A citation-based method for searching scientific literature

Thomas M Snyder, Kiran K Khush, Hannah A Valantine, Stephen R Quake. Proc Natl Acad Sci U S A 2011
Times Cited: 224







List of co-cited articles
651 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circulating cell-free DNA enables noninvasive diagnosis of heart transplant rejection.
Iwijn De Vlaminck, Hannah A Valantine, Thomas M Snyder, Calvin Strehl, Garrett Cohen, Helen Luikart, Norma F Neff, Jennifer Okamoto, Daniel Bernstein, Dana Weisshaar,[...]. Sci Transl Med 2014
265
61

Cell-Free DNA and Active Rejection in Kidney Allografts.
Roy D Bloom, Jonathan S Bromberg, Emilio D Poggio, Suphamai Bunnapradist, Anthony J Langone, Puneet Sood, Arthur J Matas, Shikha Mehta, Roslyn B Mannon, Asif Sharfuddin,[...]. J Am Soc Nephrol 2017
228
42

Validation of a Clinical-Grade Assay to Measure Donor-Derived Cell-Free DNA in Solid Organ Transplant Recipients.
Marica Grskovic, David J Hiller, Lane A Eubank, John J Sninsky, Cindy Christopherson, John P Collins, Kathryn Thompson, Mindy Song, Yue S Wang, David Ross,[...]. J Mol Diagn 2016
117
42

Presence of donor-specific DNA in plasma of kidney and liver-transplant recipients.
Y M Lo, M S Tein, C C Pang, C K Yeung, K L Tong, N M Hjelm. Lancet 1998
200
37

Noninvasive monitoring of infection and rejection after lung transplantation.
Iwijn De Vlaminck, Lance Martin, Michael Kertesz, Kapil Patel, Mark Kowarsky, Calvin Strehl, Garrett Cohen, Helen Luikart, Norma F Neff, Jennifer Okamoto,[...]. Proc Natl Acad Sci U S A 2015
181
35

Digital droplet PCR for rapid quantification of donor DNA in the circulation of transplant recipients as a potential universal biomarker of graft injury.
Julia Beck, Sarah Bierau, Stefan Balzer, Reiner Andag, Philipp Kanzow, Jessica Schmitz, Jochen Gaedcke, Onnen Moerer, Jan E Slotta, Philip Walson,[...]. Clin Chem 2013
152
34

Graft-derived cell-free DNA, a noninvasive early rejection and graft damage marker in liver transplantation: A prospective, observational, multicenter cohort study.
Ekkehard Schütz, Anna Fischer, Julia Beck, Markus Harden, Martina Koch, Tilo Wuensch, Martin Stockmann, Björn Nashan, Otto Kollmar, Johannes Matthaei,[...]. PLoS Med 2017
91
32

Noninvasive detection of graft injury after heart transplant using donor-derived cell-free DNA: A prospective multicenter study.
Kiran K Khush, Jignesh Patel, Sean Pinney, Andrew Kao, Rami Alharethi, Eugene DePasquale, Gregory Ewald, Peter Berman, Manreet Kanwar, David Hiller,[...]. Am J Transplant 2019
74
32

Optimizing Detection of Kidney Transplant Injury by Assessment of Donor-Derived Cell-Free DNA via Massively Multiplex PCR.
Tara K Sigdel, Felipe Acosta Archila, Tudor Constantin, Sarah A Prins, Juliane Liberto, Izabella Damm, Parhom Towfighi, Samantha Navarro, Eser Kirkizlar, Zachary P Demko,[...]. J Clin Med 2018
80
27

A rapid noninvasive assay for the detection of renal transplant injury.
Tara K Sigdel, Matthew J Vitalone, Tim Q Tran, Hong Dai, Szu-Chuan Hsieh, Oscar Salvatierra, Minnie M Sarwal. Transplantation 2013
72
29

Highly sensitive noninvasive cardiac transplant rejection monitoring using targeted quantification of donor-specific cell-free deoxyribonucleic acid.
Mats Hidestrand, Aoy Tomita-Mitchell, Pip M Hidestrand, Arnold Oliphant, Mary Goetsch, Karl Stamm, Huan-Ling Liang, Chesney Castleberry, D Woodrow Benson, Gail Stendahl,[...]. J Am Coll Cardiol 2014
56
37

