A citation-based method for searching scientific literature

Michal Lubas, Marianne S Christensen, Maiken S Kristiansen, Michal Domanski, Lasse G Falkenby, Søren Lykke-Andersen, Jens S Andersen, Andrzej Dziembowski, Torben Heick Jensen. Mol Cell 2011
Times Cited: 254







List of co-cited articles
1207 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.
Nicola Meola, Michal Domanski, Evdoxia Karadoulama, Yun Chen, Coline Gentil, Dennis Pultz, Kristoffer Vitting-Seerup, Søren Lykke-Andersen, Jens S Andersen, Albin Sandelin,[...]. Mol Cell 2016
108
44

The human cap-binding complex is functionally connected to the nuclear RNA exosome.
Peter Refsing Andersen, Michal Domanski, Maiken S Kristiansen, Helena Storvall, Evgenia Ntini, Celine Verheggen, Aleks Schein, Jakob Bunkenborg, Ina Poser, Marie Hallais,[...]. Nat Struct Mol Biol 2013
141
36

The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis.
Michal Lubas, Peter Refsing Andersen, Aleks Schein, Andrzej Dziembowski, Grzegorz Kudla, Torben Heick Jensen. Cell Rep 2015
103
34

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
663
30

The regulation and functions of the nuclear RNA exosome complex.
Cornelia Kilchert, Sina Wittmann, Lidia Vasiljeva. Nat Rev Mol Cell Biol 2016
169
30

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
648
27


A new yeast poly(A) polymerase complex involved in RNA quality control.
Stepánka Vanácová, Jeannette Wolf, Georges Martin, Diana Blank, Sabine Dettwiler, Arno Friedlein, Hanno Langen, Gérard Keith, Walter Keller. PLoS Biol 2005
451
25


An Mtr4/ZFC3H1 complex facilitates turnover of unstable nuclear RNAs to prevent their cytoplasmic transport and global translational repression.
Koichi Ogami, Patricia Richard, Yaqiong Chen, Mainul Hoque, Wencheng Li, James J Moresco, John R Yates, Bin Tian, James L Manley. Genes Dev 2017
46
47

Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex.
Eva-Maria Weick, M Rhyan Puno, Kurt Januszyk, John C Zinder, Michael A DiMattia, Christopher D Lima. Cell 2018
51
41

RNA exosome depletion reveals transcription upstream of active human promoters.
Pascal Preker, Jesper Nielsen, Susanne Kammler, Søren Lykke-Andersen, Marianne S Christensen, Christophe K Mapendano, Mikkel H Schierup, Torben Heick Jensen. Science 2008
516
20

CBC-ARS2 stimulates 3'-end maturation of multiple RNA families and favors cap-proximal processing.
Marie Hallais, Frédéric Pontvianne, Peter Refsing Andersen, Marcello Clerici, Daniela Lener, Nour El Houda Benbahouche, Thierry Gostan, Franck Vandermoere, Marie-Cécile Robert, Stephen Cusack,[...]. Nat Struct Mol Biol 2013
96
19

Exosome cofactor hMTR4 competes with export adaptor ALYREF to ensure balanced nuclear RNA pools for degradation and export.
Jing Fan, Bin Kuai, Guifen Wu, Xudong Wu, Binkai Chi, Lantian Wang, Ke Wang, Zhubing Shi, Heng Zhang, She Chen,[...]. EMBO J 2017
45
42

Mutually Exclusive CBC-Containing Complexes Contribute to RNA Fate.
Simone Giacometti, Nour El Houda Benbahouche, Michal Domanski, Marie-Cécile Robert, Nicola Meola, Michal Lubas, Jakob Bukenborg, Jens S Andersen, Wiebke M Schulze, Celine Verheggen,[...]. Cell Rep 2017
37
48

The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase.
Benjamin Schuch, Monika Feigenbutz, Debora L Makino, Sebastian Falk, Claire Basquin, Phil Mitchell, Elena Conti. EMBO J 2014
67
25

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
111
17

Reconstitution, activities, and structure of the eukaryotic RNA exosome.
Quansheng Liu, Jaclyn C Greimann, Christopher D Lima. Cell 2006
394
16

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L.
Rafal Tomecki, Maiken S Kristiansen, Søren Lykke-Andersen, Aleksander Chlebowski, Katja M Larsen, Roman J Szczesny, Karolina Drazkowska, Agnieszka Pastula, Jens S Andersen, Piotr P Stepien,[...]. EMBO J 2010
164
15

Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex.
Debora Lika Makino, Marc Baumgärtner, Elena Conti. Nature 2013
155
15

A single subunit, Dis3, is essentially responsible for yeast exosome core activity.
Andrzej Dziembowski, Esben Lorentzen, Elena Conti, Bertrand Séraphin. Nat Struct Mol Biol 2007
316
15


ARS2 is a general suppressor of pervasive transcription.
Claudia Iasillo, Manfred Schmid, Yousra Yahia, Muhammad A Maqbool, Nicolas Descostes, Evdoxia Karadoulama, Edouard Bertrand, Jean-Christophe Andrau, Torben Heick Jensen. Nucleic Acids Res 2017
35
42

