A citation-based method for searching scientific literature

Katrin Paeschke, John A Capra, Virginia A Zakian. Cell 2011
Times Cited: 371







List of co-cited articles
1539 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pif1 family helicases suppress genome instability at G-quadruplex motifs.
Katrin Paeschke, Matthew L Bochman, P Daniela Garcia, Petr Cejka, Katherine L Friedman, Stephen C Kowalczykowski, Virginia A Zakian. Nature 2013
286
47

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
42

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
38

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
518
38

G-quadruplex-induced instability during leading-strand replication.
Judith Lopes, Aurèle Piazza, Rodrigo Bermejo, Barry Kriegsman, Arianna Colosio, Marie-Paule Teulade-Fichou, Marco Foiani, Alain Nicolas. EMBO J 2011
203
35

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
33

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
336
32

The yeast Pif1 helicase prevents genomic instability caused by G-quadruplex-forming CEB1 sequences in vivo.
Cyril Ribeyre, Judith Lopes, Jean-Baptiste Boulé, Aurèle Piazza, Aurore Guédin, Virginia A Zakian, Jean-Louis Mergny, Alain Nicolas. PLoS Genet 2009
246
28

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.
Raphaël Rodriguez, Kyle M Miller, Josep V Forment, Charles R Bradshaw, Mehran Nikan, Sébastien Britton, Tobias Oelschlaegel, Blerta Xhemalce, Shankar Balasubramanian, Stephen P Jackson. Nat Chem Biol 2012
396
27

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
663
26

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
727
25

G-quadruplexes and helicases.
Oscar Mendoza, Anne Bourdoncle, Jean-Baptiste Boulé, Robert M Brosh, Jean-Louis Mergny. Nucleic Acids Res 2016
211
24

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
683
24

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
23

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
812
23

Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
995
21



DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
365
20


CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours.
Hong Xu, Marco Di Antonio, Steven McKinney, Veena Mathew, Brandon Ho, Nigel J O'Neil, Nancy Dos Santos, Jennifer Silvester, Vivien Wei, Jessica Garcia,[...]. Nat Commun 2017
196
20

Detection of G-quadruplex DNA in mammalian cells.
Alexander Henderson, Yuliang Wu, Yu Chuan Huang, Elizabeth A Chavez, Jesse Platt, F Brad Johnson, Robert M Brosh, Dipankar Sen, Peter M Lansdorp. Nucleic Acids Res 2014
280
20

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
995
20

G-quadruplex unwinding helicases and their function in vivo.
Markus Sauer, Katrin Paeschke. Biochem Soc Trans 2017
76
26

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
95
20

Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds.
Jutta Zimmer, Eliana M C Tacconi, Cecilia Folio, Sophie Badie, Manuela Porru, Kerstin Klare, Manuela Tumiati, Enni Markkanen, Swagata Halder, Anderson Ryan,[...]. Mol Cell 2016
108
18


Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
17

Periodic DNA patrolling underlies diverse functions of Pif1 on R-loops and G-rich DNA.
Ruobo Zhou, Jichuan Zhang, Matthew L Bochman, Virginia A Zakian, Taekjip Ha. Elife 2014
108
17

G-quadruplex structures: in vivo evidence and function.
Hans J Lipps, Daniela Rhodes. Trends Cell Biol 2009
533
17

G quadruplexes are genomewide targets of transcriptional helicases XPB and XPD.
Lucas T Gray, Aarthy C Vallur, Johanna Eddy, Nancy Maizels. Nat Chem Biol 2014
125
16

Disruption of dog-1 in Caenorhabditis elegans triggers deletions upstream of guanine-rich DNA.
Iris Cheung, Michael Schertzer, Ann Rose, Peter M Lansdorp. Nat Genet 2002
193
16

An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation.
Sunita Kumari, Anthony Bugaut, Julian L Huppert, Shankar Balasubramanian. Nat Chem Biol 2007
502
16

