A citation-based method for searching scientific literature

Andrew J Bannister, Tony Kouzarides. Cell Res 2011
Times Cited: 2484







List of co-cited articles
765 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of the nucleosome core particle at 2.8 A resolution.
K Luger, A W Mäder, R K Richmond, D F Sargent, T J Richmond. Nature 1997
14


Translating the histone code.
T Jenuwein, C D Allis. Science 2001
11

The language of covalent histone modifications.
B D Strahl, C D Allis. Nature 2000
11

High-resolution profiling of histone methylations in the human genome.
Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao. Cell 2007
10

The molecular hallmarks of epigenetic control.
C David Allis, Thomas Jenuwein. Nat Rev Genet 2016
893
10

Writing, erasing and reading histone lysine methylations.
Kwangbeom Hyun, Jongcheol Jeon, Kihyun Park, Jaehoon Kim. Exp Mol Med 2017
300
9


DNA methylation and its basic function.
Lisa D Moore, Thuc Le, Guoping Fan. Neuropsychopharmacology 2013
925
8



A bivalent chromatin structure marks key developmental genes in embryonic stem cells.
Bradley E Bernstein, Tarjei S Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath,[...]. Cell 2006
7

Histone exchange, chromatin structure and the regulation of transcription.
Swaminathan Venkatesh, Jerry L Workman. Nat Rev Mol Cell Biol 2015
466
7




Epigenetic modifications: basic mechanisms and role in cardiovascular disease.
Diane E Handy, Rita Castro, Joseph Loscalzo. Circulation 2011
347
6

The diverse roles of DNA methylation in mammalian development and disease.
Maxim V C Greenberg, Deborah Bourc'his. Nat Rev Mol Cell Biol 2019
356
6

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.
Luke A Gilbert, Matthew H Larson, Leonardo Morsut, Zairan Liu, Gloria A Brar, Sandra E Torres, Noam Stern-Ginossar, Onn Brandman, Evan H Whitehead, Jennifer A Doudna,[...]. Cell 2013
6

Writers and readers of histone acetylation: structure, mechanism, and inhibition.
Ronen Marmorstein, Ming-Ming Zhou. Cold Spring Harb Perspect Biol 2014
209
6



Epigenetics: a landscape takes shape.
Aaron D Goldberg, C David Allis, Emily Bernstein. Cell 2007
6

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
6

Erasers of histone acetylation: the histone deacetylase enzymes.
Edward Seto, Minoru Yoshida. Cold Spring Harb Perspect Biol 2014
666
6

Perceiving the epigenetic landscape through histone readers.
Catherine A Musselman, Marie-Eve Lalonde, Jacques Côté, Tatiana G Kutateladze. Nat Struct Mol Biol 2012
443
6

Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
5


An operational definition of epigenetics.
Shelley L Berger, Tony Kouzarides, Ramin Shiekhattar, Ali Shilatifard. Genes Dev 2009
896
5

Lateral Thinking: How Histone Modifications Regulate Gene Expression.
Moyra Lawrence, Sylvain Daujat, Robert Schneider. Trends Genet 2016
297
5

Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis.
Hideaki Tagami, Dominique Ray-Gallet, Geneviève Almouzni, Yoshihiro Nakatani. Cell 2004
895
5

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.
Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche,[...]. Nature 2007
5

Histone H3K27ac separates active from poised enhancers and predicts developmental state.
Menno P Creyghton, Albert W Cheng, G Grant Welstead, Tristan Kooistra, Bryce W Carey, Eveline J Steine, Jacob Hanna, Michael A Lodato, Garrett M Frampton, Phillip A Sharp,[...]. Proc Natl Acad Sci U S A 2010
5

The structure of DNA in the nucleosome core.
Timothy J Richmond, Curt A Davey. Nature 2003
766
5

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
5

Role of histone H3 lysine 27 methylation in Polycomb-group silencing.
Ru Cao, Liangjun Wang, Hengbin Wang, Li Xia, Hediye Erdjument-Bromage, Paul Tempst, Richard S Jones, Yi Zhang. Science 2002
5

Non-coding RNAs as direct and indirect modulators of epigenetic regulation.
Veronica J Peschansky, Claes Wahlestedt. Epigenetics 2014
254
5

Non-coding RNAs as regulators in epigenetics (Review).
Jian-Wei Wei, Kai Huang, Chao Yang, Chun-Sheng Kang. Oncol Rep 2017
179
5

Epigenetic modifications and human disease.
Anna Portela, Manel Esteller. Nat Biotechnol 2010
5

Histone Modifications and Cancer.
James E Audia, Robert M Campbell. Cold Spring Harb Perspect Biol 2016
211
5

The timeline of epigenetic drug discovery: from reality to dreams.
A Ganesan, Paola B Arimondo, Marianne G Rots, Carmen Jeronimo, María Berdasco. Clin Epigenetics 2019
88
5

A double take on bivalent promoters.
Philipp Voigt, Wee-Wei Tee, Danny Reinberg. Genes Dev 2013
461
5

Perceptions of epigenetics.
Adrian Bird. Nature 2007
5

Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers.
Isaac B Hilton, Anthony M D'Ippolito, Christopher M Vockley, Pratiksha I Thakore, Gregory E Crawford, Timothy E Reddy, Charles A Gersbach. Nat Biotechnol 2015
884
5

Histone demethylation mediated by the nuclear amine oxidase homolog LSD1.
Yujiang Shi, Fei Lan, Caitlin Matson, Peter Mulligan, Johnathan R Whetstine, Philip A Cole, Robert A Casero, Yang Shi. Cell 2004
5

Model-based analysis of ChIP-Seq (MACS).
Yong Zhang, Tao Liu, Clifford A Meyer, Jérôme Eeckhoute, David S Johnson, Bradley E Bernstein, Chad Nusbaum, Richard M Myers, Myles Brown, Wei Li,[...]. Genome Biol 2008
5

DNA methylation and cancer.
Marta Kulis, Manel Esteller. Adv Genet 2010
707
5

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
5

An atlas of active enhancers across human cell types and tissues.
Robin Andersson, Claudia Gebhard, Irene Miguel-Escalada, Ilka Hoof, Jette Bornholdt, Mette Boyd, Yun Chen, Xiaobei Zhao, Christian Schmidl, Takahiro Suzuki,[...]. Nature 2014
4

Histone H2A variants in nucleosomes and chromatin: more or less stable?
Clemens Bönisch, Sandra B Hake. Nucleic Acids Res 2012
169
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.