A citation-based method for searching scientific literature

Sophie E Polo, Abderrahmane Kaidi, Linda Baskcomb, Yaron Galanty, Stephen P Jackson. EMBO J 2010
Times Cited: 238







List of co-cited articles
1181 articles co-cited >1



Times Cited
  Times     Co-cited
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A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage.
Danny M Chou, Britt Adamson, Noah E Dephoure, Xu Tan, Amanda C Nottke, Kristen E Hurov, Steven P Gygi, Monica P Colaiácovo, Stephen J Elledge. Proc Natl Acad Sci U S A 2010
381
43

The NuRD chromatin-remodeling complex regulates signaling and repair of DNA damage.
Godelieve Smeenk, Wouter W Wiegant, Hans Vrolijk, Aldo P Solari, Albert Pastink, Haico van Attikum. J Cell Biol 2010
173
42

The chromatin-remodeling factor CHD4 coordinates signaling and repair after DNA damage.
Dorthe Helena Larsen, Catherine Poinsignon, Thorkell Gudjonsson, Christoffel Dinant, Mark R Payne, Flurina J Hari, Jannie M Rendtlew Danielsen, Patrice Menard, Jette Christensen Sand, Manuel Stucki,[...]. J Cell Biol 2010
160
41

Poly(ADP-ribose)-dependent regulation of DNA repair by the chromatin remodeling enzyme ALC1.
Dragana Ahel, Zuzana Horejsí, Nicola Wiechens, Sophie E Polo, Elisa Garcia-Wilson, Ivan Ahel, Helen Flynn, Mark Skehel, Stephen C West, Stephen P Jackson,[...]. Science 2009
404
25

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
23



53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.
Amélie Fradet-Turcotte, Marella D Canny, Cristina Escribano-Díaz, Alexandre Orthwein, Charles C Y Leung, Hao Huang, Marie-Claude Landry, Julianne Kitevski-LeBlanc, Sylvie M Noordermeer, Frank Sicheri,[...]. Nature 2013
432
21

PARP1 Links CHD2-Mediated Chromatin Expansion and H3.3 Deposition to DNA Repair by Non-homologous End-Joining.
Martijn S Luijsterburg, Inge de Krijger, Wouter W Wiegant, Rashmi G Shah, Godelieve Smeenk, Anton J L de Groot, Alex Pines, Alfred C O Vertegaal, Jacqueline J L Jacobs, Girish M Shah,[...]. Mol Cell 2016
152
21

DNA double-strand breaks promote methylation of histone H3 on lysine 9 and transient formation of repressive chromatin.
Marina K Ayrapetov, Ozge Gursoy-Yuzugullu, Chang Xu, Ye Xu, Brendan D Price. Proc Natl Acad Sci U S A 2014
212
20

ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks.
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
481
20

Human HDAC1 and HDAC2 function in the DNA-damage response to promote DNA nonhomologous end-joining.
Kyle M Miller, Jorrit V Tjeertes, Julia Coates, Gaëlle Legube, Sophie E Polo, Sébastien Britton, Stephen P Jackson. Nat Struct Mol Biol 2010
426
19

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.
Fade Gong, Li-Ya Chiu, Ben Cox, François Aymard, Thomas Clouaire, Justin W Leung, Michael Cammarata, Mercedes Perez, Poonam Agarwal, Jennifer S Brodbelt,[...]. Genes Dev 2015
144
19

NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities.
Y Xue, J Wong, G T Moreno, M K Young, J Côté, W Wang. Mol Cell 1998
742
18

Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler.
Aaron J Gottschalk, Gyula Timinszky, Stephanie E Kong, Jingji Jin, Yong Cai, Selene K Swanson, Michael P Washburn, Laurence Florens, Andreas G Ladurner, Joan W Conaway,[...]. Proc Natl Acad Sci U S A 2009
261
17

Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination.
Jiangbo Tang, Nam Woo Cho, Gaofeng Cui, Erica M Manion, Niraj M Shanbhag, Maria Victoria Botuyan, Georges Mer, Roger A Greenberg. Nat Struct Mol Biol 2013
327
17

Requirement for PBAF in transcriptional repression and repair at DNA breaks in actively transcribed regions of chromatin.
Andreas Kakarougkas, Amani Ismail, Anna L Chambers, Enriqueta Riballo, Alex D Herbert, Julia Künzel, Markus Löbrich, Penny A Jeggo, Jessica A Downs. Mol Cell 2014
175
17

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
17

RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
401
16

Playing the end game: DNA double-strand break repair pathway choice.
J Ross Chapman, Martin R G Taylor, Simon J Boulton. Mol Cell 2012
994
16

Double-strand break repair: 53BP1 comes into focus.
Stephanie Panier, Simon J Boulton. Nat Rev Mol Cell Biol 2014
617
15

PARP1-dependent recruitment of KDM4D histone demethylase to DNA damage sites promotes double-strand break repair.
Hanan Khoury-Haddad, Noga Guttmann-Raviv, Inbal Ipenberg, David Huggins, Anand D Jeyasekharan, Nabieh Ayoub. Proc Natl Acad Sci U S A 2014
82
18

Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks.
François Aymard, Beatrix Bugler, Christine K Schmidt, Emmanuelle Guillou, Pierre Caron, Sébastien Briois, Jason S Iacovoni, Virginie Daburon, Kyle M Miller, Stephen P Jackson,[...]. Nat Struct Mol Biol 2014
365
15

Chromatin remodeling at DNA double-strand breaks.
Brendan D Price, Alan D D'Andrea. Cell 2013
355
15


Histone H3 methylation links DNA damage detection to activation of the tumour suppressor Tip60.
Yingli Sun, Xiaofeng Jiang, Ye Xu, Marina K Ayrapetov, Lisa A Moreau, Johnathan R Whetstine, Brendan D Price. Nat Cell Biol 2009
306
14

