A citation-based method for searching scientific literature

David Yu Zhang, Georg Seelig. Nat Chem 2011
Times Cited: 802







List of co-cited articles
902 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Control of DNA strand displacement kinetics using toehold exchange.
David Yu Zhang, Erik Winfree. J Am Chem Soc 2009
622
30

A DNA-fuelled molecular machine made of DNA.
B Yurke, A J Turberfield, A P Mills, F C Simmel, J L Neumann. Nature 2000
27


Principles and Applications of Nucleic Acid Strand Displacement Reactions.
Friedrich C Simmel, Bernard Yurke, Hari R Singh. Chem Rev 2019
121
22


Enzyme-free nucleic acid logic circuits.
Georg Seelig, David Soloveichik, David Yu Zhang, Erik Winfree. Science 2006
696
20

Engineering entropy-driven reactions and networks catalyzed by DNA.
David Yu Zhang, Andrew J Turberfield, Bernard Yurke, Erik Winfree. Science 2007
530
20

Triggered amplification by hybridization chain reaction.
Robert M Dirks, Niles A Pierce. Proc Natl Acad Sci U S A 2004
886
17

Programming biomolecular self-assembly pathways.
Peng Yin, Harry M T Choi, Colby R Calvert, Niles A Pierce. Nature 2008
767
17

A logic-gated nanorobot for targeted transport of molecular payloads.
Shawn M Douglas, Ido Bachelet, George M Church. Science 2012
17

On the biophysics and kinetics of toehold-mediated DNA strand displacement.
Niranjan Srinivas, Thomas E Ouldridge, Petr Sulc, Joseph M Schaeffer, Bernard Yurke, Ard A Louis, Jonathan P K Doye, Erik Winfree. Nucleic Acids Res 2013
210
16

NUPACK: Analysis and design of nucleic acid systems.
Joseph N Zadeh, Conrad D Steenberg, Justin S Bois, Brian R Wolfe, Marshall B Pierce, Asif R Khan, Robert M Dirks, Niles A Pierce. J Comput Chem 2011
658
16


A cargo-sorting DNA robot.
Anupama J Thubagere, Wei Li, Robert F Johnson, Zibo Chen, Shayan Doroudi, Yae Lim Lee, Gregory Izatt, Sarah Wittman, Niranjan Srinivas, Damien Woods,[...]. Science 2017
179
13

Neural network computation with DNA strand displacement cascades.
Lulu Qian, Erik Winfree, Jehoshua Bruck. Nature 2011
389
13

Nucleic acid junctions and lattices.
N C Seeman. J Theor Biol 1982
13


A synthetic DNA walker for molecular transport.
Jong-Shik Shin, Niles A Pierce. J Am Chem Soc 2004
399
11

Remote toehold: a mechanism for flexible control of DNA hybridization kinetics.
Anthony J Genot, David Yu Zhang, Jonathan Bath, Andrew J Turberfield. J Am Chem Soc 2011
144
10

Rational, modular adaptation of enzyme-free DNA circuits to multiple detection methods.
Bingling Li, Andrew D Ellington, Xi Chen. Nucleic Acids Res 2011
285
10

DNA nanotechnology from the test tube to the cell.
Yuan-Jyue Chen, Benjamin Groves, Richard A Muscat, Georg Seelig. Nat Nanotechnol 2015
277
10

A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo.
Suping Li, Qiao Jiang, Shaoli Liu, Yinlong Zhang, Yanhua Tian, Chen Song, Jing Wang, Yiguo Zou, Gregory J Anderson, Jing-Yan Han,[...]. Nat Biotechnol 2018
426
10

DNA nanomachines.
Jonathan Bath, Andrew J Turberfield. Nat Nanotechnol 2007
587
10

Enzyme-free nucleic acid dynamical systems.
Niranjan Srinivas, James Parkin, Georg Seelig, Erik Winfree, David Soloveichik. Science 2017
90
11


Self-assembly of a nanoscale DNA box with a controllable lid.
Ebbe S Andersen, Mingdong Dong, Morten M Nielsen, Kasper Jahn, Ramesh Subramani, Wael Mamdouh, Monika M Golas, Bjoern Sander, Holger Stark, Cristiano L P Oliveira,[...]. Nature 2009
833
10

DNA Origami: Scaffolds for Creating Higher Order Structures.
Fan Hong, Fei Zhang, Yan Liu, Hao Yan. Chem Rev 2017
367
9

Diagnostic applications of nucleic acid circuits.
Cheulhee Jung, Andrew D Ellington. Acc Chem Res 2014
167
9

