A citation-based method for searching scientific literature

Sylvie Sinapah, Shiying Wu, Yu Chen, B M Fredrik Pettersson, Venkat Gopalan, Leif A Kirsebom. Nucleic Acids Res 2011
Times Cited: 18







List of co-cited articles
251 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
196
94

Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
126
83

Ribosomal protein L7Ae is a subunit of archaeal RNase P.
I-Ming Cho, Lien B Lai, Dwi Susanti, Biswarup Mukhopadhyay, Venkat Gopalan. Proc Natl Acad Sci U S A 2010
55
77

RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
179
77

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
77

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.
Lien B Lai, Agustín Vioque, Leif A Kirsebom, Venkat Gopalan. FEBS Lett 2010
99
72

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
66


Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex.
Wen-Yi Chen, Dileep K Pulukkunat, I-Ming Cho, Hsin-Yue Tsai, Venkat Gopalan. Nucleic Acids Res 2010
37
66

Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
61


Discovery of a minimal form of RNase P in Pyrobaculum.
Lien B Lai, Patricia P Chan, Aaron E Cozen, David L Bernick, James W Brown, Venkat Gopalan, Todd M Lowe. Proc Natl Acad Sci U S A 2010
34
55

RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
384
55


A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3.
Hideo Fukuhara, Mayumi Kifusa, Mitsutoshi Watanabe, Atsushi Terada, Takashi Honda, Tomoyuki Numata, Yoshimitsu Kakuta, Makoto Kimura. Biochem Biophys Res Commun 2006
50
50

Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
50

RNase P RNA-mediated cleavage.
Leif A Kirsebom, Stefan Trobro. IUBMB Life 2009
40
50

A single Arabidopsis organellar protein has RNase P activity.
Anthony Gobert, Bernard Gutmann, Andreas Taschner, Markus Gössringer, Johann Holzmann, Roland K Hartmann, Walter Rossmanith, Philippe Giegé. Nat Struct Mol Biol 2010
146
50

Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
159
50

RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
151
44


Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P.
William P Boomershine, Craig A McElroy, Hsin-Yue Tsai, Ross C Wilson, Venkat Gopalan, Mark P Foster. Proc Natl Acad Sci U S A 2003
39
38

Reconstitution of archaeal ribonuclease P from RNA and four protein components.
Yoshiaki Kouzuma, Masashi Mizoguchi, Hisanori Takagi, Hideo Fukuhara, Masayo Tsukamoto, Tomoyuki Numata, Makoto Kimura. Biochem Biophys Res Commun 2003
70
38

Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P.
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
65
38

New insight into RNase P RNA structure from comparative analysis of the archaeal RNA.
J K Harris, E S Haas, D Williams, D N Frank, J W Brown. RNA 2001
79
38




Functional coupling between a distal interaction and the cleavage site in bacterial RNase-P-RNA-mediated cleavage.
Shiying Wu, Yu Chen, Magnus Lindell, Guanzhong Mao, Leif A Kirsebom. J Mol Biol 2011
12
58

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
141
38

Archaeal/eukaryal RNase P: subunits, functions and RNA diversification.
Nayef Jarrous, Venkat Gopalan. Nucleic Acids Res 2010
84
33

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
156
33

Structure of Pfu Pop5, an archaeal RNase P protein.
Ross C Wilson, Christopher J Bohlen, Mark P Foster, Charles E Bell. Proc Natl Acad Sci U S A 2006
40
33



Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P.
Nathan H Zahler, Eric L Christian, Michael E Harris. RNA 2003
66
33




Protein-precursor tRNA contact leads to sequence-specific recognition of 5' leaders by bacterial ribonuclease P.
Kristin S Koutmou, Nathan H Zahler, Jeffrey C Kurz, Frank E Campbell, Michael E Harris, Carol A Fierke. J Mol Biol 2010
32
27



The Ribonuclease P Database.
J W Brown. Nucleic Acids Res 1999
238
27

Hammerhead ribozyme kinetics.
T K Stage-Zimmermann, O C Uhlenbeck. RNA 1998
160
27

The exocyclic amine at the RNase P cleavage site contributes to substrate binding and catalysis.
Ema Kikovska, Mathias Brännvall, Leif A Kirsebom. J Mol Biol 2006
20
27

Evolutionary variation in bacterial RNase P RNAs.
E S Haas, J W Brown. Nucleic Acids Res 1998
80
27


Reconstitution of enzymatic activity from fragments of M1 RNA.
C Guerrier-Takada, S Altman. Proc Natl Acad Sci U S A 1992
54
27

The catalytic core of RNase P.
C J Green, R Rivera-León, B S Vold. Nucleic Acids Res 1996
25
27

Cooperative RNP assembly: complementary rescue of structural defects by protein and RNA subunits of archaeal RNase P.
Wen-Yi Chen, Yiren Xu, I-Ming Cho, Sri Vidya Oruganti, Mark P Foster, Venkat Gopalan. J Mol Biol 2011
10
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.