A citation-based method for searching scientific literature

Wigard P Kloosterman, Victor Guryev, Mark van Roosmalen, Karen J Duran, Ewart de Bruijn, Saskia C M Bakker, Tom Letteboer, Bernadette van Nesselrooij, Ron Hochstenbach, Martin Poot, Edwin Cuppen. Hum Mol Genet 2011
Times Cited: 210







List of co-cited articles
735 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Massive genomic rearrangement acquired in a single catastrophic event during cancer development.
Philip J Stephens, Chris D Greenman, Beiyuan Fu, Fengtang Yang, Graham R Bignell, Laura J Mudie, Erin D Pleasance, King Wai Lau, David Beare, Lucy A Stebbings,[...]. Cell 2011
60

Chromothripsis from DNA damage in micronuclei.
Cheng-Zhong Zhang, Alexander Spektor, Hauke Cornils, Joshua M Francis, Emily K Jackson, Shiwei Liu, Matthew Meyerson, David Pellman. Nature 2015
574
45

Chromosome catastrophes involve replication mechanisms generating complex genomic rearrangements.
Pengfei Liu, Ayelet Erez, Sandesh C Sreenath Nagamani, Shweta U Dhar, Katarzyna E Kołodziejska, Avinash V Dharmadhikari, M Lance Cooper, Joanna Wiszniewska, Feng Zhang, Marjorie A Withers,[...]. Cell 2011
291
42

Constitutional chromothripsis rearrangements involve clustered double-stranded DNA breaks and nonhomologous repair mechanisms.
Wigard P Kloosterman, Masoumeh Tavakoli-Yaraki, Markus J van Roosmalen, Ellen van Binsbergen, Ivo Renkens, Karen Duran, Lucia Ballarati, Sarah Vergult, Daniela Giardino, Kerstin Hansson,[...]. Cell Rep 2012
157
42

DNA breaks and chromosome pulverization from errors in mitosis.
Karen Crasta, Neil J Ganem, Regina Dagher, Alexandra B Lantermann, Elena V Ivanova, Yunfeng Pan, Luigi Nezi, Alexei Protopopov, Dipanjan Chowdhury, David Pellman. Nature 2012
751
36

Chromothripsis and Kataegis Induced by Telomere Crisis.
John Maciejowski, Yilong Li, Nazario Bosco, Peter J Campbell, Titia de Lange. Cell 2015
347
34

Criteria for inference of chromothripsis in cancer genomes.
Jan O Korbel, Peter J Campbell. Cell 2013
311
33


Punctuated evolution of prostate cancer genomes.
Sylvan C Baca, Davide Prandi, Michael S Lawrence, Juan Miguel Mosquera, Alessandro Romanel, Yotam Drier, Kyung Park, Naoki Kitabayashi, Theresa Y MacDonald, Mahmoud Ghandi,[...]. Cell 2013
773
28

A germline chromothripsis event stably segregating in 11 individuals through three generations.
Birgitte Bertelsen, Lusine Nazaryan-Petersen, Wei Sun, Mana M Mehrjouy, Gangcai Xie, Wei Chen, Lena E Hjermind, Peter E M Taschner, Zeynep Tümer. Genet Med 2016
38
73

Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations.
Tobias Rausch, David T W Jones, Marc Zapatka, Adrian M Stütz, Thomas Zichner, Joachim Weischenfeldt, Natalie Jäger, Marc Remke, David Shih, Paul A Northcott,[...]. Cell 2012
548
28

Complex reorganization and predominant non-homologous repair following chromosomal breakage in karyotypically balanced germline rearrangements and transgenic integration.
Colby Chiang, Jessie C Jacobsen, Carl Ernst, Carrie Hanscom, Adrian Heilbut, Ian Blumenthal, Ryan E Mills, Andrew Kirby, Amelia M Lindgren, Skye R Rudiger,[...]. Nat Genet 2012
170
26

Chromothripsis in healthy individuals affects multiple protein-coding genes and can result in severe congenital abnormalities in offspring.
Mirjam S de Pagter, Markus J van Roosmalen, Annette F Baas, Ivo Renkens, Karen J Duran, Ellen van Binsbergen, Masoumeh Tavakoli-Yaraki, Ron Hochstenbach, Lars T van der Veken, Edwin Cuppen,[...]. Am J Hum Genet 2015
51
50