A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.
Martijn S Luijsterburg, Klara Acs, Leena Ackermann, Wouter W Wiegant, Simon Bekker-Jensen, Dorthe H Larsen, Kum Kum Khanna, Haico van Attikum, Niels Mailand, Nico P Dantuma. EMBO J 2012
81
17


ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage.
Cornelia G Spruijt, Martijn S Luijsterburg, Roberta Menafra, Rik G H Lindeboom, Pascal W T C Jansen, Raghu Ram Edupuganti, Marijke P Baltissen, Wouter W Wiegant, Moritz C Voelker-Albert, Filomena Matarese,[...]. Cell Rep 2016
61
22

RNF8 ubiquitylates histones at DNA double-strand breaks and promotes assembly of repair proteins.
Niels Mailand, Simon Bekker-Jensen, Helene Faustrup, Fredrik Melander, Jiri Bartek, Claudia Lukas, Jiri Lukas. Cell 2007
852
13

Regulation of DNA damage responses by ubiquitin and SUMO.
Stephen P Jackson, Daniel Durocher. Mol Cell 2013
423
13

MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.
Manuel Stucki, Julie A Clapperton, Duaa Mohammad, Michael B Yaffe, Stephen J Smerdon, Stephen P Jackson. Cell 2005
753
13

A Systematic Analysis of Factors Localized to Damaged Chromatin Reveals PARP-Dependent Recruitment of Transcription Factors.
Lior Izhar, Britt Adamson, Alberto Ciccia, Jedd Lewis, Laura Pontano-Vaites, Yumei Leng, Anthony C Liang, Thomas F Westbrook, J Wade Harper, Stephen J Elledge. Cell Rep 2015
96
13

Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair.
Maria Victoria Botuyan, Joseph Lee, Irene M Ward, Ja-Eun Kim, James R Thompson, Junjie Chen, Georges Mer. Cell 2006
705
13

Exome sequencing of serous endometrial tumors identifies recurrent somatic mutations in chromatin-remodeling and ubiquitin ligase complex genes.
Matthieu Le Gallo, Andrea J O'Hara, Meghan L Rudd, Mary Ellen Urick, Nancy F Hansen, Nigel J O'Neil, Jessica C Price, Suiyuan Zhang, Bryant M England, Andrew K Godwin,[...]. Nat Genet 2012
278
13

CHD4 in the DNA-damage response and cell cycle progression: not so NuRDy now.
Aoife O'Shaughnessy, Brian Hendrich. Biochem Soc Trans 2013
67
19

Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase.
Nadine K Kolas, J Ross Chapman, Shinichiro Nakada, Jarkko Ylanko, Richard Chahwan, Frédéric D Sweeney, Stephanie Panier, Megan Mendez, Jan Wildenhain, Timothy M Thomson,[...]. Science 2007
672
12

Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex.
J K Tong, C A Hassig, G R Schnitzler, R E Kingston, S L Schreiber. Nature 1998
529
12


The human Mi-2/NuRD complex and gene regulation.
S A Denslow, P A Wade. Oncogene 2007
335
12

KAP-1 phosphorylation regulates CHD3 nucleosome remodeling during the DNA double-strand break response.
Aaron A Goodarzi, Thomas Kurka, Penelope A Jeggo. Nat Struct Mol Biol 2011
171
12

Poly(ADP-ribosyl)ation links the chromatin remodeler SMARCA5/SNF2H to RNF168-dependent DNA damage signaling.
Godelieve Smeenk, Wouter W Wiegant, Jurgen A Marteijn, Martijn S Luijsterburg, Nicholas Sroczynski, Thomas Costelloe, Ron J Romeijn, Albert Pastink, Niels Mailand, Wim Vermeulen,[...]. J Cell Sci 2013
94
12


CHD4 Has Oncogenic Functions in Initiating and Maintaining Epigenetic Suppression of Multiple Tumor Suppressor Genes.
Limin Xia, Wenjie Huang, Marina Bellani, Michael M Seidman, Kaichun Wu, Daiming Fan, Yongzhan Nie, Yi Cai, Yang W Zhang, Li-Rong Yu,[...]. Cancer Cell 2017
75
16


Chromatin relaxation in response to DNA double-strand breaks is modulated by a novel ATM- and KAP-1 dependent pathway.
Yael Ziv, Dana Bielopolski, Yaron Galanty, Claudia Lukas, Yoichi Taya, David C Schultz, Jiri Lukas, Simon Bekker-Jensen, Jiri Bartek, Yosef Shiloh. Nat Cell Biol 2006
531
11

DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks.
Tibor Pankotai, Céline Bonhomme, David Chen, Evi Soutoglou. Nat Struct Mol Biol 2012
152
11

Polycomb repressive complex 2 contributes to DNA double-strand break repair.
Stuart Campbell, Ismail Hassan Ismail, Leah C Young, Guy G Poirier, Michael J Hendzel. Cell Cycle 2013
91
12

Depletion of the chromatin remodeler CHD4 sensitizes AML blasts to genotoxic agents and reduces tumor formation.
Justin Sperlazza, Mohamed Rahmani, Jason Beckta, Mandy Aust, Elisa Hawkins, Shou Zhen Wang, Sheng Zu Zhu, Shreya Podder, Catherine Dumur, Kellie Archer,[...]. Blood 2015
36
30

Acetyltransferase p300 collaborates with chromodomain helicase DNA-binding protein 4 (CHD4) to facilitate DNA double-strand break repair.
Wenjing Qi, Hongyu Chen, Ting Xiao, Ruoxi Wang, Ting Li, Liping Han, Xianlu Zeng. Mutagenesis 2016
26
42


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.