Cell-Free DNA: An Upcoming Biomarker in Transplantation.
E M Gielis, K J Ledeganck, B Y De Winter, J Del Favero, J-L Bosmans, F H J Claas, D Abramowicz, M Eikmans. Am J Transplant 2015
93
21

Cell-free DNA as a noninvasive acute rejection marker in renal transplantation.
Vanessa García Moreira, Belen Prieto García, Jose M Baltar Martín, Francisco Ortega Suárez, Francisco V Alvarez. Clin Chem 2009
96
19

Donor-Derived Cell-Free DNA Is a Novel Universal Biomarker for Allograft Rejection in Solid Organ Transplantation.
J Beck, M Oellerich, U Schulz, V Schauerte, L Reinhard, U Fuchs, C Knabbe, A Zittermann, C Olbricht, J F Gummert,[...]. Transplant Proc 2015
80
23

Early clinical experience using donor-derived cell-free DNA to detect rejection in kidney transplant recipients.
Edmund Huang, Supreet Sethi, Alice Peng, Reiad Najjar, James Mirocha, Mark Haas, Ashley Vo, Stanley C Jordan. Am J Transplant 2019
81
23

Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments.
Kun Sun, Peiyong Jiang, K C Allen Chan, John Wong, Yvonne K Y Cheng, Raymond H S Liang, Wai-kong Chan, Edmond S K Ma, Stephen L Chan, Suk Hang Cheng,[...]. Proc Natl Acad Sci U S A 2015
347
18

Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin.
Matthew W Snyder, Martin Kircher, Andrew J Hill, Riza M Daza, Jay Shendure. Cell 2016
600
17

Monitoring of transplanted liver health by quantification of organ-specific genomic marker in circulating DNA from receptor.
Hada C Macher, Gonzalo Suárez-Artacho, Juan M Guerrero, Miguel A Gómez-Bravo, Sara Álvarez-Gómez, Carmen Bernal-Bellido, Inmaculada Dominguez-Pascual, Amalia Rubio. PLoS One 2014
35
45

Absolute quantification of donor-derived cell-free DNA as a marker of rejection and graft injury in kidney transplantation: Results from a prospective observational study.
Michael Oellerich, Maria Shipkova, Thomas Asendorf, Philip D Walson, Verena Schauerte, Nina Mettenmeyer, Mariana Kabakchiev, Georg Hasche, Hermann-Josef Gröne, Tim Friede,[...]. Am J Transplant 2019
69
23

Donor-specific Cell-free DNA as a Biomarker in Solid Organ Transplantation. A Systematic Review.
Simon Robert Knight, Adam Thorne, Maria Letizia Lo Faro. Transplantation 2019
86
18

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood.
H Christina Fan, Yair J Blumenfeld, Usha Chitkara, Louanne Hudgins, Stephen R Quake. Proc Natl Acad Sci U S A 2008
678
15

Quantification of transplant-derived circulating cell-free DNA in absence of a donor genotype.
Eilon Sharon, Hao Shi, Sandhya Kharbanda, Winston Koh, Lance R Martin, Kiran K Khush, Hannah Valantine, Jonathan K Pritchard, Iwijn De Vlaminck. PLoS Comput Biol 2017
33
45

Identification of tissue-specific cell death using methylation patterns of circulating DNA.
Roni Lehmann-Werman, Daniel Neiman, Hai Zemmour, Joshua Moss, Judith Magenheim, Adi Vaknin-Dembinsky, Sten Rubertsson, Bengt Nellgård, Kaj Blennow, Henrik Zetterberg,[...]. Proc Natl Acad Sci U S A 2016
314
15

Gene-expression profiling for rejection surveillance after cardiac transplantation.
Michael X Pham, Jeffrey J Teuteberg, Abdallah G Kfoury, Randall C Starling, Mario C Deng, Thomas P Cappola, Andrew Kao, Allen S Anderson, William G Cotts, Gregory A Ewald,[...]. N Engl J Med 2010
310
14