Structure of the nuclear exosome captured on a maturing preribosome.
Jan Michael Schuller, Sebastian Falk, Lisa Fromm, Ed Hurt, Elena Conti. Science 2018
46
32


RNA degradation paths in a 12-subunit nuclear exosome complex.
Debora Lika Makino, Benjamin Schuch, Elisabeth Stegmann, Marc Baumgärtner, Claire Basquin, Elena Conti. Nature 2015
87
16

Human Telomerase RNA Processing and Quality Control.
Chi-Kang Tseng, Hui-Fang Wang, Allison M Burns, Morgan R Schroeder, Martina Gaspari, Peter Baumann. Cell Rep 2015
78
17

Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.
Sebastian Falk, Ksenia Finogenova, Mireille Melko, Christian Benda, Søren Lykke-Andersen, Torben Heick Jensen, Elena Conti. Nat Commun 2016
23
60

The RNA exosome and RNA exosome-linked disease.
Derrick J Morton, Emily G Kuiper, Stephanie K Jones, Sara W Leung, Anita H Corbett, Milo B Fasken. RNA 2018
54
25

Controlling nuclear RNA levels.
Manfred Schmid, Torben Heick Jensen. Nat Rev Genet 2018
47
29


Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase.
Sebastian Falk, Fabien Bonneau, Judith Ebert, Alexander Kögel, Elena Conti. Cell Rep 2017
23
56

RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3'-end extended forms of snRNAs.
Dominika Hrossova, Tomas Sikorsky, David Potesil, Marek Bartosovic, Josef Pasulka, Zbynek Zdrahal, Richard Stefl, Stepanka Vanacova. Nucleic Acids Res 2015
34
38

Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA.
Elizabeth V Wasmuth, Kurt Januszyk, Christopher D Lima. Nature 2014
92
14

Threading the barrel of the RNA exosome.
Claudia Schneider, David Tollervey. Trends Biochem Sci 2013
80
16

Extensive degradation of RNA precursors by the exosome in wild-type cells.
Rajani Kanth Gudipati, Zhenyu Xu, Alice Lebreton, Bertrand Séraphin, Lars M Steinmetz, Alain Jacquier, Domenico Libri. Mol Cell 2012
165
12

The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation.
Fabien Bonneau, Jérôme Basquin, Judith Ebert, Esben Lorentzen, Elena Conti. Cell 2009
180
12

Functions of the exosome in rRNA, snoRNA and snRNA synthesis.
C Allmang, J Kufel, G Chanfreau, P Mitchell, E Petfalski, D Tollervey. EMBO J 1999
452
12

Polyadenylation-dependent control of long noncoding RNA expression by the poly(A)-binding protein nuclear 1.
Yves B Beaulieu, Claudia L Kleinman, Anne-Marie Landry-Voyer, Jacek Majewski, François Bachand. PLoS Genet 2012
95
12

Transcriptome-wide analysis of exosome targets.
Claudia Schneider, Grzegorz Kudla, Wiebke Wlotzka, Alex Tuck, David Tollervey. Mol Cell 2012
134
12

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases.
C Allmang, E Petfalski, A Podtelejnikov, M Mann, D Tollervey, P Mitchell. Genes Dev 1999
360
12

RNA decay machines: the exosome.
Aleksander Chlebowski, Michał Lubas, Torben Heick Jensen, Andrzej Dziembowski. Biochim Biophys Acta 2013
149
12

The RNA Exosome Adaptor ZFC3H1 Functionally Competes with Nuclear Export Activity to Retain Target Transcripts.
Toomas Silla, Evdoxia Karadoulama, Dawid Mąkosa, Michal Lubas, Torben Heick Jensen. Cell Rep 2018
26
46

Altered RNA metabolism due to a homozygous RBM7 mutation in a patient with spinal motor neuropathy.
Michele Giunta, Shimon Edvardson, Yaobo Xu, Markus Schuelke, Aurora Gomez-Duran, Veronika Boczonadi, Orly Elpeleg, Juliane S Müller, Rita Horvath. Hum Mol Genet 2016
28
39

Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex.
Milo B Fasken, Sara W Leung, Ayan Banerjee, Maja O Kodani, Ramiro Chavez, Elizabeth A Bowman, Meghan K Purohit, Max E Rubinson, Emily H Rubinson, Anita H Corbett. J Biol Chem 2011
50
22



Canonical Poly(A) Polymerase Activity Promotes the Decay of a Wide Variety of Mammalian Nuclear RNAs.
Stefan M Bresson, Olga V Hunter, Allyson C Hunter, Nicholas K Conrad. PLoS Genet 2015
52
21

A Polyadenylation-Dependent 3' End Maturation Pathway Is Required for the Synthesis of the Human Telomerase RNA.
Duy Nguyen, Valérie Grenier St-Sauveur, Danny Bergeron, Fabien Dupuis-Sandoval, Michelle S Scott, François Bachand. Cell Rep 2015
69
15

RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity.
Evangelos Pefanis, Jiguang Wang, Gerson Rothschild, Junghyun Lim, David Kazadi, Jianbo Sun, Alexander Federation, Jaime Chao, Oliver Elliott, Zhi-Ping Liu,[...]. Cell 2015
235
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.