A citation-based method for searching scientific literature

Luca Fontanesi, Pier Luigi Martelli, Francesca Beretti, Valentina Riggio, Stefania Dall'Olio, Michela Colombo, Rita Casadio, Vincenzo Russo, Baldassare Portolano. BMC Genomics 2010
Times Cited: 88







List of co-cited articles
701 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Analysis of copy number variations among diverse cattle breeds.
George E Liu, Yali Hou, Bin Zhu, Maria Francesca Cardone, Lu Jiang, Angelo Cellamare, Apratim Mitra, Leeson J Alexander, Luiz L Coutinho, Maria Elena Dell'Aquila,[...]. Genome Res 2010
193
56

Global variation in copy number in the human genome.
Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, T Daniel Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen,[...]. Nature 2006
55

A first comparative map of copy number variations in the sheep genome.
L Fontanesi, F Beretti, P L Martelli, M Colombo, S Dall'olio, M Occidente, B Portolano, R Casadio, D Matassino, V Russo. Genomics 2011
71
57

Origins and functional impact of copy number variation in the human genome.
Donald F Conrad, Dalila Pinto, Richard Redon, Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T Daniel Andrews, Chris Barnes, Peter Campbell,[...]. Nature 2010
45

Copy number variation in the bovine genome.
João Fadista, Bo Thomsen, Lars-Erik Holm, Christian Bendixen. BMC Genomics 2010
116
42

Genomic characteristics of cattle copy number variations.
Yali Hou, George E Liu, Derek M Bickhart, Maria Francesca Cardone, Kai Wang, Eui-Soo Kim, Lakshmi K Matukumalli, Mario Ventura, Jiuzhou Song, Paul M VanRaden,[...]. BMC Genomics 2011
145
42

A snapshot of CNVs in the pig genome.
João Fadista, Marianne Nygaard, Lars-Erik Holm, Bo Thomsen, Christian Bendixen. PLoS One 2008
90
39

Copy number variation of individual cattle genomes using next-generation sequencing.
Derek M Bickhart, Yali Hou, Steven G Schroeder, Can Alkan, Maria Francesca Cardone, Lakshmi K Matukumalli, Jiuzhou Song, Robert D Schnabel, Mario Ventura, Jeremy F Taylor,[...]. Genome Res 2012
184
39

Structural variation in the human genome.
Lars Feuk, Andrew R Carson, Stephen W Scherer. Nat Rev Genet 2006
36

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
719
35

PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data.
Kai Wang, Mingyao Li, Dexter Hadley, Rui Liu, Joseph Glessner, Struan F A Grant, Hakon Hakonarson, Maja Bucan. Genome Res 2007
35

A high-resolution map of segmental DNA copy number variation in the mouse genome.
Timothy A Graubert, Patrick Cahan, Deepa Edwin, Rebecca R Selzer, Todd A Richmond, Peggy S Eis, William D Shannon, Xia Li, Howard L McLeod, James M Cheverud,[...]. PLoS Genet 2007
176
32

Identification of copy number variations and common deletion polymorphisms in cattle.
Joon Seol Bae, Hyun Sub Cheong, Lyoung Hyo Kim, Suk NamGung, Tae Joon Park, Ji-Yong Chun, Jason Yongha Kim, Charisse Flerida A Pasaje, Jin Sol Lee, Hyoung Doo Shin. BMC Genomics 2010
101
32

An initial map of chromosomal segmental copy number variations in the chicken.
Xiaofei Wang, Samuel Nahashon, Tromondae K Feaster, Ann Bohannon-Stewart, Nathaniel Adefope. BMC Genomics 2010
73
39

Copy number variation in the porcine genome inferred from a 60 k SNP BeadChip.
Yuliaxis Ramayo-Caldas, Anna Castelló, Romi N Pena, Estefania Alves, Anna Mercadé, Carla A Souza, Ana I Fernández, Miguel Perez-Enciso, Josep M Folch. BMC Genomics 2010
82
34