Selective Y centromere inactivation triggers chromosome shattering in micronuclei and repair by non-homologous end joining.
Peter Ly, Levi S Teitz, Dong H Kim, Ofer Shoshani, Helen Skaletsky, Daniele Fachinetti, David C Page, Don W Cleveland. Nat Cell Biol 2017
130
23

Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome.
Ryan L Collins, Harrison Brand, Claire E Redin, Carrie Hanscom, Caroline Antolik, Matthew R Stone, Joseph T Glessner, Tamara Mason, Giulia Pregno, Naghmeh Dorrani,[...]. Genome Biol 2017
92
25

Chromothripsis and beyond: rapid genome evolution from complex chromosomal rearrangements.
Cheng-Zhong Zhang, Mitchell L Leibowitz, David Pellman. Genes Dev 2013
161
22

Germline Chromothripsis Driven by L1-Mediated Retrotransposition and Alu/Alu Homologous Recombination.
Lusine Nazaryan-Petersen, Birgitte Bertelsen, Mads Bak, Lars Jønson, Niels Tommerup, Dustin C Hancks, Zeynep Tümer. Hum Mutat 2016
34
61

Unbalanced translocations arise from diverse mutational mechanisms including chromothripsis.
Brooke Weckselblatt, Karen E Hermetz, M Katharine Rudd. Genome Res 2015
42
50


A cell-based model system links chromothripsis with hyperploidy.
Balca R Mardin, Alexandros P Drainas, Sebastian M Waszak, Joachim Weischenfeldt, Mayumi Isokane, Adrian M Stütz, Benjamin Raeder, Theocharis Efthymiopoulos, Christopher Buccitelli, Maia Segura-Wang,[...]. Mol Syst Biol 2015
81
22

Chromothriptic cure of WHIM syndrome.
David H McDermott, Ji-Liang Gao, Qian Liu, Marie Siwicki, Craig Martens, Paejonette Jacobs, Daniel Velez, Erin Yim, Christine R Bryke, Nancy Hsu,[...]. Cell 2015
110
17

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes.
Jan J Molenaar, Jan Koster, Danny A Zwijnenburg, Peter van Sluis, Linda J Valentijn, Ida van der Ploeg, Mohamed Hamdi, Johan van Nes, Bart A Westerman, Jennemiek van Arkel,[...]. Nature 2012
583
17

Catastrophic cellular events leading to complex chromosomal rearrangements in the germline.
M Fukami, H Shima, E Suzuki, T Ogata, K Matsubara, T Kamimaki. Clin Genet 2017
27
62

A Distinct Class of Chromoanagenesis Events Characterized by Focal Copy Number Gains.
Heleen Masset, Matthew S Hestand, Hilde Van Esch, Pascale Kleinfinger, Julie Plaisancié, Alexandra Afenjar, Romain Molignier, Caroline Schluth-Bolard, Damien Sanlaville, Joris R Vermeesch. Hum Mutat 2016
22
72

Human Structural Variation: Mechanisms of Chromosome Rearrangements.
Brooke Weckselblatt, M Katharine Rudd. Trends Genet 2015
106
16

Complex chromosomal rearrangements: origin and meiotic behavior.
F Pellestor, T Anahory, G Lefort, J Puechberty, T Liehr, B Hédon, P Sarda. Hum Reprod Update 2011
93
17

Chromothripsis: potential origin in gametogenesis and preimplantation cell divisions. A review.
Franck Pellestor, Vincent Gatinois, Jacques Puechberty, David Geneviève, Geneviève Lefort. Fertil Steril 2014
44
36

Chromothripsis in congenital disorders and cancer: similarities and differences.
Wigard P Kloosterman, Edwin Cuppen. Curr Opin Cell Biol 2013
64
25




Nuclear envelope assembly defects link mitotic errors to chromothripsis.
Shiwei Liu, Mijung Kwon, Mark Mannino, Nachen Yang, Fioranna Renda, Alexey Khodjakov, David Pellman. Nature 2018
129
15

Chromothripsis and cancer: causes and consequences of chromosome shattering.
Josep V Forment, Abderrahmane Kaidi, Stephen P Jackson. Nat Rev Cancer 2012
232
14

Catastrophic nuclear envelope collapse in cancer cell micronuclei.
Emily M Hatch, Andrew H Fischer, Thomas J Deerinck, Martin W Hetzer. Cell 2013
363
14

