A citation-based method for searching scientific literature

Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
Times Cited: 936







List of co-cited articles
763 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
27

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
959
14


Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
12

Optogenetics.
Karl Deisseroth. Nat Methods 2011
858
12

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
862
12

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
592
10

Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
261
9

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
412
9

The microbial opsin family of optogenetic tools.
Feng Zhang, Johannes Vierock, Ofer Yizhar, Lief E Fenno, Satoshi Tsunoda, Arash Kianianmomeni, Matthias Prigge, Andre Berndt, John Cushman, Jürgen Polle,[...]. Cell 2011
298
9

A genetically encoded photoactivatable Rac controls the motility of living cells.
Yi I Wu, Daniel Frey, Oana I Lungu, Angelika Jaehrig, Ilme Schlichting, Brian Kuhlman, Klaus M Hahn. Nature 2009
717
9

DREADDs for Neuroscientists.
Bryan L Roth. Neuron 2016
574
8

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
406
8

Near-infrared deep brain stimulation via upconversion nanoparticle-mediated optogenetics.
Shuo Chen, Adam Z Weitemier, Xiao Zeng, Linmeng He, Xiyu Wang, Yanqiu Tao, Arthur J Y Huang, Yuki Hashimotodani, Masanobu Kano, Hirohide Iwasaki,[...]. Science 2018
319
8

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
301
7

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.
Feng Zhang, Matthias Prigge, Florent Beyrière, Satoshi P Tsunoda, Joanna Mattis, Ofer Yizhar, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2008
317
7

Closed-loop and activity-guided optogenetic control.
Logan Grosenick, James H Marshel, Karl Deisseroth. Neuron 2015
162
7

Next-generation optical technologies for illuminating genetically targeted brain circuits.
Karl Deisseroth, Guoping Feng, Ania K Majewska, Gero Miesenböck, Alice Ting, Mark J Schnitzer. J Neurosci 2006
378
7

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
7

Illuminating cell signalling with optogenetic tools.
Doug Tischer, Orion D Weiner. Nat Rev Mol Cell Biol 2014
212
7

Rapid blue-light-mediated induction of protein interactions in living cells.
Matthew J Kennedy, Robert M Hughes, Leslie A Peteya, Joel W Schwartz, Michael D Ehlers, Chandra L Tucker. Nat Methods 2010
615
7

Optogenetic control of intracellular signaling pathways.
Kai Zhang, Bianxiao Cui. Trends Biotechnol 2015
133
7

Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Oliver P Ernst, David T Lodowski, Marcus Elstner, Peter Hegemann, Leonid S Brown, Hideki Kandori. Chem Rev 2014
500
7

Closed-loop all-optical interrogation of neural circuits in vivo.
Zihui Zhang, Lloyd E Russell, Adam M Packer, Oliver M Gauld, Michael Häusser. Nat Methods 2018
44
15

Chemogenetic tools to interrogate brain functions.
Scott M Sternson, Bryan L Roth. Annu Rev Neurosci 2014
253
6

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
6

Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
402
6

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
6

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
422
6

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
6

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
419
6

Cortical layer-specific critical dynamics triggering perception.
James H Marshel, Yoon Seok Kim, Timothy A Machado, Sean Quirin, Brandon Benson, Jonathan Kadmon, Cephra Raja, Adelaida Chibukhchyan, Charu Ramakrishnan, Masatoshi Inoue,[...]. Science 2019
103
6

Optogenetics enables functional analysis of human embryonic stem cell-derived grafts in a Parkinson's disease model.
Julius A Steinbeck, Se Joon Choi, Ana Mrejeru, Yosif Ganat, Karl Deisseroth, David Sulzer, Eugene V Mosharov, Lorenz Studer. Nat Biotechnol 2015
164
5

Evolving the lock to fit the key to create a family of G protein-coupled receptors potently activated by an inert ligand.
Blaine N Armbruster, Xiang Li, Mark H Pausch, Stefan Herlitze, Bryan L Roth. Proc Natl Acad Sci U S A 2007
5

Chemogenetics revealed: DREADD occupancy and activation via converted clozapine.
Juan L Gomez, Jordi Bonaventura, Wojciech Lesniak, William B Mathews, Polina Sysa-Shah, Lionel A Rodriguez, Randall J Ellis, Christopher T Richie, Brandon K Harvey, Robert F Dannals,[...]. Science 2017
437
5

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
332
5

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
704
5

A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex.
Xue Han, Brian Y Chow, Huihui Zhou, Nathan C Klapoetke, Amy Chuong, Reza Rajimehr, Aimei Yang, Michael V Baratta, Jonathan Winkle, Robert Desimone,[...]. Front Syst Neurosci 2011
286
5

Targeted optogenetic stimulation and recording of neurons in vivo using cell-type-specific expression of Channelrhodopsin-2.
Jessica A Cardin, Marie Carlén, Konstantinos Meletis, Ulf Knoblich, Feng Zhang, Karl Deisseroth, Li-Huei Tsai, Christopher I Moore. Nat Protoc 2010
286
5

Spatiotemporal control of cell signalling using a light-switchable protein interaction.
Anselm Levskaya, Orion D Weiner, Wendell A Lim, Christopher A Voigt. Nature 2009
617
5

TULIPs: tunable, light-controlled interacting protein tags for cell biology.
Devin Strickland, Yuan Lin, Elizabeth Wagner, C Matthew Hope, Josiah Zayner, Chloe Antoniou, Tobin R Sosnick, Eric L Weiss, Michael Glotzer. Nat Methods 2012
294
5

A light-switchable gene promoter system.
Sae Shimizu-Sato, Enamul Huq, James M Tepperman, Peter H Quail. Nat Biotechnol 2002
380
5


Spatiotemporal control of fibroblast growth factor receptor signals by blue light.
Nury Kim, Jin Man Kim, Minji Lee, Cha Yeon Kim, Ki-Young Chang, Won Do Heo. Chem Biol 2014
105
5

Engineered pairs of distinct photoswitches for optogenetic control of cellular proteins.
Fuun Kawano, Hideyuki Suzuki, Akihiro Furuya, Moritoshi Sato. Nat Commun 2015
171
5

At Light Speed: Advances in Optogenetic Systems for Regulating Cell Signaling and Behavior.
Nicole A Repina, Alyssa Rosenbloom, Abhirup Mukherjee, David V Schaffer, Ravi S Kane. Annu Rev Chem Biomol Eng 2017
70
7

A LOV2 domain-based optogenetic tool to control protein degradation and cellular function.
Christian Renicke, Daniel Schuster, Svetlana Usherenko, Lars-Oliver Essen, Christof Taxis. Chem Biol 2013
145
5

Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
341
5

Targeting neurons and photons for optogenetics.
Adam M Packer, Botond Roska, Michael Häusser. Nat Neurosci 2013
174
5

Optogenetic pharmacology for control of native neuronal signaling proteins.
Richard H Kramer, Alexandre Mourot, Hillel Adesnik. Nat Neurosci 2013
129
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.