A citation-based method for searching scientific literature

Zahra Shajani, Michael T Sykes, James R Williamson. Annu Rev Biochem 2011
Times Cited: 284







List of co-cited articles
1015 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ribosome biogenesis and the translation process in Escherichia coli.
Magdalena Kaczanowska, Monica Rydén-Aulin. Microbiol Mol Biol Rev 2007
244
23

Structure and dynamics of bacterial ribosome biogenesis.
Joseph H Davis, James R Williamson. Philos Trans R Soc Lond B Biol Sci 2017
43
44

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori. Mol Syst Biol 2006
18

Modular Assembly of the Bacterial Large Ribosomal Subunit.
Joseph H Davis, Yong Zi Tan, Bridget Carragher, Clinton S Potter, Dmitry Lyumkis, James R Williamson. Cell 2016
75
24

Role of GTPases in bacterial ribosome assembly.
Robert A Britton. Annu Rev Microbiol 2009
102
16




An assembly landscape for the 30S ribosomal subunit.
Megan W T Talkington, Gary Siuzdak, James R Williamson. Nature 2005
195
11


Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
421
10

Ribosome. The structure of the human mitochondrial ribosome.
Alexey Amunts, Alan Brown, Jaan Toots, Sjors H W Scheres, V Ramakrishnan. Science 2015
270
10

Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA.
Keith Connolly, Jason P Rife, Gloria Culver. Mol Microbiol 2008
107
10

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
312
10

The assembly of prokaryotic ribosomes.
K H Nierhaus. Biochimie 1991
172
10


The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli.
Julie Charollais, Delphine Pflieger, Joëlle Vinh, Marc Dreyfus, Isabelle Iost. Mol Microbiol 2003
166
9

Crystal structure of the ribosome at 5.5 A resolution.
M M Yusupov, G Z Yusupova, A Baucom, K Lieberman, T N Earnest, J H Cate, H F Noller. Science 2001
9

Maturation and degradation of ribosomal RNA in bacteria.
Murray P Deutscher. Prog Mol Biol Transl Sci 2009
112
9

Structure of the 30S ribosomal subunit.
B T Wimberly, D E Brodersen, W M Clemons, R J Morgan-Warren, A P Carter, C Vonrhein, T Hartsch, V Ramakrishnan. Nature 2000
9

Conserved bacterial RNase YbeY plays key roles in 70S ribosome quality control and 16S rRNA maturation.
Asha Ivy Jacob, Caroline Köhrer, Bryan William Davies, Uttam Lal RajBhandary, Graham Charles Walker. Mol Cell 2013
89
10

Ribosome assembly coming into focus.
Sebastian Klinge, John L Woolford. Nat Rev Mol Cell Biol 2019
127
9

Visualizing ribosome biogenesis: parallel assembly pathways for the 30S subunit.
Anke M Mulder, Craig Yoshioka, Andrea H Beck, Anne E Bunner, Ronald A Milligan, Clinton S Potter, Bridget Carragher, James R Williamson. Science 2010
134
8

The weird and wonderful world of bacterial ribosome regulation.
Daniel N Wilson, Knud H Nierhaus. Crit Rev Biochem Mol Biol 2007
147
8

Structures of the human mitochondrial ribosome in native states of assembly.
Alan Brown, Sorbhi Rathore, Dari Kimanius, Shintaro Aibara, Xiao-Chen Bai, Joanna Rorbach, Alexey Amunts, V Ramakrishnan. Nat Struct Mol Biol 2017
78
10

Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome.
Basil J Greber, Philipp Bieri, Marc Leibundgut, Alexander Leitner, Ruedi Aebersold, Daniel Boehringer, Nenad Ban. Science 2015
238
8

Functional domains of the 50S subunit mature late in the assembly process.
Ahmad Jomaa, Nikhil Jain, Joseph H Davis, James R Williamson, Robert A Britton, Joaquin Ortega. Nucleic Acids Res 2014
41
19


The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
N Ban, P Nissen, J Hansen, P B Moore, T A Steitz. Science 2000
8

Appropriate maturation and folding of 16S rRNA during 30S subunit biogenesis are critical for translational fidelity.
Biswajoy Roy-Chaudhuri, Narayanaswamy Kirthi, Gloria M Culver. Proc Natl Acad Sci U S A 2010
39
20