Rapid detection of donor cell free DNA in lung transplant recipients with rejections using donor-recipient HLA mismatch.
Jun Zou, Brian Duffy, Michael Slade, Andrew Lee Young, Nancy Steward, Ramsey Hachem, T Mohanakumar. Hum Immunol 2017
37
37

Plasma donor-derived cell-free DNA kinetics after kidney transplantation using a single tube multiplex PCR assay.
Els M Gielis, Charlie Beirnaert, Amélie Dendooven, Pieter Meysman, Kris Laukens, Joachim De Schrijver, Steven Van Laecke, Wim Van Biesen, Marie-Paule Emonds, Benedicte Y De Winter,[...]. PLoS One 2018
35
40

Late manifestation of alloantibody-associated injury and clinical pulmonary antibody-mediated rejection: Evidence from cell-free DNA analysis.
Sean Agbor-Enoh, Annette M Jackson, Ilker Tunc, Gerald J Berry, Adam Cochrane, David Grimm, Andrew Davis, Pali Shah, Anne W Brown, Yan Wang,[...]. J Heart Lung Transplant 2018
39
33

Noninvasive discrimination of rejection in cardiac allograft recipients using gene expression profiling.
M C Deng, H J Eisen, M R Mehra, M Billingham, C C Marboe, G Berry, J Kobashigawa, F L Johnson, R C Starling, S Murali,[...]. Am J Transplant 2006
352
13

Nuclear Acids In Human Blood Plasma.
P MANDEL, P METAIS. C R Seances Soc Biol Fil 1948
591
13

Comprehensive human cell-type methylation atlas reveals origins of circulating cell-free DNA in health and disease.
Joshua Moss, Judith Magenheim, Daniel Neiman, Hai Zemmour, Netanel Loyfer, Amit Korach, Yaacov Samet, Myriam Maoz, Henrik Druid, Peter Arner,[...]. Nat Commun 2018
250
13

Donor fraction cell-free DNA and rejection in adult and pediatric heart transplantation.
Marc E Richmond, Steven D Zangwill, Steven J Kindel, Shriprasad R Deshpande, Jacob N Schroder, David P Bichell, Kenneth R Knecht, William T Mahle, Mark A Wigger, Nunzio A Gaglianello,[...]. J Heart Lung Transplant 2020
32
40

Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients.
Peiyong Jiang, Carol W M Chan, K C Allen Chan, Suk Hang Cheng, John Wong, Vincent Wai-Sun Wong, Grace L H Wong, Stephen L Chan, Tony S K Mok, Henry L Y Chan,[...]. Proc Natl Acad Sci U S A 2015
362
12

Soluble donor DNA concentrations in recipient serum correlate with pancreas-kidney rejection.
Vijayakrishna K Gadi, J Lee Nelson, Nicholas D Boespflug, Katherine A Guthrie, Christian S Kuhr. Clin Chem 2006
54
22

Donor-derived cell-free DNA predicts allograft failure and mortality after lung transplantation.
Sean Agbor-Enoh, Yan Wang, Ilker Tunc, Moon Kyoo Jang, Andrew Davis, Iwijn De Vlaminck, Helen Luikart, Pali D Shah, Irina Timofte, Anne W Brown,[...]. EBioMedicine 2019
45
26

Concordance among pathologists in the second Cardiac Allograft Rejection Gene Expression Observational Study (CARGO II).
Maria G Crespo-Leiro, Andreas Zuckermann, Christoph Bara, Paul Mohacsi, Uwe Schulz, Andrew Boyle, Heather J Ross, Jayan Parameshwar, Michael Zakliczyński, Roberto Fiocchi,[...]. Transplantation 2012
83
14

Revision of the 1990 working formulation for the standardization of nomenclature in the diagnosis of heart rejection.
Susan Stewart, Gayle L Winters, Michael C Fishbein, Henry D Tazelaar, Jon Kobashigawa, Jacki Abrams, Claus B Andersen, Annalisa Angelini, Gerald J Berry, Margaret M Burke,[...]. J Heart Lung Transplant 2005
12

