A citation-based method for searching scientific literature

Olga Esakova, Anna Perederina, Chao Quan, Igor Berezin, Andrey S Krasilnikov. RNA 2011
Times Cited: 19







List of co-cited articles
254 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
175
68

Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
147
68


RNase MRP cleaves the CLB2 mRNA to promote cell cycle progression: novel method of mRNA degradation.
Tina Gill, Ti Cai, Jason Aulds, Sara Wierzbicki, Mark E Schmitt. Mol Cell Biol 2004
115
57


Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.
Anna Perederina, Olga Esakova, Chao Quan, Elena Khanova, Andrey S Krasilnikov. EMBO J 2010
40
52

The RNA of RNase MRP is required for normal processing of ribosomal RNA.
S Chu, R H Archer, J M Zengel, L Lindahl. Proc Natl Acad Sci U S A 1994
183
52


Footprinting analysis demonstrates extensive similarity between eukaryotic RNase P and RNase MRP holoenzymes.
Olga Esakova, Anna Perederina, Chao Quan, Mark E Schmitt, Andrey S Krasilnikov. RNA 2008
25
47

Archaeal/eukaryal RNase P: subunits, functions and RNA diversification.
Nayef Jarrous, Venkat Gopalan. Nucleic Acids Res 2010
79
47


Mutations in the RNA component of RNase MRP cause a pleiotropic human disease, cartilage-hair hypoplasia.
M Ridanpää, H van Eenennaam, K Pelin, R Chadwick, C Johnson, B Yuan, W vanVenrooij, G Pruijn, R Salmela, S Rockas,[...]. Cell 2001
297
47

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
42


Basis for structural diversity in homologous RNAs.
Andrey S Krasilnikov, Yinghua Xiao, Tao Pan, Alfonso Mondragón. Science 2004
101
42

RNase MRP is required for entry of 35S precursor rRNA into the canonical processing pathway.
Lasse Lindahl, Ananth Bommankanti, Xing Li, Lauren Hayden, Adrienne Jones, Miriam Khan, Tolulope Oni, Janice M Zengel. RNA 2009
35
42

Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes.
Paul Piccinelli, Magnus Alm Rosenblad, Tore Samuelsson. Nucleic Acids Res 2005
89
42


Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex.
Wen-Yi Chen, Dileep K Pulukkunat, I-Ming Cho, Hsin-Yue Tsai, Venkat Gopalan. Nucleic Acids Res 2010
34
36

The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins.
Z Lygerou, P Mitchell, E Petfalski, B Séraphin, D Tollervey. Genes Dev 1994
191
36

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
153
36

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
67
36

Conserved and variable domains of RNase MRP RNA.
Marcela Dávila López, Magnus Alm Rosenblad, Tore Samuelsson. RNA Biol 2009
36
36


Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Magnus Alm Rosenblad, Marcela Dávila López, Paul Piccinelli, Tore Samuelsson. Nucleic Acids Res 2006
52
36

Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
155
36

Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP).
Jason Aulds, Sara Wierzbicki, Adrian McNairn, Mark E Schmitt. J Biol Chem 2012
8
87

Modular architecture of eukaryotic RNase P and RNase MRP revealed by electron microscopy.
Katharina Hipp, Kyriaki Galani, Claire Batisse, Simone Prinz, Bettina Böttcher. Nucleic Acids Res 2012
20
36


Identification of a functional core in the RNA component of RNase MRP of budding yeasts.
Xing Li, Sephorah Zaman, Yvette Langdon, Janice M Zengel, Lasse Lindahl. Nucleic Acids Res 2004
26
31


Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
120
31


Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP.
Anna Perederina, Elena Khanova, Chao Quan, Igor Berezin, Olga Esakova, Andrey S Krasilnikov. RNA 2011
8
75

Structural organizations of yeast RNase P and RNase MRP holoenzymes as revealed by UV-crosslinking studies of RNA-protein interactions.
Elena Khanova, Olga Esakova, Anna Perederina, Igor Berezin, Andrey S Krasilnikov. RNA 2012
18
33

Functional characterization of the conserved amino acids in Pop1p, the largest common protein subunit of yeast RNases P and MRP.
Shaohua Xiao, John Hsieh, Rebecca L Nugent, Daniel J Coughlin, Carol A Fierke, David R Engelke. RNA 2006
15
33

Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs.
Daniel J Coughlin, Jeffrey A Pleiss, Scott C Walker, Gregg B Whitworth, David R Engelke. Proc Natl Acad Sci U S A 2008
42
26

Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
135
26

Binding and cleavage of unstructured RNA by nuclear RNase P.
Michael C Marvin, Scott C Walker, Carol A Fierke, David R Engelke. RNA 2011
12
41

RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
144
26

Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae.
Michael C Marvin, Sandra Clauder-Münster, Scott C Walker, Ali Sarkeshik, John R Yates, Lars M Steinmetz, David R Engelke. RNA 2011
25
26

Severely incapacitating mutations in patients with extreme short stature identify RNA-processing endoribonuclease RMRP as an essential cell growth regulator.
Christian T Thiel, Denise Horn, Bernhard Zabel, Arif B Ekici, Kelly Salinas, Erich Gebhart, Franz Rüschendorf, Heinrich Sticht, Jürgen Spranger, Dietmar Müller,[...]. Am J Hum Genet 2005
90
26

Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex.
Tim J M Welting, Walther J van Venrooij, Ger J M Pruijn. Nucleic Acids Res 2004
71
26

Crystal structure of the specificity domain of ribonuclease P.
Andrey S Krasilnikov, Xiaojing Yang, Tao Pan, Alfonso Mondragón. Nature 2003
170
26



Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs.
Anna Perederina, Olga Esakova, Hasan Koc, Mark E Schmitt, Andrey S Krasilnikov. RNA 2007
36
26

RNA-protein interactions in the human RNase MRP ribonucleoprotein complex.
H Pluk, H van Eenennaam, S A Rutjes, G J Pruijn, W J van Venrooij. RNA 1999
54
26



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.