Mapping copy number variation by population-scale genome sequencing.
Ryan E Mills, Klaudia Walter, Chip Stewart, Robert E Handsaker, Ken Chen, Can Alkan, Alexej Abyzov, Seungtai Chris Yoon, Kai Ye, R Keira Cheetham,[...]. Nature 2011
732
31

Copy number variation and missense mutations of the agouti signaling protein (ASIP) gene in goat breeds with different coat colors.
L Fontanesi, F Beretti, V Riggio, E Gómez González, S Dall'Olio, R Davoli, V Russo, B Portolano. Cytogenet Genome Res 2009
87
28

Detection of large-scale variation in the human genome.
A John Iafrate, Lars Feuk, Miguel N Rivera, Marc L Listewnik, Patricia K Donahoe, Ying Qi, Stephen W Scherer, Charles Lee. Nat Genet 2004
26

Analysis of copy number variations in the sheep genome using 50K SNP BeadChip array.
Jiasen Liu, Li Zhang, Lingyang Xu, Hangxing Ren, Jian Lu, Xiaoning Zhang, Shifang Zhang, Xinlei Zhou, Caihong Wei, Fuping Zhao,[...]. BMC Genomics 2013
60
38


The genomic architecture of segmental duplications and associated copy number variants in dogs.
Thomas J Nicholas, Ze Cheng, Mario Ventura, Katrina Mealey, Evan E Eichler, Joshua M Akey. Genome Res 2009
117
25

Large-scale copy number polymorphism in the human genome.
Jonathan Sebat, B Lakshmi, Jennifer Troge, Joan Alexander, Janet Young, Pär Lundin, Susanne Månér, Hillary Massa, Megan Walker, Maoyen Chi,[...]. Science 2004
25

Mapping DNA structural variation in dogs.
Wei-Kang Chen, Joshua D Swartz, Laura J Rush, Carlos E Alvarez. Genome Res 2009
102
23

A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits.
Congying Chen, Ruimin Qiao, Rongxing Wei, Yuanmei Guo, Huashui Ai, Junwu Ma, Jun Ren, Lusheng Huang. BMC Genomics 2012
67
29

Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens.
Dominic Wright, Henrik Boije, Jennifer R S Meadows, Bertrand Bed'hom, David Gourichon, Agathe Vieaud, Michèle Tixier-Boichard, Carl-Johan Rubin, Freyja Imsland, Finn Hallböök,[...]. PLoS Genet 2009
143
21

Distribution and functional impact of DNA copy number variation in the rat.
Victor Guryev, Kathrin Saar, Tatjana Adamovic, Mark Verheul, Sebastiaan A A C van Heesch, Stuart Cook, Michal Pravenec, Timothy Aitman, Howard Jacob, James D Shull,[...]. Nat Genet 2008
154
21

Analysis of copy loss and gain variations in Holstein cattle autosomes using BeadChip SNPs.
Eyal Seroussi, Giora Glick, Andrey Shirak, Emanuel Yakobson, Joel I Weller, Ephraim Ezra, Yoel Zeron. BMC Genomics 2010
55
34

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array.
Yali Hou, Derek M Bickhart, Miranda L Hvinden, Congjun Li, Jiuzhou Song, Didier A Boichard, Sébastien Fritz, André Eggen, Sue DeNise, George R Wiggans,[...]. BMC Genomics 2012
61
31

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery.
Paul Stothard, Jung-Woo Choi, Urmila Basu, Jennifer M Sumner-Thomson, Yan Meng, Xiaoping Liao, Stephen S Moore. BMC Genomics 2011
104
20

A genome-wide detection of copy number variations using SNP genotyping arrays in swine.
Jiying Wang, Jicai Jiang, Weixuan Fu, Li Jiang, Xiangdong Ding, Jian-Feng Liu, Qin Zhang. BMC Genomics 2012
71
25

Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants.
Dalila Pinto, Katayoon Darvishi, Xinghua Shi, Diana Rajan, Diane Rigler, Tom Fitzgerald, Anath C Lionel, Bhooma Thiruvahindrapuram, Jeffrey R Macdonald, Ryan Mills,[...]. Nat Biotechnol 2011
302
19