An Algorithm Measuring Donor Cell-Free DNA in Plasma of Cellular and Solid Organ Transplant Recipients That Does Not Require Donor or Recipient Genotyping.
Paul M K Gordon, Aneal Khan, Umair Sajid, Nicholas Chang, Varun Suresh, Leo Dimnik, Ryan E Lamont, Jillian S Parboosingh, Steven R Martin, Richard T Pon,[...]. Front Cardiovasc Med 2016
20
60

Diagnostic application of kidney allograft-derived absolute cell-free DNA levels during transplant dysfunction.
John B Whitlam, Ling Ling, Alison Skene, John Kanellis, Francseco L Ierino, Howard R Slater, Damien L Bruno, David A Power. Am J Transplant 2019
44
27

Donor-derived Cell-free DNA Identifies Antibody-mediated Rejection in Donor Specific Antibody Positive Kidney Transplant Recipients.
Stanley C Jordan, Suphamai Bunnapradist, Jonathan S Bromberg, Anthony J Langone, David Hiller, James P Yee, John J Sninsky, Robert N Woodward, Arthur J Matas. Transplant Direct 2018
57
21

Detection of circulating tumor DNA in early- and late-stage human malignancies.
Chetan Bettegowda, Mark Sausen, Rebecca J Leary, Isaac Kinde, Yuxuan Wang, Nishant Agrawal, Bjarne R Bartlett, Hao Wang, Brandon Luber, Rhoda M Alani,[...]. Sci Transl Med 2014
11

Graft-derived cell-free DNA as an early organ integrity biomarker after transplantation of a marginal HELLP syndrome donor liver.
Philipp Kanzow, Otto Kollmar, Ekkehard Schütz, Michael Oellerich, Jessica Schmitz, Julia Beck, Philip D Walson, Jan E Slotta. Transplantation 2014
25
44

Free DNA in the serum of cancer patients and the effect of therapy.
S A Leon, B Shapiro, D M Sklaroff, M J Yaros. Cancer Res 1977
11

Origin of plasma cell-free DNA after solid organ transplantation.
Yanni Y N Lui, Kam-Sang Woo, Angela Y M Wang, Chung-Kwong Yeung, Philip K T Li, Elaine Chau, Peter Ruygrok, Y M Dennis Lo. Clin Chem 2003
60
18

Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease.
Timothy A Blauwkamp, Simone Thair, Michael J Rosen, Lily Blair, Martin S Lindner, Igor D Vilfan, Trupti Kawli, Fred C Christians, Shivkumar Venkatasubrahmanyam, Gregory D Wall,[...]. Nat Microbiol 2019
235
11


DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells.
S Jahr, H Hentze, S Englisch, D Hardt, F O Fackelmayer, R D Hesch, R Knippers. Cancer Res 2001
10

An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage.
Aaron M Newman, Scott V Bratman, Jacqueline To, Jacob F Wynne, Neville C W Eclov, Leslie A Modlin, Chih Long Liu, Joel W Neal, Heather A Wakelee, Robert E Merritt,[...]. Nat Med 2014
10

Biological Variation of Donor-Derived Cell-Free DNA in Renal Transplant Recipients: Clinical Implications.
Jonathan S Bromberg, Daniel C Brennan, Emilio Poggio, Suphamai Bunnapradist, Anthony Langone, Puneet Sood, Arthur J Matas, Roslyn B Mannon, Shikha Mehta, Asif Sharfuddin,[...]. J Appl Lab Med 2017
30
33

Presence of fetal DNA in maternal plasma and serum.
Y M Lo, N Corbetta, P F Chamberlain, V Rai, I L Sargent, C W Redman, J S Wainscoat. Lancet 1997
10

The use of plasma donor-derived, cell-free DNA to monitor acute rejection after kidney transplantation.
Els M Gielis, Kristien J Ledeganck, Amélie Dendooven, Pieter Meysman, Charlie Beirnaert, Kris Laukens, Joachim De Schrijver, Steven Van Laecke, Wim Van Biesen, Marie-Paule Emonds,[...]. Nephrol Dial Transplant 2020
36
27


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.