A citation-based method for searching scientific literature

André Berndt, Philipp Schoenenberger, Joanna Mattis, Kay M Tye, Karl Deisseroth, Peter Hegemann, Thomas G Oertner. Proc Natl Acad Sci U S A 2011
Times Cited: 254







List of co-cited articles
762 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
39

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
35

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
892
34

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
424
28

Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
408
28

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
414
24


Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
426
22

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
278
19

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
338
19

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
19

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.
Georg Nagel, Martin Brauner, Jana F Liewald, Nona Adeishvili, Ernst Bamberg, Alexander Gottschalk. Curr Biol 2005
579
18

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
719
18

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
218
17

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
603
16

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
Sonja Kleinlogel, Katrin Feldbauer, Robert E Dempski, Heike Fotis, Phillip G Wood, Christian Bamann, Ernst Bamberg. Nat Neurosci 2011
250
16

Conversion of channelrhodopsin into a light-gated chloride channel.
Jonas Wietek, J Simon Wiegert, Nona Adeishvili, Franziska Schneider, Hiroshi Watanabe, Satoshi P Tsunoda, Arend Vogt, Marcus Elstner, Thomas G Oertner, Peter Hegemann. Science 2014
202
16

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.
Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
321
15

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
305
15

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
973
13

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
13

Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity.
Andre Berndt, Soo Yeun Lee, Jonas Wietek, Charu Ramakrishnan, Elizabeth E Steinberg, Asim J Rashid, Hoseok Kim, Sungmo Park, Adam Santoro, Paul W Frankland,[...]. Proc Natl Acad Sci U S A 2016
108
13


The form and function of channelrhodopsin.
Karl Deisseroth, Peter Hegemann. Science 2017
95
12

Structural insights into ion conduction by channelrhodopsin 2.
Oleksandr Volkov, Kirill Kovalev, Vitaly Polovinkin, Valentin Borshchevskiy, Christian Bamann, Roman Astashkin, Egor Marin, Alexander Popov, Taras Balandin, Dieter Willbold,[...]. Science 2017
71
16

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration.
Anding Bi, Jinjuan Cui, Yu-Ping Ma, Elena Olshevskaya, Mingliang Pu, Alexander M Dizhoor, Zhuo-Hua Pan. Neuron 2006
419
11

Biophysics of Channelrhodopsin.
Franziska Schneider, Christiane Grimm, Peter Hegemann. Annu Rev Biophys 2015
99
11

Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.
Tae-il Kim, Jordan G McCall, Yei Hwan Jung, Xian Huang, Edward R Siuda, Yuhang Li, Jizhou Song, Young Min Song, Hsuan An Pao, Rak-Hwan Kim,[...]. Science 2013
480
10

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
588
10

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
270
10

Color-tuned channelrhodopsins for multiwavelength optogenetics.
Matthias Prigge, Franziska Schneider, Satoshi P Tsunoda, Carrie Shilyansky, Jonas Wietek, Karl Deisseroth, Peter Hegemann. J Biol Chem 2012
106
10

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
383
10

Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond.
Christian Bamann, Ronnie Gueta, Sonja Kleinlogel, Georg Nagel, Ernst Bamberg. Biochemistry 2010
148
10

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
10

Optical deconstruction of parkinsonian neural circuitry.
Viviana Gradinaru, Murtaza Mogri, Kimberly R Thompson, Jaimie M Henderson, Karl Deisseroth. Science 2009
941
9

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.
Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
526
9

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
949
9

Optogenetics.
Karl Deisseroth. Nat Methods 2011
870
9

Modeling the Spatiotemporal Dynamics of Light and Heat Propagation for In Vivo Optogenetics.
Joseph M Stujenske, Timothy Spellman, Joshua A Gordon. Cell Rep 2015
158
9

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
424
9

Biophysical constraints of optogenetic inhibition at presynaptic terminals.
Mathias Mahn, Matthias Prigge, Shiri Ron, Rivka Levy, Ofer Yizhar. Nat Neurosci 2016
174
9

Optogenetic stimulation of the auditory pathway.
Victor H Hernandez, Anna Gehrt, Kirsten Reuter, Zhizi Jing, Marcus Jeschke, Alejandro Mendoza Schulz, Gerhard Hoch, Matthias Bartels, Gerhard Vogt, Carolyn W Garnham,[...]. J Clin Invest 2014
76
10

An improved chloride-conducting channelrhodopsin for light-induced inhibition of neuronal activity in vivo.
Jonas Wietek, Riccardo Beltramo, Massimo Scanziani, Peter Hegemann, Thomas G Oertner, J Simon Wiegert. Sci Rep 2015
58
13

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
468
8

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
8

Millisecond-timescale optical control of neural dynamics in the nonhuman primate brain.
Xue Han, Xiaofeng Qian, Jacob G Bernstein, Hui-Hui Zhou, Giovanni Talei Franzesi, Patrick Stern, Roderick T Bronson, Ann M Graybiel, Robert Desimone, Edward S Boyden. Neuron 2009
312
8

Channelrhodopsin-2-XXL, a powerful optogenetic tool for low-light applications.
Alexej Dawydow, Ronnie Gueta, Dmitrij Ljaschenko, Sybille Ullrich, Moritz Hermann, Nadine Ehmann, Shiqiang Gao, André Fiala, Tobias Langenhan, Georg Nagel,[...]. Proc Natl Acad Sci U S A 2014
87
9

Neural substrates of awakening probed with optogenetic control of hypocretin neurons.
Antoine R Adamantidis, Feng Zhang, Alexander M Aravanis, Karl Deisseroth, Luis de Lecea. Nature 2007
748
7


Targeting and readout strategies for fast optical neural control in vitro and in vivo.
Viviana Gradinaru, Kimberly R Thompson, Feng Zhang, Murtaza Mogri, Kenneth Kay, M Bret Schneider, Karl Deisseroth. J Neurosci 2007
301
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.