A citation-based method for searching scientific literature

Attila Németh, Gernot Längst. Trends Genet 2011
Times Cited: 133







List of co-cited articles
1212 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Initial genomics of the human nucleolus.
Attila Németh, Ana Conesa, Javier Santoyo-Lopez, Ignacio Medina, David Montaner, Bálint Péterfia, Irina Solovei, Thomas Cremer, Joaquin Dopazo, Gernot Längst. PLoS Genet 2010
243
32

The multifunctional nucleolus.
François-Michel Boisvert, Silvana van Koningsbruggen, Joaquín Navascués, Angus I Lamond. Nat Rev Mol Cell Biol 2007
29

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
25

High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli.
Silvana van Koningsbruggen, Marek Gierlinski, Pietá Schofield, David Martin, Geoffey J Barton, Yavuz Ariyurek, Johan T den Dunnen, Angus I Lamond. Mol Biol Cell 2010
203
24

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
22

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
21

The shared genomic architecture of human nucleolar organizer regions.
Ioanna Floutsakou, Saumya Agrawal, Thong T Nguyen, Cathal Seoighe, Austen R D Ganley, Brian McStay. Genome Res 2013
73
27

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.
Lars Guelen, Ludo Pagie, Emilie Brasset, Wouter Meuleman, Marius B Faza, Wendy Talhout, Bert H Eussen, Annelies de Klein, Lodewyk Wessels, Wouter de Laat,[...]. Nature 2008
19

The epigenetics of rRNA genes: from molecular to chromosome biology.
Brian McStay, Ingrid Grummt. Annu Rev Cell Dev Biol 2008
364
19


The nucleolus.
Thoru Pederson. Cold Spring Harb Perspect Biol 2011
227
18

Single-cell dynamics of genome-nuclear lamina interactions.
Jop Kind, Ludo Pagie, Havva Ortabozkoyun, Shelagh Boyle, Sandra S de Vries, Hans Janssen, Mario Amendola, Leisha D Nolen, Wendy A Bickmore, Bas van Steensel. Cell 2013
422
17

The nucleolus under stress.
Séverine Boulon, Belinda J Westman, Saskia Hutten, François-Michel Boisvert, Angus I Lamond. Mol Cell 2010
636
17

Location of ribosomal DNA in the human chromosome complement.
A S Henderson, D Warburton, K C Atwood. Proc Natl Acad Sci U S A 1972
532
17

Genomic architecture and inheritance of human ribosomal RNA gene clusters.
Dawn M Stults, Michael W Killen, Heather H Pierce, Andrew J Pierce. Genome Res 2008
179
17

Nucleolus: the fascinating nuclear body.
Valentina Sirri, Silvio Urcuqui-Inchima, Pascal Roussel, Danièle Hernandez-Verdun. Histochem Cell Biol 2008
255
15

UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery.
Christine Mais, Jane E Wright, José-Luis Prieto, Samantha L Raggett, Brian McStay. Genes Dev 2005
137
15

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
790
14


Chromosome territories.
Thomas Cremer, Marion Cremer. Cold Spring Harb Perspect Biol 2010
675
13


Human rRNA gene clusters are recombinational hotspots in cancer.
Dawn M Stults, Michael W Killen, Erica P Williamson, Jon S Hourigan, H David Vargas, Susanne M Arnold, Jeffrey A Moscow, Andrew J Pierce. Cancer Res 2009
99
13

Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes.
Clifford P Brangwynne, Timothy J Mitchison, Anthony A Hyman. Proc Natl Acad Sci U S A 2011
638
13

Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Elphège P Nora, Bryan R Lajoie, Edda G Schulz, Luca Giorgetti, Ikuhiro Okamoto, Nicolas Servant, Tristan Piolot, Nynke L van Berkum, Johannes Meisig, John Sedat,[...]. Nature 2012
12

CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species.
Timur M Yusufzai, Hideaki Tagami, Yoshihiro Nakatani, Gary Felsenfeld. Mol Cell 2004
369
12


Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation.
Daan Peric-Hupkes, Wouter Meuleman, Ludo Pagie, Sophia W M Bruggeman, Irina Solovei, Wim Brugman, Stefan Gräf, Paul Flicek, Ron M Kerkhoven, Maarten van Lohuizen,[...]. Mol Cell 2010
666
12


Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.
Frédéric Pontvianne, Marie-Christine Carpentier, Nathalie Durut, Veronika Pavlištová, Karin Jaške, Šárka Schořová, Hugues Parrinello, Marine Rohmer, Craig S Pikaard, Miloslava Fojtová,[...]. Cell Rep 2016
79
15

Structure and function of the nucleolus in the spotlight.
Ivan Raska, Peter J Shaw, Dusan Cmarko. Curr Opin Cell Biol 2006
148
11

Abundance of ribosomal RNA gene copies maintains genome integrity.
Satoru Ide, Takaaki Miyazaki, Hisaji Maki, Takehiko Kobayashi. Science 2010
200
11

Nucleolus and nuclear periphery: velcro for heterochromatin.
Jan Padeken, Patrick Heun. Curr Opin Cell Biol 2014
107
11


Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Sofia A Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, Jan Marten Schmidt, Elizabeth Detmar, Mason M Lai, Alexander A Shishkin, Prashant Bhat, Yodai Takei,[...]. Cell 2018
350
11

DNA sequence-dependent compartmentalization and silencing of chromatin at the nuclear lamina.
Joseph M Zullo, Ignacio A Demarco, Roger Piqué-Regi, Daniel J Gaffney, Charles B Epstein, Chauncey J Spooner, Teresa R Luperchio, Bradley E Bernstein, Jonathan K Pritchard, Karen L Reddy,[...]. Cell 2012
301
10

LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation.
Irina Solovei, Audrey S Wang, Katharina Thanisch, Christine S Schmidt, Stefan Krebs, Monika Zwerger, Tatiana V Cohen, Didier Devys, Roland Foisner, Leo Peichl,[...]. Cell 2013
486
10





Integrative genomic analysis of human ribosomal DNA.
Gabriel E Zentner, Alina Saiakhova, Pavel Manaenkov, Mark D Adams, Peter C Scacheri. Nucleic Acids Res 2011
108
10

Grabbing the genome by the NADs.
Timothy D Matheson, Paul D Kaufman. Chromosoma 2016
30
33

Genome-wide maps of nuclear lamina interactions in single human cells.
Jop Kind, Ludo Pagie, Sandra S de Vries, Leila Nahidiazar, Siddharth S Dey, Magda Bienko, Ye Zhan, Bryan Lajoie, Carolyn A de Graaf, Mario Amendola,[...]. Cell 2015
253
10


Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes.
John G Gibbons, Alan T Branco, Susana A Godinho, Shoukai Yu, Bernardo Lemos. Proc Natl Acad Sci U S A 2015
105
10

Ribosomal DNA copy number loss and sequence variation in cancer.
Baoshan Xu, Hua Li, John M Perry, Vijay Pratap Singh, Jay Unruh, Zulin Yu, Musinu Zakari, William McDowell, Linheng Li, Jennifer L Gerton. PLoS Genet 2017
75
13

Nucleolar proteome dynamics.
Jens S Andersen, Yun W Lam, Anthony K L Leung, Shao-En Ong, Carol E Lyon, Angus I Lamond, Matthias Mann. Nature 2005
858
9

Human acrocentric chromosomes with transcriptionally silent nucleolar organizer regions associate with nucleoli.
G J Sullivan, J M Bridger, A P Cuthbert, R F Newbold, W A Bickmore, B McStay. EMBO J 2001
94
9

Recruitment to the nuclear periphery can alter expression of genes in human cells.
Lee E Finlan, Duncan Sproul, Inga Thomson, Shelagh Boyle, Elizabeth Kerr, Paul Perry, Bauke Ylstra, Jonathan R Chubb, Wendy A Bickmore. PLoS Genet 2008
401
9

The nucleoplasmin homolog NLP mediates centromere clustering and anchoring to the nucleolus.
Jan Padeken, María José Mendiburo, Sarantis Chlamydas, Hans-Jürgen Schwarz, Elisabeth Kremmer, Patrick Heun. Mol Cell 2013
63
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.