Optimizing the specificity of nucleic acid hybridization.
David Yu Zhang, Sherry Xi Chen, Peng Yin. Nat Chem 2012
212
9

Molecular robots guided by prescriptive landscapes.
Kyle Lund, Anthony J Manzo, Nadine Dabby, Nicole Michelotti, Alexander Johnson-Buck, Jeanette Nangreave, Steven Taylor, Renjun Pei, Milan N Stojanovic, Nils G Walter,[...]. Nature 2010
467
9

Dynamic DNA devices and assemblies formed by shape-complementary, non-base pairing 3D components.
Thomas Gerling, Klaus F Wagenbauer, Andrea M Neuner, Hendrik Dietz. Science 2015
278
9

DNA in a material world.
Nadrian C Seeman. Nature 2003
9

Self-assembly of DNA into nanoscale three-dimensional shapes.
Shawn M Douglas, Hendrik Dietz, Tim Liedl, Björn Högberg, Franziska Graf, William M Shih. Nature 2009
8

Design and self-assembly of two-dimensional DNA crystals.
E Winfree, F Liu, L A Wenzler, N C Seeman. Nature 1998
8

Computing in mammalian cells with nucleic acid strand exchange.
Benjamin Groves, Yuan-Jyue Chen, Chiara Zurla, Sergii Pochekailov, Jonathan L Kirschman, Philip J Santangelo, Georg Seelig. Nat Nanotechnol 2016
108
8

Triplex DNA Nanostructures: From Basic Properties to Applications.
Yuwei Hu, Alessandro Cecconello, Andrea Idili, Francesco Ricci, Itamar Willner. Angew Chem Int Ed Engl 2017
115
8

Rapid prototyping of 3D DNA-origami shapes with caDNAno.
Shawn M Douglas, Adam H Marblestone, Surat Teerapittayanon, Alejandro Vazquez, George M Church, William M Shih. Nucleic Acids Res 2009
515
8

Rolling circle amplification: a versatile tool for chemical biology, materials science and medicine.
M Monsur Ali, Feng Li, Zhiqing Zhang, Kaixiang Zhang, Dong-Ku Kang, James A Ankrum, X Chris Le, Weian Zhao. Chem Soc Rev 2014
405
7

Complex shapes self-assembled from single-stranded DNA tiles.
Bryan Wei, Mingjie Dai, Peng Yin. Nature 2012
476
7

Complex cellular logic computation using ribocomputing devices.
Alexander A Green, Jongmin Kim, Duo Ma, Pamela A Silver, James J Collins, Peng Yin. Nature 2017
138
7

Isothermal Amplification of Nucleic Acids.
Yongxi Zhao, Feng Chen, Qian Li, Lihua Wang, Chunhai Fan. Chem Rev 2015
584
7

DNA sequence-directed shape change of photopatterned hydrogels via high-degree swelling.
Angelo Cangialosi, ChangKyu Yoon, Jiayu Liu, Qi Huang, Jingkai Guo, Thao D Nguyen, David H Gracias, Rebecca Schulman. Science 2017
116
7

A proximity-based programmable DNA nanoscale assembly line.
Hongzhou Gu, Jie Chao, Shou-Jun Xiao, Nadrian C Seeman. Nature 2010
432
7

Autonomous dynamic control of DNA nanostructure self-assembly.
Leopold N Green, Hari K K Subramanian, Vahid Mardanlou, Jongmin Kim, Rizal F Hariadi, Elisa Franco. Nat Chem 2019
55
12

A self-assembled nanoscale robotic arm controlled by electric fields.
Enzo Kopperger, Jonathan List, Sushi Madhira, Florian Rothfischer, Don C Lamb, Friedrich C Simmel. Science 2018
119
7

Structural DNA nanotechnology: state of the art and future perspective.
Fei Zhang, Jeanette Nangreave, Yan Liu, Hao Yan. J Am Chem Soc 2014
279
7

Nanomechanical DNA origami 'single-molecule beacons' directly imaged by atomic force microscopy.
Akinori Kuzuya, Yusuke Sakai, Takahiro Yamazaki, Yan Xu, Makoto Komiyama. Nat Commun 2011
136
7

DNA Quadruple Helices in Nanotechnology.
Jean-Louis Mergny, Dipankar Sen. Chem Rev 2019
110
6

Three-dimensional structures self-assembled from DNA bricks.
Yonggang Ke, Luvena L Ong, William M Shih, Peng Yin. Science 2012
582
6

Toehold switches: de-novo-designed regulators of gene expression.
Alexander A Green, Pamela A Silver, James J Collins, Peng Yin. Cell 2014
341
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.