A citation-based method for searching scientific literature

Samuel J Aronson, Eugene H Clark, Lawrence J Babb, Samantha Baxter, Lisa M Farwell, Birgit H Funke, Amy Lovelette Hernandez, Victoria A Joshi, Elaine Lyon, Andrew R Parthum, Franklin J Russell, Matthew Varugheese, Thomas C Venman, Heidi L Rehm. Hum Mutat 2011
Times Cited: 56







List of co-cited articles
257 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Communicating new knowledge on previously reported genetic variants.
Samuel J Aronson, Eugene H Clark, Matthew Varugheese, Samantha Baxter, Lawrence J Babb, Heidi L Rehm. Genet Med 2012
70
28

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
23

ACMG recommendations for standards for interpretation and reporting of sequence variations: Revisions 2007.
C Sue Richards, Sherri Bale, Daniel B Bellissimo, Soma Das, Wayne W Grody, Madhuri R Hegde, Elaine Lyon, Brian E Ward. Genet Med 2008
548
21

A systematic approach to assessing the clinical significance of genetic variants.
H Duzkale, J Shen, H McLaughlin, A Alfares, M A Kelly, T J Pugh, B H Funke, H L Rehm, M S Lebo. Clin Genet 2013
115
19

ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
17

ClinVar: public archive of relationships among sequence variation and human phenotype.
Melissa J Landrum, Jennifer M Lee, George R Riley, Wonhee Jang, Wendy S Rubinstein, Deanna M Church, Donna R Maglott. Nucleic Acids Res 2014
17

Electronic medical records and personalized medicine.
Mark A Hoffman, Marc S Williams. Hum Genet 2011
37
21

Technical desiderata for the integration of genomic data into Electronic Health Records.
Daniel R Masys, Gail P Jarvik, Neil F Abernethy, Nicholas R Anderson, George J Papanicolaou, Dina N Paltoo, Mark A Hoffman, Isaac S Kohane, Howard P Levy. J Biomed Inform 2012
65
14

Crossing the omic chasm: a time for omic ancillary systems.
Justin Starren, Marc S Williams, Erwin P Bottinger. JAMA 2013
54
14

LOVD v.2.0: the next generation in gene variant databases.
Ivo F A C Fokkema, Peter E M Taschner, Gerard C P Schaafsma, J Celli, Jeroen F J Laros, Johan T den Dunnen. Hum Mutat 2011
604
12

ClinGen--the Clinical Genome Resource.
Heidi L Rehm, Jonathan S Berg, Lisa D Brooks, Carlos D Bustamante, James P Evans, Melissa J Landrum, David H Ledbetter, Donna R Maglott, Christa Lese Martin, Robert L Nussbaum,[...]. N Engl J Med 2015
555
12

The genome-enabled electronic medical record.
M A Hoffman. J Biomed Inform 2007
49
12

The incidentalome: a threat to genomic medicine.
Isaac S Kohane, Daniel R Masys, Russ B Altman. JAMA 2006
216
10


An integrated map of genetic variation from 1,092 human genomes.
Goncalo R Abecasis, Adam Auton, Lisa D Brooks, Mark A DePristo, Richard M Durbin, Robert E Handsaker, Hyun Min Kang, Gabor T Marth, Gil A McVean. Nature 2012
10

The CLIPMERGE PGx Program: clinical implementation of personalized medicine through electronic health records and genomics-pharmacogenomics.
O Gottesman, S A Scott, S B Ellis, C L Overby, A Ludtke, J-S Hulot, J Hall, K Chatani, K Myers, J L Kannry,[...]. Clin Pharmacol Ther 2013
101
10

A new initiative on precision medicine.
Francis S Collins, Harold Varmus. N Engl J Med 2015
10



Are electronic health records ready for genomic medicine?
Maren T Scheuner, Han de Vries, Benjamin Kim, Robin C Meili, Sarah H Olmstead, Stephanie Teleki. Genet Med 2009
41
12

A national clinical decision support infrastructure to enable the widespread and consistent practice of genomic and personalized medicine.
Kensaku Kawamoto, David F Lobach, Huntington F Willard, Geoffrey S Ginsburg. BMC Med Inform Decis Mak 2009
68
8


A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
8

Operational implementation of prospective genotyping for personalized medicine: the design of the Vanderbilt PREDICT project.
J M Pulley, J C Denny, J F Peterson, G R Bernard, C L Vnencak-Jones, A H Ramirez, J T Delaney, E Bowton, K Brothers, K Johnson,[...]. Clin Pharmacol Ther 2012
273
8

Usability of a novel clinician interface for genetic results.
Pamela M Neri, Stephanie E Pollard, Lynn A Volk, Lisa P Newmark, Matthew Varugheese, Samantha Baxter, Samuel J Aronson, Heidi L Rehm, David W Bates. J Biomed Inform 2012
24
20

The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future.
Omri Gottesman, Helena Kuivaniemi, Gerard Tromp, W Andrew Faucett, Rongling Li, Teri A Manolio, Saskia C Sanderson, Joseph Kannry, Randi Zinberg, Melissa A Basford,[...]. Genet Med 2013
413
8

A survey of informatics approaches to whole-exome and whole-genome clinical reporting in the electronic health record.
Peter Tarczy-Hornoch, Laura Amendola, Samuel J Aronson, Levi Garraway, Stacy Gray, Robert W Grundmeier, Lucia A Hindorff, Gail Jarvik, Dean Karavite, Matthew Lebo,[...]. Genet Med 2013
49
10

