A citation-based method for searching scientific literature

Nicole Cherng, Alexander A Shishkin, Lucas I Schlager, Ryan H Tuck, Laura Sloan, Robert Matera, Partha S Sarkar, Tetsuo Ashizawa, Catherine H Freudenreich, Sergei M Mirkin. Proc Natl Acad Sci U S A 2011
Times Cited: 38







List of co-cited articles
673 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Large-scale expansions of Friedreich's ataxia GAA repeats in yeast.
Alexander A Shishkin, Irina Voineagu, Robert Matera, Nicole Cherng, Brook T Chernet, Maria M Krasilnikova, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Mol Cell 2009
99
73

SRS2 and SGS1 prevent chromosomal breaks and stabilize triplet repeats by restraining recombination.
Alix Kerrest, Ranjith P Anand, Rangapriya Sundararajan, Rodrigo Bermejo, Giordano Liberi, Bernard Dujon, Catherine H Freudenreich, Guy-Franck Richard. Nat Struct Mol Biol 2009
78
42

Expansion and length-dependent fragility of CTG repeats in yeast.
C H Freudenreich, S M Kantrow, V A Zakian. Science 1998
347
39




Chromosome fragility at GAA tracts in yeast depends on repeat orientation and requires mismatch repair.
Hyun-Min Kim, Vidhya Narayanan, Piotr A Mieczkowski, Thomas D Petes, Maria M Krasilnikova, Sergei M Mirkin, Kirill S Lobachev. EMBO J 2008
77
34

Postreplication repair inhibits CAG.CTG repeat expansions in Saccharomyces cerevisiae.
Danielle L Daee, Tony Mertz, Robert S Lahue. Mol Cell Biol 2007
49
31

Mutations in yeast replication proteins that increase CAG/CTG expansions also increase repeat fragility.
Julie L Callahan, Kenneth J Andrews, Virginia A Zakian, Catherine H Freudenreich. Mol Cell Biol 2003
84
31

The balancing act of DNA repeat expansions.
Jane C Kim, Sergei M Mirkin. Curr Opin Genet Dev 2013
72
26


Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins.
Irina Voineagu, Vidhya Narayanan, Kirill S Lobachev, Sergei M Mirkin. Proc Natl Acad Sci U S A 2008
176
23


Role of DNA polymerases in repeat-mediated genome instability.
Kartik A Shah, Alexander A Shishkin, Irina Voineagu, Youri I Pavlov, Polina V Shcherbakova, Sergei M Mirkin. Cell Rep 2012
45
23

Genome-wide screen identifies pathways that govern GAA/TTC repeat fragility and expansions in dividing and nondividing yeast cells.
Yu Zhang, Alexander A Shishkin, Yuri Nishida, Dana Marcinkowski-Desmond, Natalie Saini, Kirill V Volkov, Sergei M Mirkin, Kirill S Lobachev. Mol Cell 2012
48
23

Unpaired structures in SCA10 (ATTCT)n.(AGAAT)n repeats.
Vladimir N Potaman, John J Bissler, Vera I Hashem, Elena A Oussatcheva, Lu Lu, Luda S Shlyakhtenko, Yuri L Lyubchenko, Tohru Matsuura, Tetsuo Ashizawa, Michael Leffak,[...]. J Mol Biol 2003
68
23

Overcoming natural replication barriers: differential helicase requirements.
Ranjith P Anand, Kartik A Shah, Hengyao Niu, Patrick Sung, Sergei M Mirkin, Catherine H Freudenreich. Nucleic Acids Res 2012
60
23

Replication-dependent instability at (CTG) x (CAG) repeat hairpins in human cells.
Guoqi Liu, Xiaomi Chen, John J Bissler, Richard R Sinden, Michael Leffak. Nat Chem Biol 2010
109
23

Repeat instability during DNA repair: Insights from model systems.
Karen Usdin, Nealia C M House, Catherine H Freudenreich. Crit Rev Biochem Mol Biol 2015
106
23

Regulation of recombination at yeast nuclear pores controls repair and triplet repeat stability.
Xiaofeng A Su, Vincent Dion, Susan M Gasser, Catherine H Freudenreich. Genes Dev 2015
78
23

Large expansion of the ATTCT pentanucleotide repeat in spinocerebellar ataxia type 10.
T Matsuura, T Yamagata, D L Burgess, A Rasmussen, R P Grewal, K Watase, M Khajavi, A E McCall, C F Davis, L Zu,[...]. Nat Genet 2000
357
21


