A citation-based method for searching scientific literature

Teruya Tamaru, Mitsuru Hattori, Kousuke Honda, Ivor Benjamin, Takeaki Ozawa, Ken Takamatsu. PLoS One 2011
Times Cited: 75







List of co-cited articles
1163 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Temperature as a universal resetting cue for mammalian circadian oscillators.
Ethan D Buhr, Seung-Hee Yoo, Joseph S Takahashi. Science 2010
529
57

Simulated body temperature rhythms reveal the phase-shifting behavior and plasticity of mammalian circadian oscillators.
Camille Saini, Jörg Morf, Markus Stratmann, Pascal Gos, Ueli Schibler. Genes Dev 2012
152
42

Rhythms of mammalian body temperature can sustain peripheral circadian clocks.
Steven A Brown, Gottlieb Zumbrunn, Fabienne Fleury-Olela, Nicolas Preitner, Ueli Schibler. Curr Biol 2002
360
41

Differential display of DNA-binding proteins reveals heat-shock factor 1 as a circadian transcription factor.
Hans Reinke, Camille Saini, Fabienne Fleury-Olela, Charna Dibner, Ivor J Benjamin, Ueli Schibler. Genes Dev 2008
146
41

System-driven and oscillator-dependent circadian transcription in mice with a conditionally active liver clock.
Benoît Kornmann, Olivier Schaad, Hermann Bujard, Joseph S Takahashi, Ueli Schibler. PLoS Biol 2007
472
37

Cold-inducible RNA-binding protein modulates circadian gene expression posttranscriptionally.
Jörg Morf, Guillaume Rey, Kim Schneider, Markus Stratmann, Jun Fujita, Felix Naef, Ueli Schibler. Science 2012
177
30

Resetting of circadian time in peripheral tissues by glucocorticoid signaling.
A Balsalobre, S A Brown, L Marcacci, F Tronche, C Kellendonk, H M Reichardt, G Schütz, U Schibler. Science 2000
26

A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
25


SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
913
22

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
21

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
948
21

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues.
Seung-Hee Yoo, Shin Yamazaki, Phillip L Lowrey, Kazuhiro Shimomura, Caroline H Ko, Ethan D Buhr, Sandra M Siepka, Hee-Kyung Hong, Won Jun Oh, Ook Joon Yoo,[...]. Proc Natl Acad Sci U S A 2004
20

Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells.
Emi Nagoshi, Camille Saini, Christoph Bauer, Thierry Laroche, Felix Naef, Ueli Schibler. Cell 2004
695
18

Extensive and divergent circadian gene expression in liver and heart.
Kai-Florian Storch, Ovidiu Lipan, Igor Leykin, N Viswanathan, Fred C Davis, Wing H Wong, Charles J Weitz. Nature 2002
18



Role of the circadian clock gene Per2 in adaptation to cold temperature.
Sylvie Chappuis, Jürgen Alexander Ripperger, Anna Schnell, Gianpaolo Rando, Corinne Jud, Walter Wahli, Urs Albrecht. Mol Metab 2013
66
18


Entrainment of the circadian clock in the liver by feeding.
K A Stokkan, S Yamazaki, H Tei, Y Sakaki, M Menaker. Science 2001
14

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
646
14

AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation.
Katja A Lamia, Uma M Sachdeva, Luciano DiTacchio, Elliot C Williams, Jacqueline G Alvarez, Daniel F Egan, Debbie S Vasquez, Henry Juguilon, Satchidananda Panda, Reuben J Shaw,[...]. Science 2009
577
14

Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.
Kathryn Moynihan Ramsey, Jun Yoshino, Cynthia S Brace, Dana Abrassart, Yumiko Kobayashi, Biliana Marcheva, Hee-Kyung Hong, Jason L Chong, Ethan D Buhr, Choogon Lee,[...]. Science 2009
750
13

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
13

High-fat diet disrupts behavioral and molecular circadian rhythms in mice.
Akira Kohsaka, Aaron D Laposky, Kathryn Moynihan Ramsey, Carmela Estrada, Corinne Joshu, Yumiko Kobayashi, Fred W Turek, Joseph Bass. Cell Metab 2007
930
13