Mouse segmental duplication and copy number variation.
Xinwei She, Ze Cheng, Sebastian Zöllner, Deanna M Church, Evan E Eichler. Nat Genet 2008
167
18

QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data.
Stefano Colella, Christopher Yau, Jennifer M Taylor, Ghazala Mirza, Helen Butler, Penny Clouston, Anne S Bassett, Anneke Seller, Christopher C Holmes, Jiannis Ragoussis. Nucleic Acids Res 2007
418
18

Genome structural variation discovery and genotyping.
Can Alkan, Bradley P Coe, Evan E Eichler. Nat Rev Genet 2011
788
18


Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
18

Detection of germline and somatic copy number variations in cattle.
G E Liu, C P Van Tassell, T S Sonstegard, R W Li, L J Alexander, J W Keele, L K Matukumalli, T P Smith, L C Gasbarre. Dev Biol (Basel) 2008
35
42

Relative impact of nucleotide and copy number variation on gene expression phenotypes.
Barbara E Stranger, Matthew S Forrest, Mark Dunning, Catherine E Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P Bird, Anna de Grassi, Charles Lee,[...]. Science 2007
17

Copy number variation: new insights in genome diversity.
Jennifer L Freeman, George H Perry, Lars Feuk, Richard Redon, Steven A McCarroll, David M Altshuler, Hiroyuki Aburatani, Keith W Jones, Chris Tyler-Smith, Matthew E Hurles,[...]. Genome Res 2006
506
17

Copy number variation, chromosome rearrangement, and their association with recombination during avian evolution.
Martin Völker, Niclas Backström, Benjamin M Skinner, Elizabeth J Langley, Sydney K Bunzey, Hans Ellegren, Darren K Griffin. Genome Res 2010
100
17

Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution.
Darren K Griffin, Lindsay B Robertson, Helen G Tempest, Alain Vignal, Valérie Fillon, Richard P M A Crooijmans, Martien A M Groenen, Svetlana Deryusheva, Elena Gaginskaya, Wilfrid Carré,[...]. BMC Genomics 2008
100
17

Analysis of recent segmental duplications in the bovine genome.
George E Liu, Mario Ventura, Angelo Cellamare, Lin Chen, Ze Cheng, Bin Zhu, Congjun Li, Jiuzhou Song, Evan E Eichler. BMC Genomics 2009
66
22

Copy number variation in the domestic dog.
Carlos E Alvarez, Joshua M Akey. Mamm Genome 2012
39
38

Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle.
Yali Hou, George E Liu, Derek M Bickhart, Lakshmi K Matukumalli, Congjun Li, Jiuzhou Song, Louis C Gasbarre, Curtis P Van Tassell, Tad S Sonstegard. Funct Integr Genomics 2012
67
22

Copy number variation in the genomes of domestic animals.
A Clop, O Vidal, M Amills. Anim Genet 2012
81
18

Genome-wide identification of copy number variations in Chinese Holstein.
Li Jiang, Jicai Jiang, Jiying Wang, Xiangdong Ding, Jianfeng Liu, Qin Zhang. PLoS One 2012
40
37


Large scale variation in DNA copy number in chicken breeds.
Richard P M A Crooijmans, Mark S Fife, Tomas W Fitzgerald, Shurnevia Strickland, Hans H Cheng, Pete Kaiser, Richard Redon, Martien A M Groenen. BMC Genomics 2013
38
36

Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication.
Yogesh Paudel, Ole Madsen, Hendrik-Jan Megens, Laurent A F Frantz, Mirte Bosse, John W M Bastiaansen, Richard P M A Crooijmans, Martien A M Groenen. BMC Genomics 2013
85
16

A copy number variation map of the human genome.
Mehdi Zarrei, Jeffrey R MacDonald, Daniele Merico, Stephen W Scherer. Nat Rev Genet 2015
413
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.