A citation-based method for searching scientific literature

Michael C Wu, Seunggeun Lee, Tianxi Cai, Yun Li, Michael Boehnke, Xihong Lin. Am J Hum Genet 2011
Times Cited: 1364







List of co-cited articles
510 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Rare-variant association analysis: study designs and statistical tests.
Seunggeung Lee, Gonçalo R Abecasis, Michael Boehnke, Xihong Lin. Am J Hum Genet 2014
492
23

Optimal unified approach for rare-variant association testing with application to small-sample case-control whole-exome sequencing studies.
Seunggeun Lee, Mary J Emond, Michael J Bamshad, Kathleen C Barnes, Mark J Rieder, Deborah A Nickerson, David C Christiani, Mark M Wurfel, Xihong Lin. Am J Hum Genet 2012
515
21

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
20



A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
17

Optimal tests for rare variant effects in sequencing association studies.
Seunggeun Lee, Michael C Wu, Xihong Lin. Biostatistics 2012
382
16

Sequence kernel association tests for the combined effect of rare and common variants.
Iuliana Ionita-Laza, Seunggeun Lee, Vlad Makarov, Joseph D Buxbaum, Xihong Lin. Am J Hum Genet 2013
268
14

A general framework for estimating the relative pathogenicity of human genetic variants.
Martin Kircher, Daniela M Witten, Preti Jain, Brian J O'Roak, Gregory M Cooper, Jay Shendure. Nat Genet 2014
13

Finding the missing heritability of complex diseases.
Teri A Manolio, Francis S Collins, Nancy J Cox, David B Goldstein, Lucia A Hindorff, David J Hunter, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti,[...]. Nature 2009
12

Powerful SNP-set analysis for case-control genome-wide association studies.
Michael C Wu, Peter Kraft, Michael P Epstein, Deanne M Taylor, Stephen J Chanock, David J Hunter, Xihong Lin. Am J Hum Genet 2010
374
11

General framework for meta-analysis of rare variants in sequencing association studies.
Seunggeun Lee, Tanya M Teslovich, Michael Boehnke, Xihong Lin. Am J Hum Genet 2013
129
11

10 Years of GWAS Discovery: Biology, Function, and Translation.
Peter M Visscher, Naomi R Wray, Qian Zhang, Pamela Sklar, Mark I McCarthy, Matthew A Brown, Jian Yang. Am J Hum Genet 2017
11

Integrative approaches for large-scale transcriptome-wide association studies.
Alexander Gusev, Arthur Ko, Huwenbo Shi, Gaurav Bhatia, Wonil Chung, Brenda W J H Penninx, Rick Jansen, Eco J C de Geus, Dorret I Boomsma, Fred A Wright,[...]. Nat Genet 2016
585
11

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
10

Genetic effects on gene expression across human tissues.
Alexis Battle, Christopher D Brown, Barbara E Engelhardt, Stephen B Montgomery. Nature 2017
10

The Ensembl Variant Effect Predictor.
William McLaren, Laurent Gil, Sarah E Hunt, Harpreet Singh Riat, Graham R S Ritchie, Anja Thormann, Paul Flicek, Fiona Cunningham. Genome Biol 2016
10

GCTA: a tool for genome-wide complex trait analysis.
Jian Yang, S Hong Lee, Michael E Goddard, Peter M Visscher. Am J Hum Genet 2011
9

A unified mixed-effects model for rare-variant association in sequencing studies.
Jianping Sun, Yingye Zheng, Li Hsu. Genet Epidemiol 2013
72
12


ACAT: A Fast and Powerful p Value Combination Method for Rare-Variant Analysis in Sequencing Studies.
Yaowu Liu, Sixing Chen, Zilin Li, Alanna C Morrison, Eric Boerwinkle, Xihong Lin. Am J Hum Genet 2019
46
19

Control for Population Structure and Relatedness for Binary Traits in Genetic Association Studies via Logistic Mixed Models.
Han Chen, Chaolong Wang, Matthew P Conomos, Adrienne M Stilp, Zilin Li, Tamar Sofer, Adam A Szpiro, Wei Chen, John M Brehm, Juan C Celedón,[...]. Am J Hum Genet 2016
162
8

A gene-based association method for mapping traits using reference transcriptome data.
Eric R Gamazon, Heather E Wheeler, Kaanan P Shah, Sahar V Mozaffari, Keston Aquino-Michaels, Robert J Carroll, Anne E Eyler, Joshua C Denny, Dan L Nicolae, Nancy J Cox,[...]. Nat Genet 2015
616
8

Testing for an unusual distribution of rare variants.
Benjamin M Neale, Manuel A Rivas, Benjamin F Voight, David Altshuler, Bernie Devlin, Marju Orho-Melander, Sekar Kathiresan, Shaun M Purcell, Kathryn Roeder, Mark J Daly. PLoS Genet 2011
416
8


Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies.
Wei Zhou, Jonas B Nielsen, Lars G Fritsche, Rounak Dey, Maiken E Gabrielsen, Brooke N Wolford, Jonathon LeFaive, Peter VandeHaar, Sarah A Gagliano, Aliya Gifford,[...]. Nat Genet 2018
215
8