Chromothripsis in cancer cells: An update.
Agata Rode, Kendra Korinna Maass, Karolin Viktoria Willmund, Peter Lichter, Aurélie Ernst. Int J Cancer 2016
82
17

Chromothripsis: chromosomes in crisis.
Mathew J K Jones, Prasad V Jallepalli. Dev Cell 2012
101
13

Mechanisms underlying structural variant formation in genomic disorders.
Claudia M B Carvalho, James R Lupski. Nat Rev Genet 2016
292
13

The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
Claire Redin, Harrison Brand, Ryan L Collins, Tammy Kammin, Elyse Mitchell, Jennelle C Hodge, Carrie Hanscom, Vamsee Pillalamarri, Catarina M Seabra, Mary-Alice Abbott,[...]. Nat Genet 2017
138
13

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing.
Isidro Cortés-Ciriano, Jake June-Koo Lee, Ruibin Xi, Dhawal Jain, Youngsook L Jung, Lixing Yang, Dmitry Gordenin, Leszek J Klimczak, Cheng-Zhong Zhang, David S Pellman,[...]. Nat Genet 2020
154
13

Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms.
Ankit Malhotra, Michael Lindberg, Gregory G Faust, Mitchell L Leibowitz, Royden A Clark, Ryan M Layer, Aaron R Quinlan, Ira M Hall. Genome Res 2013
123
12

The strength of combined cytogenetic and mate-pair sequencing techniques illustrated by a germline chromothripsis rearrangement involving FOXP2.
Lusine Nazaryan, Eunice G Stefanou, Claus Hansen, Nadezda Kosyakova, Mads Bak, Freddie H Sharkey, Theodora Mantziou, Anastasios D Papanastasiou, Voula Velissariou, Thomas Liehr,[...]. Eur J Hum Genet 2014
40
30

Prenatal diagnosis of chromothripsis, with nine breaks characterized by karyotyping, FISH, microarray and whole-genome sequencing.
M J Macera, A Sobrino, B Levy, V Jobanputra, V Aggarwal, A Mills, C Esteves, C Hanscom, S Pereira, V Pillalamarri,[...]. Prenat Diagn 2015
25
48

The architecture and evolution of cancer neochromosomes.
Dale W Garsed, Owen J Marshall, Vincent D A Corbin, Arthur Hsu, Leon Di Stefano, Jan Schröder, Jason Li, Zhi-Ping Feng, Bo W Kim, Mark Kowarsky,[...]. Cancer Cell 2014
108
12

Chromothripsis-like patterns are recurring but heterogeneously distributed features in a survey of 22,347 cancer genome screens.
Haoyang Cai, Nitin Kumar, Homayoun C Bagheri, Christian von Mering, Mark D Robinson, Michael Baudis. BMC Genomics 2014
72
16

Chromothripsis-like chromosomal rearrangements induced by ionizing radiation using proton microbeam irradiation system.
Maki Morishita, Tomoki Muramatsu, Yumiko Suto, Momoki Hirai, Teruaki Konishi, Shin Hayashi, Daichi Shigemizu, Tatsuhiko Tsunoda, Keiji Moriyama, Johji Inazawa. Oncotarget 2016
34
35

Breaking TADs: How Alterations of Chromatin Domains Result in Disease.
Darío G Lupiáñez, Malte Spielmann, Stefan Mundlos. Trends Genet 2016
205
11

Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer.
Wigard P Kloosterman, Marlous Hoogstraat, Oscar Paling, Masoumeh Tavakoli-Yaraki, Ivo Renkens, Joost S Vermaat, Markus J van Roosmalen, Stef van Lieshout, Isaac J Nijman, Wijnand Roessingh,[...]. Genome Biol 2011
129
11

Catastrophic chromosomal restructuring during genome elimination in plants.
Ek Han Tan, Isabelle M Henry, Maruthachalam Ravi, Keith R Bradnam, Terezie Mandakova, Mohan Pa Marimuthu, Ian Korf, Martin A Lysak, Luca Comai, Simon Wl Chan. Elife 2015
58
18

A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns.
Faiyaz Notta, Michelle Chan-Seng-Yue, Mathieu Lemire, Yilong Li, Gavin W Wilson, Ashton A Connor, Robert E Denroche, Sheng-Ben Liang, Andrew M K Brown, Jaeseung C Kim,[...]. Nature 2016
284
11

Cancer: When catastrophe strikes a cell.
Jose M C Tubio, Xavier Estivill. Nature 2011
52
21


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.