A citation-based method for searching scientific literature

Wen-Yi Chen, Dileep K Pulukkunat, I-Ming Cho, Hsin-Yue Tsai, Venkat Gopalan. Nucleic Acids Res 2010
Times Cited: 37







List of co-cited articles
336 articles co-cited >1



Times Cited
  Times     Co-cited
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Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
193
78

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
72

Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
156
62


Ribosomal protein L7Ae is a subunit of archaeal RNase P.
I-Ming Cho, Lien B Lai, Dwi Susanti, Biswarup Mukhopadhyay, Venkat Gopalan. Proc Natl Acad Sci U S A 2010
55
59

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
56

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.
Lien B Lai, Agustín Vioque, Leif A Kirsebom, Venkat Gopalan. FEBS Lett 2010
99
56

Reconstitution of archaeal ribonuclease P from RNA and four protein components.
Yoshiaki Kouzuma, Masashi Mizoguchi, Hisanori Takagi, Hideo Fukuhara, Masayo Tsukamoto, Tomoyuki Numata, Makoto Kimura. Biochem Biophys Res Commun 2003
70
54

A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3.
Hideo Fukuhara, Mayumi Kifusa, Mitsutoshi Watanabe, Atsushi Terada, Takashi Honda, Tomoyuki Numata, Yoshimitsu Kakuta, Makoto Kimura. Biochem Biophys Res Commun 2006
50
51

Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
126
51

Archaeal/eukaryal RNase P: subunits, functions and RNA diversification.
Nayef Jarrous, Venkat Gopalan. Nucleic Acids Res 2010
83
51

RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
179
48

RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
151
45


Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
40



Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
139
37



RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
380
32

RNase P RNA-mediated cleavage.
Leif A Kirsebom, Stefan Trobro. IUBMB Life 2009
39
32

Cleavage of model substrates by archaeal RNase P: role of protein cofactors in cleavage-site selection.
Sylvie Sinapah, Shiying Wu, Yu Chen, B M Fredrik Pettersson, Venkat Gopalan, Leif A Kirsebom. Nucleic Acids Res 2011
18
66

New insight into RNase P RNA structure from comparative analysis of the archaeal RNA.
J K Harris, E S Haas, D Williams, D N Frank, J W Brown. RNA 2001
79
29


A single Arabidopsis organellar protein has RNase P activity.
Anthony Gobert, Bernard Gutmann, Andreas Taschner, Markus Gössringer, Johann Holzmann, Roland K Hartmann, Walter Rossmanith, Philippe Giegé. Nat Struct Mol Biol 2010
145
29

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Magnus Alm Rosenblad, Marcela Dávila López, Paul Piccinelli, Tore Samuelsson. Nucleic Acids Res 2006
55
27

Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P.
William P Boomershine, Craig A McElroy, Hsin-Yue Tsai, Ross C Wilson, Venkat Gopalan, Mark P Foster. Proc Natl Acad Sci U S A 2003
39
27

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
156
27

Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: an archaeal homologue of human nuclear ribonuclease P protein Rpp21.
Yoshimitsu Kakuta, Ikuko Ishimatsu, Tomoyuki Numata, Kazumi Kimura, Min Yao, Isao Tanaka, Makoto Kimura. Biochemistry 2005
31
32

Uniformity amid diversity in RNase P.
Venkat Gopalan. Proc Natl Acad Sci U S A 2007
26
38

Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.
Anna Perederina, Olga Esakova, Chao Quan, Elena Khanova, Andrey S Krasilnikov. EMBO J 2010
42
27

Structure of Pfu Pop5, an archaeal RNase P protein.
Ross C Wilson, Christopher J Bohlen, Mark P Foster, Charles E Bell. Proc Natl Acad Sci U S A 2006
40
27

A view of RNase P.
Sidney Altman. Mol Biosyst 2007
64
27



Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P.
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
64
24

Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
30

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
24

Archaeal homologs of human RNase P protein pairs Pop5 with Rpp30 and Rpp21 with Rpp29 work on distinct functional domains of the RNA subunit.
Takashi Honda, Tadashi Hara, Jinghua Nan, Xjaodong Zhang, Makoto Kimura. Biosci Biotechnol Biochem 2010
17
52

Discovery of a minimal form of RNase P in Pyrobaculum.
Lien B Lai, Patricia P Chan, Aaron E Cozen, David L Bernick, James W Brown, Venkat Gopalan, Todd M Lowe. Proc Natl Acad Sci U S A 2010
34
26

The enigma of ribonuclease P evolution.
Enno Hartmann, Roland K Hartmann. Trends Genet 2003
104
21




Substrate recognition by ribonucleoprotein ribonuclease MRP.
Olga Esakova, Anna Perederina, Chao Quan, Igor Berezin, Andrey S Krasilnikov. RNA 2011
19
36


Modular architecture of eukaryotic RNase P and RNase MRP revealed by electron microscopy.
Katharina Hipp, Kyriaki Galani, Claire Batisse, Simone Prinz, Bettina Böttcher. Nucleic Acids Res 2012
20
35

Distribution of Ribonucleoprotein and Protein-Only RNase P in Eukarya.
Marcus Lechner, Walter Rossmanith, Roland K Hartmann, Clemens Thölken, Bernard Gutmann, Philippe Giegé, Anthony Gobert. Mol Biol Evol 2015
47
18

The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.
Stella M Lai, Lien B Lai, Mark P Foster, Venkat Gopalan. Nucleic Acids Res 2014
12
58


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.