Repeat instability as the basis for human diseases and as a potential target for therapy.
Arturo López Castel, John D Cleary, Christopher E Pearson. Nat Rev Mol Cell Biol 2010
299
21

Replication stalling at Friedreich's ataxia (GAA)n repeats in vivo.
Maria M Krasilnikova, Sergei M Mirkin. Mol Cell Biol 2004
145
21

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
620
21

Replication fork regression in repetitive DNAs.
Nicole Fouché, Sezgin Ozgür, Debasmita Roy, Jack D Griffith. Nucleic Acids Res 2006
73
21

Replication and expansion of trinucleotide repeats in yeast.
Richard Pelletier, Maria M Krasilnikova, George M Samadashwily, Robert Lahue, Sergei M Mirkin. Mol Cell Biol 2003
123
21


RTEL1 inhibits trinucleotide repeat expansions and fragility.
Aisling Frizzell, Jennifer H G Nguyen, Mark I R Petalcorin, Katherine D Turner, Simon J Boulton, Catherine H Freudenreich, Robert S Lahue. Cell Rep 2014
24
33

Replication fork stalling at natural impediments.
Ekaterina V Mirkin, Sergei M Mirkin. Microbiol Mol Biol Rev 2007
361
18

Friedreich's ataxia (GAA)n•(TTC)n repeats strongly stimulate mitotic crossovers in Saccharomyces cerevisae.
Wei Tang, Margaret Dominska, Patricia W Greenwell, Zachary Harvanek, Kirill S Lobachev, Hyun-Min Kim, Vidhya Narayanan, Sergei M Mirkin, Thomas D Petes. PLoS Genet 2011
36
19

Mrc1, Tof1 and Csm3 inhibit CAG.CTG repeat instability by at least two mechanisms.
David F Razidlo, Robert S Lahue. DNA Repair (Amst) 2008
32
21

Altered replication in human cells promotes DMPK (CTG)(n) · (CAG)(n) repeat instability.
Guoqi Liu, Xiaomi Chen, Yanzhe Gao, Todd Lewis, Joanna Barthelemy, Michael Leffak. Mol Cell Biol 2012
33
21

Trinucleotide repeats that expand in human disease form hairpin structures in vitro.
A M Gacy, G Goellner, N Juranić, S Macura, C T McMurray. Cell 1995
474
18

Friedreich's ataxia-associated GAA repeats induce replication-fork reversal and unusual molecular junctions.
Cindy Follonier, Judith Oehler, Raquel Herrador, Massimo Lopes. Nat Struct Mol Biol 2013
57
18



Genome rearrangements caused by interstitial telomeric sequences in yeast.
Anna Y Aksenova, Patricia W Greenwell, Margaret Dominska, Alexander A Shishkin, Jane C Kim, Thomas D Petes, Sergei M Mirkin. Proc Natl Acad Sci U S A 2013
51
18

Replication stalling and heteroduplex formation within CAG/CTG trinucleotide repeats by mismatch repair.
David Viterbo, Grégoire Michoud, Valentine Mosbach, Bernard Dujon, Guy-Franck Richard. DNA Repair (Amst) 2016
27
25




Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
194
15

Naturally occurring H-DNA-forming sequences are mutagenic in mammalian cells.
Guliang Wang, Karen M Vasquez. Proc Natl Acad Sci U S A 2004
125
15


Srs2 helicase of Saccharomyces cerevisiae selectively unwinds triplet repeat DNA.
Saumitri Bhattacharyya, Robert S Lahue. J Biol Chem 2005
23
26

Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility.
Irina Voineagu, Christine F Surka, Alexander A Shishkin, Maria M Krasilnikova, Sergei M Mirkin. Nat Struct Mol Biol 2009
93
15

NuA4 initiates dynamic histone H4 acetylation to promote high-fidelity sister chromatid recombination at postreplication gaps.
Nealia C M House, Jiahui H Yang, Stephen C Walsh, Jonathan M Moy, Catherine H Freudenreich. Mol Cell 2014
35
17

Genomic deletions and point mutations induced in Saccharomyces cerevisiae by the trinucleotide repeats (GAA·TTC) associated with Friedreich's ataxia.
Wei Tang, Margaret Dominska, Malgorzata Gawel, Patricia W Greenwell, Thomas D Petes. DNA Repair (Amst) 2013
18
33

Coupling transcriptional state to large-scale repeat expansions in yeast.
Kartik A Shah, Ryan J McGinty, Vera I Egorova, Sergei M Mirkin. Cell Rep 2014
12
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.