A citation-based method for searching scientific literature

Klaus Brettel, Martin Byrdin. Curr Opin Struct Biol 2010
Times Cited: 112







List of co-cited articles
953 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
29

Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA.
Stephan Kiontke, Yann Geisselbrecht, Richard Pokorny, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. EMBO J 2011
67
32


Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
319
20

Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
101
19

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
18

Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
139
18


Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
18

Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2013
72
23

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
111
16

Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
174
16

CryB from Rhodobacter sphaeroides: a unique class of cryptochromes with new cofactors.
Yann Geisselbrecht, Sebastian Frühwirth, Claudia Schroeder, Antonio J Pierik, Gabriele Klug, Lars-Oliver Essen. EMBO Rep 2012
66
24

Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
28

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
92
16

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
15

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
138
15

Quantum yield measurements of short-lived photoactivation intermediates in DNA photolyase: toward a detailed understanding of the triple tryptophan electron transfer chain.
Martin Byrdin, Andras Lukacs, Viruthachalam Thiagarajan, André P M Eker, Klaus Brettel, Marten H Vos. J Phys Chem A 2010
49
30

Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
14

Light-induced electron transfer in a cryptochrome blue-light photoreceptor.
Baldissera Giovani, Martin Byrdin, Margaret Ahmad, Klaus Brettel. Nat Struct Biol 2003
194
13

Searching for a photocycle of the cryptochrome photoreceptors.
Bin Liu, Hongtao Liu, Dongping Zhong, Chentao Lin. Curr Opin Plant Biol 2010
113
13


Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore.
Fan Zhang, Patrick Scheerer, Inga Oberpichler, Tilman Lamparter, Norbert Krauß. Proc Natl Acad Sci U S A 2013
63
20

Theoretical study on the repair mechanism of the (6-4) photolesion by the (6-4) photolyase.
Keyarash Sadeghian, Marco Bocola, Thomas Merz, Martin Schütz. J Am Chem Soc 2010
50
24


ATP binding turns plant cryptochrome into an efficient natural photoswitch.
Pavel Müller, Jean-Pierre Bouly, Kenichi Hitomi, Véronique Balland, Elizabeth D Getzoff, Thorsten Ritz, Klaus Brettel. Sci Rep 2014
72
16

The class III cyclobutane pyrimidine dimer photolyase structure reveals a new antenna chromophore binding site and alternative photoreduction pathways.
Patrick Scheerer, Fan Zhang, Jacqueline Kalms, David von Stetten, Norbert Krauß, Inga Oberpichler, Tilman Lamparter. J Biol Chem 2015
38
31

Electron transfer mechanisms of DNA repair by photolyase.
Dongping Zhong. Annu Rev Phys Chem 2015
58
20


A model for photoreceptor-based magnetoreception in birds.
T Ritz, S Adem, K Schulten. Biophys J 2000
582
11

Structural biology of DNA photolyases and cryptochromes.
Markus Müller, Thomas Carell. Curr Opin Struct Biol 2009
88
12

Spectro-temporal characterization of the photoactivation mechanism of two new oxidized cryptochrome/photolyase photoreceptors.
Johanna Brazard, Anwar Usman, Fabien Lacombat, Christian Ley, Monique M Martin, Pascal Plaza, Laetitia Mony, Marc Heijde, Gérald Zabulon, Chris Bowler. J Am Chem Soc 2010
53
20

Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
14

Ultrafast dynamics of flavins in five redox states.
Ya-Ting Kao, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
151
10

A novel photoreaction mechanism for the circadian blue light photoreceptor Drosophila cryptochrome.
Alex Berndt, Tilman Kottke, Helena Breitkreuz, Radovan Dvorsky, Sven Hennig, Michael Alexander, Eva Wolf. J Biol Chem 2007
146
10

Eukaryotic class II cyclobutane pyrimidine dimer photolyase structure reveals basis for improved ultraviolet tolerance in plants.
Kenichi Hitomi, Andrew S Arvai, Junpei Yamamoto, Chiharu Hitomi, Mika Teranishi, Tokuhisa Hirouchi, Kazuo Yamamoto, Shigenori Iwai, John A Tainer, Jun Hidema,[...]. J Biol Chem 2012
27
37

Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor.
Carrie L Partch, Michael W Clarkson, Sezgin Ozgür, Andrew L Lee, Aziz Sancar. Biochemistry 2005
140
10

Crystal structure of the T(6-4)C lesion in complex with a (6-4) DNA photolyase and repair of UV-induced (6-4) and Dewar photolesions.
Andreas F Glas, Sabine Schneider, Melanie J Maul, Ulrich Hennecke, Thomas Carell. Chemistry 2009
58
17

Structural and evolutionary aspects of antenna chromophore usage by class II photolyases.
Stephan Kiontke, Petra Gnau, Reinhard Haselsberger, Alfred Batschauer, Lars-Oliver Essen. J Biol Chem 2014
32
31

Repair of the (6-4) photoproduct by DNA photolyase requires two photons.
Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Pascal Plaza, Klaus Brettel. Angew Chem Int Ed Engl 2013
40
25

Dynamics and mechanisms of DNA repair by photolyase.
Zheyun Liu, Lijuan Wang, Dongping Zhong. Phys Chem Chem Phys 2015
46
21

Repair of (6-4) Lesions in DNA by (6-4) Photolyase: 20 Years of Quest for the Photoreaction Mechanism.
Junpei Yamamoto, Pascal Plaza, Klaus Brettel. Photochem Photobiol 2017
30
33


Intraprotein electron transfer and proton dynamics during photoactivation of DNA photolyase from E. coli: review and new insights from an "inverse" deuterium isotope effect.
Martin Byrdin, Valérie Sartor, André P M Eker, Marten H Vos, Corinne Aubert, Klaus Brettel, Paul Mathis. Biochim Biophys Acta 2004
68
13


Cryptochrome mediates light-dependent magnetosensitivity in Drosophila.
Robert J Gegear, Amy Casselman, Scott Waddell, Steven M Reppert. Nature 2008
248
9

Electron hopping through the 15 A triple tryptophan molecular wire in DNA photolyase occurs within 30 ps.
Andras Lukacs, André P M Eker, Martin Byrdin, Klaus Brettel, Marten H Vos. J Am Chem Soc 2008
86
10

Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
228
9

Role of two histidines in the (6-4) photolyase reaction.
K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
96
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.