Rajkumar Noubade, Dorothy M French, Jinfeng Liu, Mira S Chaurushiya, Donald S Kirkpatrick, Victoria C Pham, Jennie R Lill, Corey E Bakalarski,[...]. Science 2012
278
26

ASXL1 mutations promote myeloid transformation through loss of PRC2-mediated gene repression.
Omar Abdel-Wahab, Mazhar Adli, Lindsay M LaFave, Jie Gao, Todd Hricik, Alan H Shih, Suveg Pandey, Jay P Patel, Young Rock Chung, Richard Koche,[...]. Cancer Cell 2012
395
23

BAP1/ASXL1 recruitment and activation for H2A deubiquitination.
Danny D Sahtoe, Willem J van Dijk, Reggy Ekkebus, Huib Ovaa, Titia K Sixma. Nat Commun 2016
100
22

Frequent mutation of BAP1 in metastasizing uveal melanomas.
J William Harbour, Michael D Onken, Elisha D O Roberson, Shenghui Duan, Li Cao, Lori A Worley, M Laurin Council, Katie A Matatall, Cynthia Helms, Anne M Bowcock. Science 2010
894
21

Role of histone H2A ubiquitination in Polycomb silencing.
Hengbin Wang, Liangjun Wang, Hediye Erdjument-Bromage, Miguel Vidal, Paul Tempst, Richard S Jones, Yi Zhang. Nature 2004
21

The ubiquitin carboxyl hydrolase BAP1 forms a ternary complex with YY1 and HCF-1 and is a critical regulator of gene expression.
Helen Yu, Nazar Mashtalir, Salima Daou, Ian Hammond-Martel, Julie Ross, Guangchao Sui, Gerald W Hart, Frank J Rauscher, Elliot Drobetsky, Eric Milot,[...]. Mol Cell Biol 2010
177
20

The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma.
Matthew Bott, Marie Brevet, Barry S Taylor, Shigeki Shimizu, Tatsuo Ito, Lu Wang, Jenette Creaney, Richard A Lake, Maureen F Zakowski, Boris Reva,[...]. Nat Genet 2011
461
19

Cancer-associated ASXL1 mutations may act as gain-of-function mutations of the ASXL1-BAP1 complex.
Anand Balasubramani, Antti Larjo, Jed A Bassein, Xing Chang, Ryan B Hastie, Susan M Togher, Harri Lähdesmäki, Anjana Rao. Nat Commun 2015
118
19

Mutant ASXL1 cooperates with BAP1 to promote myeloid leukaemogenesis.
Shuhei Asada, Susumu Goyama, Daichi Inoue, Shiori Shikata, Reina Takeda, Tsuyoshi Fukushima, Taishi Yonezawa, Takeshi Fujino, Yasutaka Hayashi, Kimihito Cojin Kawabata,[...]. Nat Commun 2018
57
31

BAP1 loss defines a new class of renal cell carcinoma.
Samuel Peña-Llopis, Silvia Vega-Rubín-de-Celis, Arnold Liao, Nan Leng, Andrea Pavía-Jiménez, Shanshan Wang, Toshinari Yamasaki, Leah Zhrebker, Sharanya Sivanand, Patrick Spence,[...]. Nat Genet 2012
604
18

The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1.
Yuichi J Machida, Yuka Machida, Ajay A Vashisht, James A Wohlschlegel, Anindya Dutta. J Biol Chem 2009
178
17

Intrinsic apoptosis shapes the tumor spectrum linked to inactivation of the deubiquitinase BAP1.
Meng He, Mira S Chaurushiya, Joshua D Webster, Sarah Kummerfeld, Rohit Reja, Subhra Chaudhuri, Ying-Jiun Chen, Zora Modrusan, Benjamin Haley, Debra L Dugger,[...]. Science 2019
40
40

BAP1 regulates IP3R3-mediated Ca2+ flux to mitochondria suppressing cell transformation.
Angela Bononi, Carlotta Giorgi, Simone Patergnani, David Larson, Kaitlyn Verbruggen, Mika Tanji, Laura Pellegrini, Valentina Signorato, Federica Olivetto, Sandra Pastorino,[...]. Nature 2017
206
16

BAP1: a novel ubiquitin hydrolase which binds to the BRCA1 RING finger and enhances BRCA1-mediated cell growth suppression.
D E Jensen, M Proctor, S T Marquis, H P Gardner, S I Ha, L A Chodosh, A M Ishov, N Tommerup, H Vissing, Y Sekido,[...]. Oncogene 1998
512
15

Loss of BAP1 function leads to EZH2-dependent transformation.
Lindsay M LaFave, Wendy Béguelin, Richard Koche, Matt Teater, Barbara Spitzer, Alan Chramiec, Efthymia Papalexi, Matthew D Keller, Todd Hricik, Katerina Konstantinoff,[...]. Nat Med 2015
208
15

Gain of function of ASXL1 truncating protein in the pathogenesis of myeloid malignancies.
Hui Yang, Stefan Kurtenbach, Ying Guo, Ines Lohse, Michael A Durante, Jianping Li, Zhaomin Li, Hassan Al-Ali, Lingxiao Li, Zizhen Chen,[...]. Blood 2018
86
17