Practical challenges in integrating genomic data into the electronic health record.
Abel N Kho, Luke V Rasmussen, John J Connolly, Peggy L Peissig, Justin Starren, Hakon Hakonarson, M Geoffrey Hayes. Genet Med 2013
47
10

The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine.
Jason L Vassy, Denise M Lautenbach, Heather M McLaughlin, Sek Won Kong, Kurt D Christensen, Joel Krier, Isaac S Kohane, Lindsay Z Feuerman, Jennifer Blumenthal-Barby, J Scott Roberts,[...]. Trials 2014
102
8

Clinical interpretation and implications of whole-genome sequencing.
Frederick E Dewey, Megan E Grove, Cuiping Pan, Benjamin A Goldstein, Jonathan A Bernstein, Hassan Chaib, Jason D Merker, Rachel L Goldfeder, Gregory M Enns, Sean P David,[...]. JAMA 2014
302
8

A systematic approach to the reporting of medically relevant findings from whole genome sequencing.
Heather M McLaughlin, Ozge Ceyhan-Birsoy, Kurt D Christensen, Isaac S Kohane, Joel Krier, William J Lane, Denise Lautenbach, Matthew S Lebo, Kalotina Machini, Calum A MacRae,[...]. BMC Med Genet 2014
64
8

A standard variation file format for human genome sequences.
Martin G Reese, Barry Moore, Colin Batchelor, Fidel Salas, Fiona Cunningham, Gabor T Marth, Lincoln Stein, Paul Flicek, Mark Yandell, Karen Eilbeck. Genome Biol 2010
61
7

Genomic and personalized medicine: foundations and applications.
Geoffrey S Ginsburg, Huntington F Willard. Transl Res 2009
265
7

Ten commandments for effective clinical decision support: making the practice of evidence-based medicine a reality.
David W Bates, Gilad J Kuperman, Samuel Wang, Tejal Gandhi, Anne Kittler, Lynn Volk, Cynthia Spurr, Ramin Khorasani, Milenko Tanasijevic, Blackford Middleton. J Am Med Inform Assoc 2003
769
7

Making a definitive diagnosis: successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease.
Elizabeth A Worthey, Alan N Mayer, Grant D Syverson, Daniel Helbling, Benedetta B Bonacci, Brennan Decker, Jaime M Serpe, Trivikram Dasu, Michael R Tschannen, Regan L Veith,[...]. Genet Med 2011
481
7

Development and validation of a computational method for assessment of missense variants in hypertrophic cardiomyopathy.
Daniel M Jordan, Adam Kiezun, Samantha M Baxter, Vineeta Agarwala, Robert C Green, Michael F Murray, Trevor Pugh, Matthew S Lebo, Heidi L Rehm, Birgit H Funke,[...]. Am J Hum Genet 2011
50
8

The Personalized Medicine Coalition: goals and strategies.
Edward Abrahams, Geoffrey S Ginsburg, Mike Silver. Am J Pharmacogenomics 2005
65
7

Clinical implications of the cancer genome.
Laura E Macconaill, Levi A Garraway. J Clin Oncol 2010
130
7

Managing incidental findings and research results in genomic research involving biobanks and archived data sets.
Susan M Wolf, Brittney N Crock, Brian Van Ness, Frances Lawrenz, Jeffrey P Kahn, Laura M Beskow, Mildred K Cho, Michael F Christman, Robert C Green, Ralph Hall,[...]. Genet Med 2012
306
7

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
7


The Human Gene Mutation Database: 2008 update.
Peter D Stenson, Matthew Mort, Edward V Ball, Katy Howells, Andrew D Phillips, Nick St Thomas, David N Cooper. Genome Med 2009
615
7


Taxonomizing, sizing, and overcoming the incidentalome.
Isaac S Kohane, Michael Hsing, Sek Won Kong. Genet Med 2012
90
7


A novel custom resequencing array for dilated cardiomyopathy.
Rebekah S Zimmerman, Stephanie Cox, Neal K Lakdawala, Allison Cirino, Debora Mancini-DiNardo, Eugene Clark, Annette Leon, Elizabeth Duffy, Emily White, Samantha Baxter,[...]. Genet Med 2010
58
7

A framework for variation discovery and genotyping using next-generation DNA sequencing data.
Mark A DePristo, Eric Banks, Ryan Poplin, Kiran V Garimella, Jared R Maguire, Christopher Hartl, Anthony A Philippakis, Guillermo del Angel, Manuel A Rivas, Matt Hanna,[...]. Nat Genet 2011
7

Actionable, pathogenic incidental findings in 1,000 participants' exomes.
Michael O Dorschner, Laura M Amendola, Emily H Turner, Peggy D Robertson, Brian H Shirts, Carlos J Gallego, Robin L Bennett, Kelly L Jones, Mari J Tokita, James T Bennett,[...]. Am J Hum Genet 2013
275
7

Clinical whole-exome sequencing for the diagnosis of mendelian disorders.
Yaping Yang, Donna M Muzny, Jeffrey G Reid, Matthew N Bainbridge, Alecia Willis, Patricia A Ward, Alicia Braxton, Joke Beuten, Fan Xia, Zhiyv Niu,[...]. N Engl J Med 2013
7

A novel clinician interface to improve clinician access to up-to-date genetic results.
Allison R Wilcox, Pamela M Neri, Lynn A Volk, Lisa P Newmark, Eugene H Clark, Lawrence J Babb, Matthew Varugheese, Samuel J Aronson, Heidi L Rehm, David W Bates. J Am Med Inform Assoc 2014
13
30


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.