A citation-based method for searching scientific literature

Craig J Ceol, Yariv Houvras, Judit Jane-Valbuena, Steve Bilodeau, David A Orlando, Valentine Battisti, Lauriane Fritsch, William M Lin, Travis J Hollmann, Fabrizio Ferré, Caitlin Bourque, Christopher J Burke, Laura Turner, Audrey Uong, Laura A Johnson, Rameen Beroukhim, Craig H Mermel, Massimo Loda, Slimane Ait-Si-Ali, Levi A Garraway, Richard A Young, Leonard I Zon. Nature 2011
Times Cited: 352







List of co-cited articles
1056 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Up-regulation of histone methyltransferase SETDB1 by multiple mechanisms in hepatocellular carcinoma promotes cancer metastasis.
Chun-Ming Wong, Lai Wei, Cheuk-Ting Law, Daniel Wai-Hung Ho, Felice Ho-Ching Tsang, Sandy Leung-Kuen Au, Karen Man-Fong Sze, Joyce Man-Fong Lee, Carmen Chak-Lui Wong, Irene Oi-Lin Ng. Hepatology 2016
101
22

BRAF mutations are sufficient to promote nevi formation and cooperate with p53 in the genesis of melanoma.
E Elizabeth Patton, Hans R Widlund, Jeffery L Kutok, Kamden R Kopani, James F Amatruda, Ryan D Murphey, Stephane Berghmans, Elizabeth A Mayhall, David Traver, Christopher D M Fletcher,[...]. Curr Biol 2005
437
22

A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation.
Charles K Kaufman, Christian Mosimann, Zi Peng Fan, Song Yang, Andrew J Thomas, Julien Ablain, Justin L Tan, Rachel D Fogley, Ellen van Rooijen, Elliott J Hagedorn,[...]. Science 2016
200
21


Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
734
18


Histone methyltransferase SETDB1 regulates liver cancer cell growth through methylation of p53.
Qi Fei, Ke Shang, Jianhua Zhang, Shannon Chuai, Desheng Kong, Tianlun Zhou, Shijun Fu, Ying Liang, Chong Li, Zhi Chen,[...]. Nat Commun 2015
79
18

Gene amplification of the histone methyltransferase SETDB1 contributes to human lung tumorigenesis.
M Rodriguez-Paredes, A Martinez de Paz, L Simó-Riudalbas, S Sayols, C Moutinho, S Moran, A Villanueva, M Vázquez-Cedeira, P A Lazo, F Carneiro,[...]. Oncogene 2014
90
16

DHODH modulates transcriptional elongation in the neural crest and melanoma.
Richard Mark White, Jennifer Cech, Sutheera Ratanasirintrawoot, Charles Y Lin, Peter B Rahl, Christopher J Burke, Erin Langdon, Matthew L Tomlinson, Jack Mosher, Charles Kaufman,[...]. Nature 2011
309
14

Histone Methyltransferase SETDB1 Promotes the Progression of Colorectal Cancer by Inhibiting the Expression of TP53.
Keli Chen, Fengjiao Zhang, Jie Ding, Yonghao Liang, Zetao Zhan, Yizhi Zhan, Long-Hua Chen, Yi Ding. J Cancer 2017
32
37

Human tumor genomics and zebrafish modeling identify SPRED1 loss as a driver of mucosal melanoma.
Julien Ablain, Mengshu Xu, Harriet Rothschild, Richard C Jordan, Jeffrey K Mito, Brianne H Daniels, Caitlin F Bell, Nancy M Joseph, Hong Wu, Boris C Bastian,[...]. Science 2018
63
19

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
12

Histone methyltransferase SETDB1 contributes to melanoma tumorigenesis and serves as a new potential therapeutic target.
Elias Orouji, Aniello Federico, Lionel Larribère, Daniel Novak, Daniel B Lipka, Yassen Assenov, Sachindra Sachindra, Laura Hüser, Karol Granados, Christoffer Gebhardt,[...]. Int J Cancer 2019
26
46