Tumor suppressor and deubiquitinase BAP1 promotes DNA double-strand break repair.
Helen Yu, Helen Pak, Ian Hammond-Martel, Mehdi Ghram, Amélie Rodrigue, Salima Daou, Haithem Barbour, Luc Corbeil, Josée Hébert, Elliot Drobetsky,[...]. Proc Natl Acad Sci U S A 2014
217
15

Histone H2AK119 Mono-Ubiquitination Is Essential for Polycomb-Mediated Transcriptional Repression.
Simone Tamburri, Elisa Lavarone, Daniel Fernández-Pérez, Eric Conway, Marika Zanotti, Daria Manganaro, Diego Pasini. Mol Cell 2020
111
15

Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo.
Omar Abdel-Wahab, Jie Gao, Mazhar Adli, Anwesha Dey, Thomas Trimarchi, Young Rock Chung, Cem Kuscu, Todd Hricik, Delphine Ndiaye-Lobry, Lindsay M Lafave,[...]. J Exp Med 2013
215
13

Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression.
Reinhard Kalb, Sebastian Latwiel, H Irem Baymaz, Pascal W T C Jansen, Christoph W Müller, Michiel Vermeulen, Jürg Müller. Nat Struct Mol Biol 2014
256
13

The BAP1/ASXL2 Histone H2A Deubiquitinase Complex Regulates Cell Proliferation and Is Disrupted in Cancer.
Salima Daou, Ian Hammond-Martel, Nazar Mashtalir, Haithem Barbour, Jessica Gagnon, Nicholas V G Iannantuono, Nadine Sen Nkwe, Alena Motorina, Helen Pak, Helen Yu,[...]. J Biol Chem 2015
63
19

Association of C-terminal ubiquitin hydrolase BRCA1-associated protein 1 with cell cycle regulator host cell factor 1.
Shahram Misaghi, Søren Ottosen, Anita Izrael-Tomasevic, David Arnott, Mohamed Lamkanfi, James Lee, Jinfeng Liu, Karen O'Rourke, Vishva M Dixit, Angus C Wilson. Mol Cell Biol 2009
152
12

BRCA1-associated protein-1 is a tumor suppressor that requires deubiquitinating activity and nuclear localization.
Karen H Ventii, Narra S Devi, Kenneth L Friedrich, Tatiana A Chernova, Mourad Tighiouart, Erwin G Van Meir, Keith D Wilkinson. Cancer Res 2008
234
12

BAP1 links metabolic regulation of ferroptosis to tumour suppression.
Yilei Zhang, Jiejun Shi, Xiaoguang Liu, Li Feng, Zihua Gong, Pranavi Koppula, Kapil Sirohi, Xu Li, Yongkun Wei, Hyemin Lee,[...]. Nat Cell Biol 2018
271
12

BAP1 promotes breast cancer cell proliferation and metastasis by deubiquitinating KLF5.
Junying Qin, Zhongmei Zhou, Wenlin Chen, Chunyan Wang, Hailin Zhang, Guangzhe Ge, Ming Shao, Dingyun You, Zhixiang Fan, Houjun Xia,[...]. Nat Commun 2015
97
11

Expression of mutant Asxl1 perturbs hematopoiesis and promotes susceptibility to leukemic transformation.
Reina Nagase, Daichi Inoue, Alessandro Pastore, Takeshi Fujino, Hsin-An Hou, Norimasa Yamasaki, Susumu Goyama, Makoto Saika, Akinori Kanai, Yasuyuki Sera,[...]. J Exp Med 2018
71
15

Genome Regulation by Polycomb and Trithorax: 70 Years and Counting.
Bernd Schuettengruber, Henri-Marc Bourbon, Luciano Di Croce, Giacomo Cavalli. Cell 2017
436
11

Germline BAP1 mutations predispose to malignant mesothelioma.
Joseph R Testa, Mitchell Cheung, Jianming Pei, Jennifer E Below, Yinfei Tan, Eleonora Sementino, Nancy J Cox, A Umran Dogan, Harvey I Pass, Sandra Trusa,[...]. Nat Genet 2011
634
11

Variant PRC1 complex-dependent H2A ubiquitylation drives PRC2 recruitment and polycomb domain formation.
Neil P Blackledge, Anca M Farcas, Takashi Kondo, Hamish W King, Joanna F McGouran, Lars L P Hanssen, Shinsuke Ito, Sarah Cooper, Kaori Kondo, Yoko Koseki,[...]. Cell 2014
440
11

A High-Density Map for Navigating the Human Polycomb Complexome.
Simon Hauri, Federico Comoglio, Makiko Seimiya, Moritz Gerstung, Timo Glatter, Klaus Hansen, Ruedi Aebersold, Renato Paro, Matthias Gstaiger, Christian Beisel. Cell Rep 2016
133
11