The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
150
16

Epigenetic instability due to defective replication of structured DNA.
Peter Sarkies, Charlie Reams, Laura J Simpson, Julian E Sale. Mol Cell 2010
179
15

Genetic instability triggered by G-quadruplex interacting Phen-DC compounds in Saccharomyces cerevisiae.
Aurèle Piazza, Jean-Baptiste Boulé, Judith Lopes, Katie Mingo, Eric Largy, Marie-Paule Teulade-Fichou, Alain Nicolas. Nucleic Acids Res 2010
109
15

In vitro generated antibodies specific for telomeric guanine-quadruplex DNA react with Stylonychia lemnae macronuclei.
C Schaffitzel, I Berger, J Postberg, J Hanes, H J Lipps, A Plückthun. Proc Natl Acad Sci U S A 2001
447
15

Re-evaluation of G-quadruplex propensity with G4Hunter.
Amina Bedrat, Laurent Lacroix, Jean-Louis Mergny. Nucleic Acids Res 2016
251
15

Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo.
Katrin Paeschke, Tomas Simonsson, Jan Postberg, Daniela Rhodes, Hans Joachim Lipps. Nat Struct Mol Biol 2005
407
15

Local epigenetic reprogramming induced by G-quadruplex ligands.
Guillaume Guilbaud, Pierre Murat, Bénédicte Recolin, Beth C Campbell, Ahmed Maiter, Julian E Sale, Shankar Balasubramanian. Nat Chem 2017
52
28

Unwinding the functions of the Pif1 family helicases.
Matthew L Bochman, Nasim Sabouri, Virginia A Zakian. DNA Repair (Amst) 2010
147
15

FANCJ coordinates two pathways that maintain epigenetic stability at G-quadruplex DNA.
Peter Sarkies, Pierre Murat, Lara G Phillips, K J Patel, Shankar Balasubramanian, Julian E Sale. Nucleic Acids Res 2012
139
14

RTEL1 dismantles T loops and counteracts telomeric G4-DNA to maintain telomere integrity.
Jean-Baptiste Vannier, Visnja Pavicic-Kaltenbrunner, Mark I R Petalcorin, Hao Ding, Simon J Boulton. Cell 2012
296
14

Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.
Emilie Besnard, Amélie Babled, Laure Lapasset, Ollivier Milhavet, Hugues Parrinello, Christelle Dantec, Jean-Michel Marin, Jean-Marc Lemaitre. Nat Struct Mol Biol 2012
241
14

FANCJ is a structure-specific DNA helicase associated with the maintenance of genomic G/C tracts.
Timothy B C London, Louise J Barber, Georgina Mosedale, Gavin P Kelly, Shankar Balasubramanian, Ian D Hickson, Simon J Boulton, Kevin Hiom. J Biol Chem 2008
161
14

BLM helicase suppresses recombination at G-quadruplex motifs in transcribed genes.
Niek van Wietmarschen, Sarra Merzouk, Nancy Halsema, Diana C J Spierings, Victor Guryev, Peter M Lansdorp. Nat Commun 2018
40
35


Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae.
Steve G Hershman, Qijun Chen, Julia Y Lee, Marina L Kozak, Peng Yue, Li-San Wang, F Brad Johnson. Nucleic Acids Res 2008
199
14

Telomeric G-quadruplexes are a substrate and site of localization for human telomerase.
Aaron L Moye, Karina C Porter, Scott B Cohen, Tram Phan, Katherine G Zyner, Natsuki Sasaki, George O Lovrecz, Jennifer L Beck, Tracy M Bryan. Nat Commun 2015
126
14

PIF1 family DNA helicases suppress R-loop mediated genome instability at tRNA genes.
Phong Lan Thao Tran, Thomas J Pohl, Chi-Fu Chen, Angela Chan, Sebastian Pott, Virginia A Zakian. Nat Commun 2017
57
24


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.