A citation-based method for searching scientific literature

Jeffry D Sander, Lindsay Cade, Cyd Khayter, Deepak Reyon, Randall T Peterson, J Keith Joung, Jing-Ruey J Yeh. Nat Biotechnol 2011
Times Cited: 409







List of co-cited articles
1007 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
37

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
24

Heritable gene targeting in zebrafish using customized TALENs.
Peng Huang, An Xiao, Mingguo Zhou, Zuoyan Zhu, Shuo Lin, Bo Zhang. Nat Biotechnol 2011
466
22

Breaking the code of DNA binding specificity of TAL-type III effectors.
Jens Boch, Heidi Scholze, Sebastian Schornack, Angelika Landgraf, Simone Hahn, Sabine Kay, Thomas Lahaye, Anja Nickstadt, Ulla Bonas. Science 2009
20

Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.
Yannick Doyon, Jasmine M McCammon, Jeffrey C Miller, Farhoud Faraji, Catherine Ngo, George E Katibah, Rainier Amora, Toby D Hocking, Lei Zhang, Edward J Rebar,[...]. Nat Biotechnol 2008
595
20

A TALE nuclease architecture for efficient genome editing.
Jeffrey C Miller, Siyuan Tan, Guijuan Qiao, Kyle A Barlow, Jianbin Wang, Danny F Xia, Xiangdong Meng, David E Paschon, Elo Leung, Sarah J Hinkley,[...]. Nat Biotechnol 2011
19

A simple cipher governs DNA recognition by TAL effectors.
Matthew J Moscou, Adam J Bogdanove. Science 2009
18

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
18

Genetic engineering of human pluripotent cells using TALE nucleases.
Dirk Hockemeyer, Haoyi Wang, Samira Kiani, Christine S Lai, Qing Gao, John P Cassady, Gregory J Cost, Lei Zhang, Yolanda Santiago, Jeffrey C Miller,[...]. Nat Biotechnol 2011
795
17

Genetic compensation induced by deleterious mutations but not gene knockdowns.
Andrea Rossi, Zacharias Kontarakis, Claudia Gerri, Hendrik Nolte, Soraya Hölper, Marcus Krüger, Didier Y R Stainier. Nature 2015
654
17

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
16

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.
Tomas Cermak, Erin L Doyle, Michelle Christian, Li Wang, Yong Zhang, Clarice Schmidt, Joshua A Baller, Nikunj V Somia, Adam J Bogdanove, Daniel F Voytas. Nucleic Acids Res 2011
15

Targeting DNA double-strand breaks with TAL effector nucleases.
Michelle Christian, Tomas Cermak, Erin L Doyle, Clarice Schmidt, Feng Zhang, Aaron Hummel, Adam J Bogdanove, Daniel F Voytas. Genetics 2010
15

ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.
Thomas Gaj, Charles A Gersbach, Carlos F Barbas. Trends Biotechnol 2013
15

Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
459
14

Effective targeted gene 'knockdown' in zebrafish.
A Nasevicius, S C Ekker. Nat Genet 2000
14

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
13

Xanthomonas AvrBs3 family-type III effectors: discovery and function.
Jens Boch, Ulla Bonas. Annu Rev Phytopathol 2010
502
12

FLASH assembly of TALENs for high-throughput genome editing.
Deepak Reyon, Shengdar Q Tsai, Cyd Khayter, Jennifer A Foden, Jeffry D Sander, J Keith Joung. Nat Biotechnol 2012
626
12

Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair.
Thomas O Auer, Karine Duroure, Anne De Cian, Jean-Paul Concordet, Filippo Del Bene. Genome Res 2014
375
12

Knockout rats generated by embryo microinjection of TALENs.
Laurent Tesson, Claire Usal, Séverine Ménoret, Elo Leung, Brett J Niles, Séverine Remy, Yolanda Santiago, Anna I Vincent, Xiangdong Meng, Lei Zhang,[...]. Nat Biotechnol 2011
416
12

Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases.
Xiangdong Meng, Marcus B Noyes, Lihua J Zhu, Nathan D Lawson, Scot A Wolfe. Nat Biotechnol 2008
531
12

The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio.
P Haffter, M Granato, M Brand, M C Mullins, M Hammerschmidt, D A Kane, J Odenthal, F J van Eeden, Y J Jiang, C P Heisenberg,[...]. Development 1996
11

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
11

In vivo genome editing using a high-efficiency TALEN system.
Victoria M Bedell, Ying Wang, Jarryd M Campbell, Tanya L Poshusta, Colby G Starker, Randall G Krug, Wenfang Tan, Sumedha G Penheiter, Alvin C Ma, Anskar Y H Leung,[...]. Nature 2012
631
10