Variance component model to account for sample structure in genome-wide association studies.
Hyun Min Kang, Jae Hoon Sul, Susan K Service, Noah A Zaitlen, Sit-Yee Kong, Nelson B Freimer, Chiara Sabatti, Eleazar Eskin. Nat Genet 2010
8


The UK Biobank resource with deep phenotyping and genomic data.
Clare Bycroft, Colin Freeman, Desislava Petkova, Gavin Band, Lloyd T Elliott, Kevin Sharp, Allan Motyer, Damjan Vukcevic, Olivier Delaneau, Jared O'Connell,[...]. Nature 2018
8

A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
7

Sequence kernel association test for quantitative traits in family samples.
Han Chen, James B Meigs, Josée Dupuis. Genet Epidemiol 2013
155
7

Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets.
Zhihong Zhu, Futao Zhang, Han Hu, Andrew Bakshi, Matthew R Robinson, Joseph E Powell, Grant W Montgomery, Michael E Goddard, Naomi R Wray, Peter M Visscher,[...]. Nat Genet 2016
674
7

Genome-wide meta-analysis identifies new loci and functional pathways influencing Alzheimer's disease risk.
Iris E Jansen, Jeanne E Savage, Kyoko Watanabe, Julien Bryois, Dylan M Williams, Stacy Steinberg, Julia Sealock, Ida K Karlsson, Sara Hägg, Lavinia Athanasiu,[...]. Nat Genet 2019
540
7


ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
7

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.
Annalisa Buniello, Jacqueline A L MacArthur, Maria Cerezo, Laura W Harris, James Hayhurst, Cinzia Malangone, Aoife McMahon, Joannella Morales, Edward Mountjoy, Elliot Sollis,[...]. Nucleic Acids Res 2019
926
7

An Expanded View of Complex Traits: From Polygenic to Omnigenic.
Evan A Boyle, Yang I Li, Jonathan K Pritchard. Cell 2017
6

Pooled association tests for rare variants in exon-resequencing studies.
Alkes L Price, Gregory V Kryukov, Paul I W de Bakker, Shaun M Purcell, Jeff Staples, Lee-Jen Wei, Shamil R Sunyaev. Am J Hum Genet 2010
553
6

Robust relationship inference in genome-wide association studies.
Ani Manichaikul, Josyf C Mychaleckyj, Stephen S Rich, Kathy Daly, Michèle Sale, Wei-Min Chen. Bioinformatics 2010
906
6

Statistical analysis strategies for association studies involving rare variants.
Vikas Bansal, Ondrej Libiger, Ali Torkamani, Nicholas J Schork. Nat Rev Genet 2010
320
6


Efficient Variant Set Mixed Model Association Tests for Continuous and Binary Traits in Large-Scale Whole-Genome Sequencing Studies.
Han Chen, Jennifer E Huffman, Jennifer A Brody, Chaolong Wang, Seunggeun Lee, Zilin Li, Stephanie M Gogarten, Tamar Sofer, Lawrence F Bielak, Joshua C Bis,[...]. Am J Hum Genet 2019
28
21

UK Biobank Whole-Exome Sequence Binary Phenome Analysis with Robust Region-Based Rare-Variant Test.
Zhangchen Zhao, Wenjian Bi, Wei Zhou, Peter VandeHaar, Lars G Fritsche, Seunggeun Lee. Am J Hum Genet 2020
15
40

Opportunities and challenges for transcriptome-wide association studies.
Michael Wainberg, Nasa Sinnott-Armstrong, Nicholas Mancuso, Alvaro N Barbeira, David A Knowles, David Golan, Raili Ermel, Arno Ruusalepp, Thomas Quertermous, Ke Hao,[...]. Nat Genet 2019
179
6

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics.
Alvaro N Barbeira, Scott P Dickinson, Rodrigo Bonazzola, Jiamao Zheng, Heather E Wheeler, Jason M Torres, Eric S Torstenson, Kaanan P Shah, Tzintzuni Garcia, Todd L Edwards,[...]. Nat Commun 2018
259
6

Principal components analysis corrects for stratification in genome-wide association studies.
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
6

CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
873
6

FaST linear mixed models for genome-wide association studies.
Christoph Lippert, Jennifer Listgarten, Ying Liu, Carl M Kadie, Robert I Davidson, David Heckerman. Nat Methods 2011
544
6

Missing heritability and strategies for finding the underlying causes of complex disease.
Evan E Eichler, Jonathan Flint, Greg Gibson, Augustine Kong, Suzanne M Leal, Jason H Moore, Joseph H Nadeau. Nat Rev Genet 2010
5

The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
Jacqueline MacArthur, Emily Bowler, Maria Cerezo, Laurent Gil, Peggy Hall, Emma Hastings, Heather Junkins, Aoife McMahon, Annalisa Milano, Joannella Morales,[...]. Nucleic Acids Res 2017
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.