A citation-based method for searching scientific literature

Jimmy de Melo, Guang-Hua Peng, Shiming Chen, Seth Blackshaw. Development 2011
Times Cited: 32







List of co-cited articles
419 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A thyroid hormone receptor that is required for the development of green cone photoreceptors.
L Ng, J B Hurley, B Dierks, M Srinivas, C Saltó, B Vennström, T A Reh, D Forrest. Nat Genet 2001
383
37

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.
Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
402
37

Retinoid X receptor (gamma) is necessary to establish the S-opsin gradient in cone photoreceptors of the developing mouse retina.
Melanie R Roberts, Anita Hendrickson, Christopher R McGuire, Thomas A Reh. Invest Ophthalmol Vis Sci 2005
147
37


Nrl is required for rod photoreceptor development.
A J Mears, M Kondo, P K Swain, Y Takada, R A Bush, T L Saunders, P A Sieving, A Swaroop. Nat Genet 2001
658
34

Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
66
34

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
325
31


Foxn4 controls the genesis of amacrine and horizontal cells by retinal progenitors.
Shengguo Li, Zeqian Mo, Xuejie Yang, Sandy M Price, Michael M Shen, Mengqing Xiang. Neuron 2004
178
28

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
129
28


Activation of the blue opsin gene in cone photoreceptor development by retinoid-related orphan receptor beta.
Maya Srinivas, Lily Ng, Hong Liu, Li Jia, Douglas Forrest. Mol Endocrinol 2006
81
25


NeuroD factors regulate cell fate and neurite stratification in the developing retina.
Timothy J Cherry, Sui Wang, Ingo Bormuth, Markus Schwab, James Olson, Constance L Cepko. J Neurosci 2011
52
21

Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes.
S Chen, Q L Wang, Z Nie, H Sun, G Lennon, N G Copeland, D J Gilbert, N A Jenkins, D J Zack. Neuron 1997
538
21

Recruitment of Rod Photoreceptors from Short-Wavelength-Sensitive Cones during the Evolution of Nocturnal Vision in Mammals.
Jung-Woong Kim, Hyun-Jin Yang, Adam Phillip Oel, Matthew John Brooks, Li Jia, David Charles Plachetzki, Wei Li, William Ted Allison, Anand Swaroop. Dev Cell 2016
62
21

Prox1 function controls progenitor cell proliferation and horizontal cell genesis in the mammalian retina.
Michael A Dyer, Frederick J Livesey, Constance L Cepko, Guillermo Oliver. Nat Genet 2003
295
18

Ptf1a is essential for the differentiation of GABAergic and glycinergic amacrine cells and horizontal cells in the mouse retina.
Hassan Nakhai, Saadettin Sel, Jack Favor, Lidia Mendoza-Torres, Friedrich Paulsen, Gernot I W Duncker, Roland M Schmid. Development 2007
139
18

Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling.
Jeffrey M Trimarchi, Michael B Stadler, Botond Roska, Nathan Billings, Ben Sun, Brandon Bartch, Constance L Cepko. J Comp Neurol 2007
125
18

Pax6 is required for the multipotent state of retinal progenitor cells.
T Marquardt, R Ashery-Padan, N Andrejewski, R Scardigli, F Guillemot, P Gruss. Cell 2001
665
18

Ptf1a determines horizontal and amacrine cell fates during mouse retinal development.
Yoshio Fujitani, Shuko Fujitani, Huijun Luo, Feng Qiu, Jared Burlison, Qiaoming Long, Yoshiya Kawaguchi, Helena Edlund, Raymond J MacDonald, Takahisa Furukawa,[...]. Development 2006
166
18

Pias3-dependent SUMOylation directs rod photoreceptor development.
Akishi Onishi, Guang-Hua Peng, Chengda Hsu, Uel Alexis, Shiming Chen, Seth Blackshaw. Neuron 2009
88
18

Transformation of cone precursors to functional rod photoreceptors by bZIP transcription factor NRL.
Edwin C T Oh, Naheed Khan, Elena Novelli, Hemant Khanna, Enrica Strettoi, Anand Swaroop. Proc Natl Acad Sci U S A 2007
109
18

Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate.
N B Haider, S G Jacobson, A V Cideciyan, R Swiderski, L M Streb, C Searby, G Beck, R Hockey, D B Hanna, S Gorman,[...]. Nat Genet 2000
343
18

Retinoid-related orphan nuclear receptor RORbeta is an early-acting factor in rod photoreceptor development.
Li Jia, Edwin C T Oh, Lily Ng, Maya Srinivas, Matthew Brooks, Anand Swaroop, Douglas Forrest. Proc Natl Acad Sci U S A 2009
91
18


Making the gradient: thyroid hormone regulates cone opsin expression in the developing mouse retina.
Melanie R Roberts, Maya Srinivas, Douglas Forrest, Gabriella Morreale de Escobar, Thomas A Reh. Proc Natl Acad Sci U S A 2006
170
18