SETDB1 accelerates tumourigenesis by regulating the WNT signalling pathway.
Qiao-Yang Sun, Ling-Wen Ding, Jin-Fen Xiao, Wenwen Chien, Su-Lin Lim, Norimichi Hattori, Lee Goodglick, David Chia, Vei Mah, Mohammad Alavi,[...]. J Pathol 2015
47
23

Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal.
Jianjiong Gao, Bülent Arman Aksoy, Ugur Dogrusoz, Gideon Dresdner, Benjamin Gross, S Onur Sumer, Yichao Sun, Anders Jacobsen, Rileen Sinha, Erik Larsson,[...]. Sci Signal 2013
11

A Quantitative System for Studying Metastasis Using Transparent Zebrafish.
Silja Heilmann, Kajan Ratnakumar, Erin Langdon, Emily Kansler, Isabella Kim, Nathaniel R Campbell, Elizabeth Perry, Amy McMahon, Charles Kaufman, Ellen van Rooijen,[...]. Cancer Res 2015
65
16

A landscape of driver mutations in melanoma.
Eran Hodis, Ian R Watson, Gregory V Kryukov, Stefan T Arold, Marcin Imielinski, Jean-Philippe Theurillat, Elizabeth Nickerson, Daniel Auclair, Liren Li, Chelsea Place,[...]. Cell 2012
11

A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.
Julien Ablain, Ellen M Durand, Song Yang, Yi Zhou, Leonard I Zon. Dev Cell 2015
223
11

Silencing of retrotransposons by SETDB1 inhibits the interferon response in acute myeloid leukemia.
Trinna L Cuellar, Anna-Maria Herzner, Xiaotian Zhang, Yogesh Goyal, Colin Watanabe, Brad A Friedman, Vasantharajan Janakiraman, Steffen Durinck, Jeremy Stinson, David Arnott,[...]. J Cell Biol 2017
74
14

SETDB1-mediated methylation of Akt promotes its K63-linked ubiquitination and activation leading to tumorigenesis.
Guihua Wang, Jie Long, Yuan Gao, Weina Zhang, Fei Han, Chuan Xu, Li Sun, Shun-Chin Yang, Jingqin Lan, Zhenlin Hou,[...]. Nat Cell Biol 2019
64
15

Microenvironment-derived factors driving metastatic plasticity in melanoma.
Isabella S Kim, Silja Heilmann, Emily R Kansler, Yan Zhang, Milena Zimmer, Kajan Ratnakumar, Robert L Bowman, Theresa Simon-Vermot, Myles Fennell, Ralph Garippa,[...]. Nat Commun 2017
83
12

Proviral silencing in embryonic stem cells requires the histone methyltransferase ESET.
Toshiyuki Matsui, Danny Leung, Hiroki Miyashita, Irina A Maksakova, Hitoshi Miyachi, Hiroshi Kimura, Makoto Tachibana, Matthew C Lorincz, Yoichi Shinkai. Nature 2010
468
10

Low MITF/AXL ratio predicts early resistance to multiple targeted drugs in melanoma.
Judith Müller, Oscar Krijgsman, Jennifer Tsoi, Lidia Robert, Willy Hugo, Chunying Song, Xiangju Kong, Patricia A Possik, Paulien D M Cornelissen-Steijger, Marnix H Geukes Foppen,[...]. Nat Commun 2014
339
10

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
9

Role of histone lysine methyltransferases SUV39H1 and SETDB1 in gliomagenesis: modulation of cell proliferation, migration, and colony formation.
Anastasia Spyropoulou, Antonios Gargalionis, Georgia Dalagiorgou, Christos Adamopoulos, Kostas A Papavassiliou, Robert William Lea, Christina Piperi, Athanasios G Papavassiliou. Neuromolecular Med 2014
59
15