Jarid2 binds mono-ubiquitylated H2A lysine 119 to mediate crosstalk between Polycomb complexes PRC1 and PRC2.
Sarah Cooper, Anne Grijzenhout, Elizabeth Underwood, Katia Ancelin, Tianyi Zhang, Tatyana B Nesterova, Burcu Anil-Kirmizitas, Andrew Bassett, Susanne M Kooistra, Karl Agger,[...]. Nat Commun 2016
136
11

BRCA1-associated protein 1 interferes with BRCA1/BARD1 RING heterodimer activity.
Hiroyuki Nishikawa, Wenwen Wu, Ayaka Koike, Ryoko Kojima, Hiromichi Gomi, Mamoru Fukuda, Tomohiko Ohta. Cancer Res 2009
133
10

Defining the human deubiquitinating enzyme interaction landscape.
Mathew E Sowa, Eric J Bennett, Steven P Gygi, J Wade Harper. Cell 2009
10

Molecular architecture of polycomb repressive complexes.
Emily C Chittock, Sebastian Latwiel, Thomas C R Miller, Christoph W Müller. Biochem Soc Trans 2017
101
10

BRCA1-associated protein 1 (BAP1) deubiquitinase antagonizes the ubiquitin-mediated activation of FoxK2 target genes.
Yuki Okino, Yuka Machida, Sarah Frankland-Searby, Yuichi J Machida. J Biol Chem 2015
43
23

ASXL1 mutation is associated with poor prognosis and acute transformation in chronic myelomonocytic leukaemia.
Véronique Gelsi-Boyer, Virginie Trouplin, Julien Roquain, José Adélaïde, Nadine Carbuccia, Benjamin Esterni, Pascal Finetti, Anne Murati, Christine Arnoulet, Hacène Zerazhi,[...]. Br J Haematol 2010
167
10

Myelodysplastic syndromes are induced by histone methylation–altering ASXL1 mutations.
Daichi Inoue, Jiro Kitaura, Katsuhiro Togami, Koutarou Nishimura, Yutaka Enomoto, Tomoyuki Uchida, Yuki Kagiyama, Kimihito Cojin Kawabata, Fumio Nakahara, Kumi Izawa,[...]. J Clin Invest 2013
114
10

The Polycomb complex PRC2 and its mark in life.
Raphaël Margueron, Danny Reinberg. Nature 2011
10

Germline mutations in BAP1 predispose to melanocytic tumors.
Thomas Wiesner, Anna C Obenauf, Rajmohan Murali, Isabella Fried, Klaus G Griewank, Peter Ulz, Christian Windpassinger, Werner Wackernagel, Shea Loy, Ingrid Wolf,[...]. Nat Genet 2011
467
10

Resetting the epigenetic balance of Polycomb and COMPASS function at enhancers for cancer therapy.
Lu Wang, Zibo Zhao, Patrick A Ozark, Damiano Fantini, Stacy A Marshall, Emily J Rendleman, Kira A Cozzolino, Nundia Louis, Xingyao He, Marc A Morgan,[...]. Nat Med 2018
82
12

PRC1 Catalytic Activity Is Central to Polycomb System Function.
Neil P Blackledge, Nadezda A Fursova, Jessica R Kelley, Miles K Huseyin, Angelika Feldmann, Robert J Klose. Mol Cell 2020
95
10

Truncation mutants of ASXL1 observed in myeloid malignancies are expressed at detectable protein levels.
Daichi Inoue, Masaki Matsumoto, Reina Nagase, Makoto Saika, Takeshi Fujino, Keiichi I Nakayama, Toshio Kitamura. Exp Hematol 2016
36
25

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
9

Frequent mutation of the polycomb-associated gene ASXL1 in the myelodysplastic syndromes and in acute myeloid leukemia.
J Boultwood, J Perry, A Pellagatti, M Fernandez-Mercado, C Fernandez-Santamaria, M J Calasanz, M J Larrayoz, M Garcia-Delgado, A Giagounidis, L Malcovati,[...]. Leukemia 2010
195
9

Loss of Asxl1 leads to myelodysplastic syndrome-like disease in mice.
Jiapeng Wang, Zhaomin Li, Yongzheng He, Feng Pan, Shi Chen, Steven Rhodes, Lihn Nguyen, Jin Yuan, Li Jiang, Xianlin Yang,[...]. Blood 2014
113
9

De novo dominant ASXL3 mutations alter H2A deubiquitination and transcription in Bainbridge-Ropers syndrome.
Anshika Srivastava, K C Ritesh, Yao-Chang Tsan, Rosy Liao, Fengyun Su, Xuhong Cao, Mark C Hannibal, Catherine E Keegan, Arul M Chinnaiyan, Donna M Martin,[...]. Hum Mol Genet 2016
44
20

The Role of Additional Sex Combs-Like Proteins in Cancer.
Jean-Baptiste Micol, Omar Abdel-Wahab. Cold Spring Harb Perspect Med 2016
29
31

PR-DUB maintains the expression of critical genes through FOXK1/2- and ASXL1/2/3-dependent recruitment to chromatin and H2AK119ub1 deubiquitination.
Petros Kolovos, Koutarou Nishimura, Aditya Sankar, Simone Sidoli, Paul A Cloos, Kristian Helin, Jesper Christensen. Genome Res 2020
13
69


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.