A citation-based method for searching scientific literature

Lea A Medeiros, Lucas M Dennis, Mark E Gill, Hristo Houbaviy, Styliani Markoulaki, Dongdong Fu, Amy C White, Oktay Kirak, Phillip A Sharp, David C Page, Rudolf Jaenisch. Proc Natl Acad Sci U S A 2011
Times Cited: 119







List of co-cited articles
1361 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation.
Yangming Wang, Scott Baskerville, Archana Shenoy, Joshua E Babiarz, Lauren Baehner, Robert Blelloch. Nat Genet 2008
498
29

Dicer is essential for mouse development.
Emily Bernstein, Sang Yong Kim, Michelle A Carmell, Elizabeth P Murchison, Heather Alcorn, Mamie Z Li, Alea A Mills, Stephen J Elledge, Kathryn V Anderson, Gregory J Hannon. Nat Genet 2003
27

Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells.
Alexander Marson, Stuart S Levine, Megan F Cole, Garrett M Frampton, Tobias Brambrink, Sarah Johnstone, Matthew G Guenther, Wendy K Johnston, Marius Wernig, Jamie Newman,[...]. Cell 2008
26

Multiple targets of miR-302 and miR-372 promote reprogramming of human fibroblasts to induced pluripotent stem cells.
Deepa Subramanyam, Samy Lamouille, Robert L Judson, Jason Y Liu, Nathan Bucay, Rik Derynck, Robert Blelloch. Nat Biotechnol 2011
431
25



DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal.
Yangming Wang, Rostislav Medvid, Collin Melton, Rudolf Jaenisch, Robert Blelloch. Nat Genet 2007
737
23

Maternal microRNAs are essential for mouse zygotic development.
Fuchou Tang, Masahiro Kaneda, Dónal O'Carroll, Petra Hajkova, Sheila C Barton, Y Andrew Sun, Caroline Lee, Alexander Tarakhovsky, Kaiqin Lao, M Azim Surani. Genes Dev 2007
411
22

Embryonic stem cell-specific MicroRNAs.
Hristo B Houbaviy, Michael F Murray, Phillip A Sharp. Dev Cell 2003
850
22

Human embryonic stem cells express a unique set of microRNAs.
Mi-Ra Suh, Yoontae Lee, Jung Yeon Kim, Soo-Kyoung Kim, Sung-Hwan Moon, Ji Yeon Lee, Kwang-Yul Cha, Hyung Min Chung, Hyun Soo Yoon, Shin Yong Moon,[...]. Dev Biol 2004
730
18


MicroRNA biogenesis is required for mouse primordial germ cell development and spermatogenesis.
Katsuhiko Hayashi, Susana M Chuva de Sousa Lopes, Masahiro Kaneda, Fuchou Tang, Petra Hajkova, Kaiqin Lao, Donal O'Carroll, Partha P Das, Alexander Tarakhovsky, Eric A Miska,[...]. PLoS One 2008
340
17

Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs.
Antonio J Giraldez, Yuichiro Mishima, Jason Rihel, Russell J Grocock, Stijn Van Dongen, Kunio Inoue, Anton J Enright, Alexander F Schier. Science 2006
17


A latent pro-survival function for the mir-290-295 cluster in mouse embryonic stem cells.
Grace X Y Zheng, Arvind Ravi, J Mauro Calabrese, Lea A Medeiros, Oktay Kirak, Lucas M Dennis, Rudolf Jaenisch, Christopher B Burge, Phillip A Sharp. PLoS Genet 2011
82
19

Opposing microRNA families regulate self-renewal in mouse embryonic stem cells.
Collin Melton, Robert L Judson, Robert Blelloch. Nature 2010
519
15

Critical roles for Dicer in the female germline.
Elizabeth P Murchison, Paula Stein, Zhenyu Xuan, Hua Pan, Michael Q Zhang, Richard M Schultz, Gregory J Hannon. Genes Dev 2007
370
14

MicroRNA function is globally suppressed in mouse oocytes and early embryos.
Nayoung Suh, Lauren Baehner, Felix Moltzahn, Collin Melton, Archana Shenoy, Jing Chen, Robert Blelloch. Curr Biol 2010
295
14

MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells.
Lasse Sinkkonen, Tabea Hugenschmidt, Philipp Berninger, Dimos Gaidatzis, Fabio Mohn, Caroline G Artus-Revel, Mihaela Zavolan, Petr Svoboda, Witold Filipowicz. Nat Struct Mol Biol 2008
356
14

Embryonic stem cell-specific microRNAs promote induced pluripotency.
Robert L Judson, Joshua E Babiarz, Monica Venere, Robert Blelloch. Nat Biotechnol 2009
516
14

A mammalian microRNA expression atlas based on small RNA library sequencing.
Pablo Landgraf, Mirabela Rusu, Robert Sheridan, Alain Sewer, Nicola Iovino, Alexei Aravin, Sébastien Pfeffer, Amanda Rice, Alice O Kamphorst, Markus Landthaler,[...]. Cell 2007
13


Expression analysis of regulatory microRNAs in bovine cumulus oocyte complex and preimplantation embryos.
W S Abd El Naby, T H Hagos, M M Hossain, D Salilew-Wondim, A Y Gad, F Rings, M U Cinar, E Tholen, C Looft, K Schellander,[...]. Zygote 2013
79
15

Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.
Frederick Anokye-Danso, Chinmay M Trivedi, Denise Juhr, Mudit Gupta, Zheng Cui, Ying Tian, Yuzhen Zhang, Wenli Yang, Peter J Gruber, Jonathan A Epstein,[...]. Cell Stem Cell 2011
845
12

Selective blockade of microRNA processing by Lin28.
Srinivas R Viswanathan, George Q Daley, Richard I Gregory. Science 2008
12

Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing.
Chryssa Kanellopoulou, Stefan A Muljo, Andrew L Kung, Shridar Ganesan, Ronny Drapkin, Thomas Jenuwein, David M Livingston, Klaus Rajewsky. Genes Dev 2005
979
12


The functions of animal microRNAs.
Victor Ambros. Nature 2004
11

Targeted deletion reveals essential and overlapping functions of the miR-17 through 92 family of miRNA clusters.
Andrea Ventura, Amanda G Young, Monte M Winslow, Laura Lintault, Alex Meissner, Stefan J Erkeland, Jamie Newman, Roderick T Bronson, Denise Crowley, James R Stone,[...]. Cell 2008
11

Characterization of a highly variable eutherian microRNA gene.
Hristo B Houbaviy, Lucas Dennis, Rudolf Jaenisch, Phillip A Sharp. RNA 2005
111
11

MicroRNA expression in the human blastocyst.
Evan M Rosenbluth, Dawne N Shelton, Amy E T Sparks, Eric Devor, Lane Christenson, Bradley J Van Voorhis. Fertil Steril 2013
63
17

miR-302 Is Required for Timing of Neural Differentiation, Neural Tube Closure, and Embryonic Viability.
Ronald J Parchem, Nicole Moore, Jennifer L Fish, Jacqueline G Parchem, Tarcio T Braga, Archana Shenoy, Michael C Oldham, John L R Rubenstein, Richard A Schneider, Robert Blelloch. Cell Rep 2015
59
18

The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.
B J Reinhart, F J Slack, M Basson, A E Pasquinelli, J C Bettinger, A E Rougvie, H R Horvitz, G Ruvkun. Nature 2000
10

A role for Lin28 in primordial germ-cell development and germ-cell malignancy.
Jason A West, Srinivas R Viswanathan, Akiko Yabuuchi, Kerianne Cunniff, Ayumu Takeuchi, In-Hyun Park, Julia E Sero, Hao Zhu, Antonio Perez-Atayde, A Lindsay Frazier,[...]. Nature 2009
287
10


Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells.
Deborah A Greer Card, Pratibha B Hebbar, Leping Li, Kevin W Trotter, Yoshihiro Komatsu, Yuji Mishina, Trevor K Archer. Mol Cell Biol 2008
391
10

Reprogramming of mouse and human cells to pluripotency using mature microRNAs.
Norikatsu Miyoshi, Hideshi Ishii, Hiroaki Nagano, Naotsugu Haraguchi, Dyah Laksmi Dewi, Yoshihiro Kano, Shinpei Nishikawa, Masahiro Tanemura, Koshi Mimori, Fumiaki Tanaka,[...]. Cell Stem Cell 2011
543
10

Characterization of Dicer-deficient murine embryonic stem cells.
Elizabeth P Murchison, Janet F Partridge, Oliver H Tam, Sihem Cheloufi, Gregory J Hannon. Proc Natl Acad Sci U S A 2005
624
10

Most mammalian mRNAs are conserved targets of microRNAs.
Robin C Friedman, Kyle Kai-How Farh, Christopher B Burge, David P Bartel. Genome Res 2009
10


Regulation of microRNA biogenesis.
Minju Ha, V Narry Kim. Nat Rev Mol Cell Biol 2014
10

Deletion of Dicer in somatic cells of the female reproductive tract causes sterility.
Ankur K Nagaraja, Claudia Andreu-Vieyra, Heather L Franco, Lang Ma, Ruihong Chen, Derek Y Han, Huifeng Zhu, Julio E Agno, Preethi H Gunaratne, Francesco J DeMayo,[...]. Mol Endocrinol 2008
209
9

Dicer1 is essential for female fertility and normal development of the female reproductive system.
Xiaoman Hong, Lacey J Luense, Lynda K McGinnis, Warren B Nothnick, Lane K Christenson. Endocrinology 2008
171
9

MicroRNA genes are transcribed by RNA polymerase II.
Yoontae Lee, Minju Kim, Jinju Han, Kyu-Hyun Yeom, Sanghyuk Lee, Sung Hee Baek, V Narry Kim. EMBO J 2004
9

Identification of microRNAs controlling human ovarian cell steroidogenesis via a genome-scale screen.
Alexander V Sirotkin, Dmitriy Ovcharenko, Roland Grossmann, Marcela Lauková, Milos Mlyncek. J Cell Physiol 2009
154
9

Potential role of miR-29b in modulation of Dnmt3a and Dnmt3b expression in primordial germ cells of female mouse embryos.
Shuji Takada, Eugene Berezikov, Young Lim Choi, Yoshihiro Yamashita, Hiroyuki Mano. RNA 2009
64
14

Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles.
Alice Jouneau, Constance Ciaudo, Odile Sismeiro, Vincent Brochard, Luc Jouneau, Sandrine Vandormael-Pournin, Jean-Yves Coppée, Qi Zhou, Edith Heard, Christophe Antoniewski,[...]. RNA 2012
73
12

MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries.
Merav Bar, Stacia K Wyman, Brian R Fritz, Junlin Qi, Kavita S Garg, Rachael K Parkin, Evan M Kroh, Ausra Bendoraite, Patrick S Mitchell, Angelique M Nelson,[...]. Stem Cells 2008
243
9

The miR-290-295 cluster promotes pluripotency maintenance by regulating cell cycle phase distribution in mouse embryonic stem cells.
Zsuzsanna Lichner, Emoke Páll, Andrea Kerekes, Eva Pállinger, Pouneh Maraghechi, Zsuzsanna Bosze, Elen Gócza. Differentiation 2011
75
12

Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.
Rui Yi, Yi Qin, Ian G Macara, Bryan R Cullen. Genes Dev 2003
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.