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
9

The c-MYC-BMI1 axis is essential for SETDB1-mediated breast tumourigenesis.
Jin-Fen Xiao, Qiao-Yang Sun, Ling-Wen Ding, Wenwen Chien, Xin-Yu Liu, Anand Mayakonda, Yan-Yi Jiang, Xin-Yi Loh, Xue-Bin Ran, Ngan B Doan,[...]. J Pathol 2018
17
52

Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
9

A temporarily distinct subpopulation of slow-cycling melanoma cells is required for continuous tumor growth.
Alexander Roesch, Mizuho Fukunaga-Kalabis, Elizabeth C Schmidt, Susan E Zabierowski, Patricia A Brafford, Adina Vultur, Devraj Basu, Phyllis Gimotty, Thomas Vogt, Meenhard Herlyn. Cell 2010
799
9

Overcoming intrinsic multidrug resistance in melanoma by blocking the mitochondrial respiratory chain of slow-cycling JARID1B(high) cells.
Alexander Roesch, Adina Vultur, Ivan Bogeski, Huan Wang, Katharina M Zimmermann, David Speicher, Christina Körbel, Matthias W Laschke, Phyllis A Gimotty, Stephan E Philipp,[...]. Cancer Cell 2013
422
9

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
9

mAM facilitates conversion by ESET of dimethyl to trimethyl lysine 9 of histone H3 to cause transcriptional repression.
Hengbin Wang, Woojin An, Ru Cao, Li Xia, Hediye Erdjument-Bromage, Bruno Chatton, Paul Tempst, Robert G Roeder, Yi Zhang. Mol Cell 2003
247
9

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq.
Itay Tirosh, Benjamin Izar, Sanjay M Prakadan, Marc H Wadsworth, Daniel Treacy, John J Trombetta, Asaf Rotem, Christopher Rodman, Christine Lian, George Murphy,[...]. Science 2016
9

H3K9 histone methyltransferase, KMT1E/SETDB1, cooperates with the SMAD2/3 pathway to suppress lung cancer metastasis.
Pei-Chun Wu, Jeng-Wei Lu, Jer-Yen Yang, I-Hsuan Lin, Da-Liang Ou, Yu-Hsiang Lin, Kuan-Hsien Chou, Wen-Feng Huang, Wan-Ping Wang, Yih-Leh Huang,[...]. Cancer Res 2014
40
20

Oncogenic NRAS cooperates with p53 loss to generate melanoma in zebrafish.
Michael Dovey, Richard Mark White, Leonard I Zon. Zebrafish 2009
92
8

tp53 mutant zebrafish develop malignant peripheral nerve sheath tumors.
Stéphane Berghmans, Ryan D Murphey, Erno Wienholds, Donna Neuberg, Jeffery L Kutok, Christopher D M Fletcher, John P Morris, Ting Xi Liu, Stefan Schulte-Merker, John P Kanki,[...]. Proc Natl Acad Sci U S A 2005
440
8

MiR-7, inhibited indirectly by lincRNA HOTAIR, directly inhibits SETDB1 and reverses the EMT of breast cancer stem cells by downregulating the STAT3 pathway.
Hongyi Zhang, Kai Cai, Jing Wang, Xiaoying Wang, Kai Cheng, Fangfang Shi, Longwei Jiang, Yunxia Zhang, Jun Dou. Stem Cells 2014
240
8

ESET/SETDB1 gene expression and histone H3 (K9) trimethylation in Huntington's disease.
Hoon Ryu, Junghee Lee, Sean W Hagerty, Byoung Yul Soh, Sara E McAlpin, Kerry A Cormier, Karen M Smith, Robert J Ferrante. Proc Natl Acad Sci U S A 2006
214
8

Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma.
Levi A Garraway, Hans R Widlund, Mark A Rubin, Gad Getz, Aaron J Berger, Sridhar Ramaswamy, Rameen Beroukhim, Danny A Milner, Scott R Granter, Jinyan Du,[...]. Nature 2005
8