In vivo X-ray footprinting of pre-30S ribosomes reveals chaperone-dependent remodeling of late assembly intermediates.
Sarah F Clatterbuck Soper, Romel P Dator, Patrick A Limbach, Sarah A Woodson. Mol Cell 2013
73
10

Binding properties of YjeQ (RsgA), RbfA, RimM and Era to assembly intermediates of the 30S subunit.
Brett Thurlow, Joseph H Davis, Vivian Leong, Trevor F Moraes, James R Williamson, Joaquin Ortega. Nucleic Acids Res 2016
21
38

Protein-guided RNA dynamics during early ribosome assembly.
Hajin Kim, Sanjaya C Abeysirigunawarden, Ke Chen, Megan Mayerle, Kaushik Ragunathan, Zaida Luthey-Schulten, Taekjip Ha, Sarah A Woodson. Nature 2014
94
8

YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit.
Xiaodan Ni, Joseph H Davis, Nikhil Jain, Aida Razi, Samir Benlekbir, Andrew G McArthur, John L Rubinstein, Robert A Britton, James R Williamson, Joaquin Ortega. Nucleic Acids Res 2016
18
44

The structure of the yeast mitochondrial ribosome.
Nirupa Desai, Alan Brown, Alexey Amunts, V Ramakrishnan. Science 2017
88
7

Structure of the large ribosomal subunit from human mitochondria.
Alan Brown, Alexey Amunts, Xiao-Chen Bai, Yoichiro Sugimoto, Patricia C Edwards, Garib Murshudov, Sjors H W Scheres, V Ramakrishnan. Science 2014
181
7

RsgA releases RbfA from 30S ribosome during a late stage of ribosome biosynthesis.
Simon Goto, Shingo Kato, Takatsugu Kimura, Akira Muto, Hyouta Himeno. EMBO J 2011
34
20


A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.
Bethany S Strunk, Megan N Novak, Crystal L Young, Katrin Karbstein. Cell 2012
170
7

RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket.
Jorge Pedro López-Alonso, Tatsuya Kaminishi, Takeshi Kikuchi, Yuya Hirata, Idoia Iturrioz, Neha Dhimole, Andreas Schedlbauer, Yoichi Hase, Simon Goto, Daisuke Kurita,[...]. Nucleic Acids Res 2017
15
46

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
169
7

Mitochondrial ribosome assembly in health and disease.
Dasmanthie De Silva, Ya-Ting Tu, Alexey Amunts, Flavia Fontanesi, Antoni Barrientos. Cell Cycle 2015
84
8

Structural and functional insights into the mode of action of a universally conserved Obg GTPase.
Boya Feng, Chandra Sekhar Mandava, Qiang Guo, Jie Wang, Wei Cao, Ningning Li, Yixiao Zhang, Yanqing Zhang, Zhixin Wang, Jiawei Wu,[...]. PLoS Biol 2014
72
9

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing.
Bryan W Davies, Caroline Köhrer, Asha I Jacob, Lyle A Simmons, Jianyu Zhu, Lourdes M Aleman, Uttam L Rajbhandary, Graham C Walker. Mol Microbiol 2010
73
9


Single methylation of 23S rRNA triggers late steps of 50S ribosomal subunit assembly.
Taiga Arai, Kensuke Ishiguro, Satoshi Kimura, Yuriko Sakaguchi, Takeo Suzuki, Tsutomu Suzuki. Proc Natl Acad Sci U S A 2015
28
25

Structural aspects of RbfA action during small ribosomal subunit assembly.
Partha P Datta, Daniel N Wilson, Masahito Kawazoe, Neil K Swami, Tatsuya Kaminishi, Manjuli R Sharma, Timothy M Booth, Chie Takemoto, Paola Fucini, Shigeyuki Yokoyama,[...]. Mol Cell 2007
63
11

Eukaryotic Ribosome Assembly.
Jochen Baßler, Ed Hurt. Annu Rev Biochem 2019
85
8


The complete structure of the large subunit of the mammalian mitochondrial ribosome.
Basil J Greber, Daniel Boehringer, Marc Leibundgut, Philipp Bieri, Alexander Leitner, Nikolaus Schmitz, Ruedi Aebersold, Nenad Ban. Nature 2014
168
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.