Pias3-dependent SUMOylation controls mammalian cone photoreceptor differentiation.
Akishi Onishi, Guang-Hua Peng, Shiming Chen, Seth Blackshaw. Nat Neurosci 2010
32
18

Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl.
Shigeo Yoshida, Alan J Mears, James S Friedman, Todd Carter, Shirley He, Edwin Oh, Yuezhou Jing, Rafal Farjo, Gilles Fleury, Carrolee Barlow,[...]. Hum Mol Genet 2004
130
18

Timing and topography of cell genesis in the rat retina.
David H Rapaport, Lily L Wong, Eric D Wood, Douglas Yasumura, Matthew M LaVail. J Comp Neurol 2004
265
18

Genomic analysis of mouse retinal development.
Seth Blackshaw, Sanjiv Harpavat, Jeff Trimarchi, Li Cai, Haiyan Huang, Winston P Kuo, Griffin Weber, Kyungjoon Lee, Rebecca E Fraioli, Seo-Hee Cho,[...]. PLoS Biol 2004
440
18

The cis-regulatory logic of the mammalian photoreceptor transcriptional network.
Timothy H-C Hsiau, Claudiu Diaconu, Connie A Myers, Jongwoo Lee, Constance L Cepko, Joseph C Corbo. PLoS One 2007
107
18

Onecut1 and Onecut2 redundantly regulate early retinal cell fates during development.
Darshan Sapkota, Hemabindu Chintala, Fuguo Wu, Steven J Fliesler, Zihua Hu, Xiuqian Mu. Proc Natl Acad Sci U S A 2014
53
18

Lim1 is essential for the correct laminar positioning of retinal horizontal cells.
Ross A Poché, Kin Ming Kwan, Mary A Raven, Yasuhide Furuta, Benjamin E Reese, Richard R Behringer. J Neurosci 2007
75
15

Vertebrate neural cell-fate determination: lessons from the retina.
F J Livesey, C L Cepko. Nat Rev Neurosci 2001
688
15


Transcriptional regulation of neural retina leucine zipper (Nrl), a photoreceptor cell fate determinant.
Cynthia L Montana, Karen A Lawrence, Natecia L Williams, Nicholas M Tran, Guang-Hua Peng, Shiming Chen, Joseph C Corbo. J Biol Chem 2011
32
15

The spatial patterning of mouse cone opsin expression is regulated by bone morphogenetic protein signaling through downstream effector COUP-TF nuclear receptors.
Shinya Satoh, Ke Tang, Atsumi Iida, Mariko Inoue, Tatsuhiko Kodama, Sophia Y Tsai, Ming-Jer Tsai, Yasuhide Furuta, Sumiko Watanabe. J Neurosci 2009
49
15


The orphan nuclear hormone receptor ERRbeta controls rod photoreceptor survival.
Akishi Onishi, Guang-Hua Peng, Erin M Poth, Daniel A Lee, Jichao Chen, Uel Alexis, Jimmy de Melo, Shiming Chen, Seth Blackshaw. Proc Natl Acad Sci U S A 2010
52
15

Rod differentiation factor NRL activates the expression of nuclear receptor NR2E3 to suppress the development of cone photoreceptors.
Edwin C T Oh, Hong Cheng, Hong Hao, Lin Jia, Naheed Wali Khan, Anand Swaroop. Brain Res 2008
83
15

Transcriptional regulation of rod photoreceptor homeostasis revealed by in vivo NRL targetome analysis.
Hong Hao, Douglas S Kim, Bernward Klocke, Kory R Johnson, Kairong Cui, Norimoto Gotoh, Chongzhi Zang, Janina Gregorski, Linn Gieser, Weiqun Peng,[...]. PLoS Genet 2012
73
15

Role of the Barhl2 homeobox gene in the specification of glycinergic amacrine cells.
Zeqian Mo, Shengguo Li, Xuejie Yang, Mengqing Xiang. Development 2004
79
15

ISL1 and BRN3B co-regulate the differentiation of murine retinal ganglion cells.
Ling Pan, Min Deng, Xiaoling Xie, Lin Gan. Development 2008
128
15

rax, Hes1, and notch1 promote the formation of Müller glia by postnatal retinal progenitor cells.
T Furukawa, S Mukherjee, Z Z Bao, E M Morrow, C L Cepko. Neuron 2000
381
15

Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor.
C L Freund, C Y Gregory-Evans, T Furukawa, M Papaioannou, J Looser, L Ploder, J Bellingham, D Ng, J A Herbrick, A Duncan,[...]. Cell 1997
435
15

Math5 is required for retinal ganglion cell and optic nerve formation.
N L Brown, S Patel, J Brzezinski, T Glaser. Development 2001
365
15





Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.