A subset of the histone H3 lysine 9 methyltransferases Suv39h1, G9a, GLP, and SETDB1 participate in a multimeric complex.
Lauriane Fritsch, Philippe Robin, Jacques R R Mathieu, Mouloud Souidi, Hélène Hinaux, Claire Rougeulle, Annick Harel-Bellan, Maya Ameyar-Zazoua, Slimane Ait-Si-Ali. Mol Cell 2010
219
8

AKT methylation by SETDB1 promotes AKT kinase activity and oncogenic functions.
Jianping Guo, Xiangpeng Dai, Benoit Laurent, Nana Zheng, Wenjian Gan, Jian Zhang, Ailan Guo, Min Yuan, Pengda Liu, John M Asara,[...]. Nat Cell Biol 2019
58
13

Adipocyte-Derived Lipids Mediate Melanoma Progression via FATP Proteins.
Maomao Zhang, Julie S Di Martino, Robert L Bowman, Nathaniel R Campbell, Sanjeethan C Baksh, Theresa Simon-Vermot, Isabella S Kim, Pearce Haldeman, Chandrani Mondal, Vladimir Yong-Gonzales,[...]. Cancer Discov 2018
127
8

Myc-induced T cell leukemia in transgenic zebrafish.
David M Langenau, David Traver, Adolfo A Ferrando, Jeffery L Kutok, Jon C Aster, John P Kanki, Shuo Lin, Ed Prochownik, Nikolaus S Trede, Leonard I Zon,[...]. Science 2003
380
8

The epigenetic modifier EZH2 controls melanoma growth and metastasis through silencing of distinct tumour suppressors.
Daniel Zingg, Julien Debbache, Simon M Schaefer, Eylul Tuncer, Sandra C Frommel, Phil Cheng, Natalia Arenas-Ramirez, Jessica Haeusel, Yudong Zhang, Mario Bonalli,[...]. Nat Commun 2015
206
8

Toward Minimal Residual Disease-Directed Therapy in Melanoma.
Florian Rambow, Aljosja Rogiers, Oskar Marin-Bejar, Sara Aibar, Julia Femel, Michael Dewaele, Panagiotis Karras, Daniel Brown, Young Hwan Chang, Maria Debiec-Rychter,[...]. Cell 2018
228
8

Whole-genome landscapes of major melanoma subtypes.
Nicholas K Hayward, James S Wilmott, Nicola Waddell, Peter A Johansson, Matthew A Field, Katia Nones, Ann-Marie Patch, Hojabr Kakavand, Ludmil B Alexandrov, Hazel Burke,[...]. Nature 2017
587
8

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
8

Ligand-activated BMP signaling inhibits cell differentiation and death to promote melanoma.
Arvind M Venkatesan, Rajesh Vyas, Alec K Gramann, Karen Dresser, Sharvari Gujja, Sanchita Bhatnagar, Sagar Chhangawala, Camilla Borges Ferreira Gomes, Hualin Simon Xi, Christine G Lian,[...]. J Clin Invest 2018
21
38

Histone methyltransferase SETDB1 promotes colorectal cancer proliferation through the STAT1-CCND1/CDK6 axis.
Lu Yu, Feng Ye, Yi-Yi Li, Yi-Zhi Zhan, Yang Liu, Hong-Mei Yan, Yuan Fang, Yu-Wen Xie, Feng-Jiao Zhang, Long-Hua Chen,[...]. Carcinogenesis 2020
21
38

Significance of histone methyltransferase SETDB1 expression in colon adenocarcinoma.
Yi-Jung Ho, Yueh-Min Lin, Yen-Chi Huang, Jungshan Chang, Kun-Tu Yeh, Liang-In Lin, Zhiyuan Gong, Tsai-Yu Tzeng, Jeng-Wei Lu. APMIS 2017
15
46


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.