A genetic screen for mutations affecting embryogenesis in zebrafish.
W Driever, L Solnica-Krezel, A F Schier, S C Neuhauss, J Malicki, D L Stemple, D Y Stainier, F Zwartkruis, S Abdelilah, Z Rangini,[...]. Development 1996
921
10

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
722
10

Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
10

Genome editing. The new frontier of genome engineering with CRISPR-Cas9.
Jennifer A Doudna, Emmanuelle Charpentier. Science 2014
9

High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells.
Yanfang Fu, Jennifer A Foden, Cyd Khayter, Morgan L Maeder, Deepak Reyon, J Keith Joung, Jeffry D Sander. Nat Biotechnol 2013
9

A systematic genome-wide analysis of zebrafish protein-coding gene function.
Ross N W Kettleborough, Elisabeth M Busch-Nentwich, Steven A Harvey, Christopher M Dooley, Ewart de Bruijn, Freek van Eeden, Ian Sealy, Richard J White, Colin Herd, Isaac J Nijman,[...]. Nature 2013
349
9

Efficient CRISPR/Cas9 genome editing with low off-target effects in zebrafish.
Alexander Hruscha, Peter Krawitz, Alexandra Rechenberg, Verena Heinrich, Jochen Hecht, Christian Haass, Bettina Schmid. Development 2013
290
9

A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.
Julien Ablain, Ellen M Durand, Song Yang, Yi Zhou, Leonard I Zon. Dev Cell 2015
208
9

Targeted genome editing across species using ZFNs and TALENs.
Andrew J Wood, Te-Wen Lo, Bryan Zeitler, Catherine S Pickle, Edward J Ralston, Andrew H Lee, Rainier Amora, Jeffrey C Miller, Elo Leung, Xiangdong Meng,[...]. Science 2011
416
9

Genome editing with engineered zinc finger nucleases.
Fyodor D Urnov, Edward J Rebar, Michael C Holmes, H Steve Zhang, Philip D Gregory. Nat Rev Genet 2010
8

One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering.
Haoyi Wang, Hui Yang, Chikdu S Shivalila, Meelad M Dawlaty, Albert W Cheng, Feng Zhang, Rudolf Jaenisch. Cell 2013
8

Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain.
Y G Kim, J Cha, S Chandrasegaran. Proc Natl Acad Sci U S A 1996
8

A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity.
Claudio Mussolino, Robert Morbitzer, Fabienne Lütge, Nadine Dannemann, Thomas Lahaye, Toni Cathomen. Nucleic Acids Res 2011
481
8

Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos.
Nannan Chang, Changhong Sun, Lu Gao, Dan Zhu, Xiufei Xu, Xiaojun Zhu, Jing-Wei Xiong, Jianzhong Jeff Xi. Cell Res 2013
497
7

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
7

Myc-induced T cell leukemia in transgenic zebrafish.
David M Langenau, David Traver, Adolfo A Ferrando, Jeffery L Kutok, Jon C Aster, John P Kanki, Shuo Lin, Ed Prochownik, Nikolaus S Trede, Leonard I Zon,[...]. Science 2003
372
7

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
691
7

Precise Editing of the Zebrafish Genome Made Simple and Efficient.
Kazuyuki Hoshijima, Michael J Jurynec, David Jonah Grunwald. Dev Cell 2016
100
7

Heritable and precise zebrafish genome editing using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Prakriti Kaini, Jeffry D Sander, J Keith Joung, Randall T Peterson, Jing-Ruey Joanna Yeh. PLoS One 2013
240
7

Genetic compensation triggered by mutant mRNA degradation.
Mohamed A El-Brolosy, Zacharias Kontarakis, Andrea Rossi, Carsten Kuenne, Stefan Günther, Nana Fukuda, Khrievono Kikhi, Giulia L M Boezio, Carter M Takacs, Shih-Lei Lai,[...]. Nature 2019
310
7

TALENs: a widely applicable technology for targeted genome editing.
J Keith Joung, Jeffry D Sander. Nat Rev Mol Cell Biol 2013
786
6


CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.
Luke A Gilbert, Matthew H Larson, Leonardo Morsut, Zairan Liu, Gloria A Brar, Sandra E Torres, Noam Stern-Ginossar, Onn Brandman, Evan H Whitehead, Jennifer A Doudna,[...]. Cell 2013
6

Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.
Morgan L Maeder, Stacey Thibodeau-Beganny, Anna Osiak, David A Wright, Reshma M Anthony, Magdalena Eichtinger, Tao Jiang, Jonathan E Foley, Ronnie J Winfrey, Jeffrey A Townsend,[...]. Mol Cell 2008
470
6

Zebrafish behavioral profiling links drugs to biological targets and rest/wake regulation.
Jason Rihel, David A Prober, Anthony Arvanites, Kelvin Lam, Steven Zimmerman, Sumin Jang, Stephen J Haggarty, David Kokel, Lee L Rubin, Randall T Peterson,[...]. Science 2010
442
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.