Light activates the adrenal gland: timing of gene expression and glucocorticoid release.
Atsushi Ishida, Tatsushi Mutoh, Tomoko Ueyama, Hideki Bando, Satoru Masubuchi, Daiichiro Nakahara, Gozoh Tsujimoto, Hitoshi Okamura. Cell Metab 2005
367
13

ROS stress resets circadian clocks to coordinate pro-survival signals.
Teruya Tamaru, Mitsuru Hattori, Yasuharu Ninomiya, Genki Kawamura, Guillaume Varès, Kousuke Honda, Durga Prasad Mishra, Bing Wang, Ivor Benjamin, Paolo Sassone-Corsi,[...]. PLoS One 2013
68
14

Glucocorticoid hormones inhibit food-induced phase-shifting of peripheral circadian oscillators.
N Le Minh, F Damiola, F Tronche, G Schütz, U Schibler. EMBO J 2001
346
12

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.
Trey K Sato, Satchidananda Panda, Loren J Miraglia, Teresa M Reyes, Radu D Rudic, Peter McNamara, Kinnery A Naik, Garret A FitzGerald, Steve A Kay, John B Hogenesch. Neuron 2004
717
12

Bioluminescence imaging of individual fibroblasts reveals persistent, independently phased circadian rhythms of clock gene expression.
David K Welsh, Seung-Hee Yoo, Andrew C Liu, Joseph S Takahashi, Steve A Kay. Curr Biol 2004
476
12

Circadian integration of metabolism and energetics.
Joseph Bass, Joseph S Takahashi. Science 2010
12

Transplanted suprachiasmatic nucleus determines circadian period.
M R Ralph, R G Foster, F C Davis, M Menaker. Science 1990
12

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
859
12

Poly(ADP-ribose) polymerase 1 participates in the phase entrainment of circadian clocks to feeding.
Gad Asher, Hans Reinke, Matthias Altmeyer, Maria Gutierrez-Arcelus, Michael O Hottiger, Ueli Schibler. Cell 2010
253
10

Coordination of circadian timing in mammals.
Steven M Reppert, David R Weaver. Nature 2002
10

CLOCK-mediated acetylation of BMAL1 controls circadian function.
Jun Hirayama, Saurabh Sahar, Benedetto Grimaldi, Teruya Tamaru, Ken Takamatsu, Yasukazu Nakahata, Paolo Sassone-Corsi. Nature 2007
353
10

Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
10

Post-translational modifications in circadian rhythms.
Arun Mehra, Christopher L Baker, Jennifer J Loros, Jay C Dunlap. Trends Biochem Sci 2009
134
10

Glucocorticoid regulation of the circadian clock modulates glucose homeostasis.
Alex Y -L So, Teresita U Bernal, Marlisa L Pillsbury, Keith R Yamamoto, Brian J Feldman. Proc Natl Acad Sci U S A 2009
264
10

Role of the CLOCK protein in the mammalian circadian mechanism.
N Gekakis, D Staknis, H B Nguyen, F C Davis, L D Wilsbacher, D P King, J S Takahashi, C J Weitz. Science 1998
10

Mop3 is an essential component of the master circadian pacemaker in mammals.
M K Bunger, L D Wilsbacher, S M Moran, C Clendenin, L A Radcliffe, J B Hogenesch, M C Simon, J S Takahashi, C A Bradfield. Cell 2000
10


Brain and muscle Arnt-like protein-1 (BMAL1) controls circadian cell proliferation and susceptibility to UVB-induced DNA damage in the epidermis.
Mikhail Geyfman, Vivek Kumar, Qiang Liu, Rolando Ruiz, William Gordon, Francisco Espitia, Eric Cam, Sarah E Millar, Padhraic Smyth, Alexander Ihler,[...]. Proc Natl Acad Sci U S A 2012
150
10

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.
Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper,[...]. Science 2018
299
10

Coupling governs entrainment range of circadian clocks.
Ute Abraham, Adrián E Granada, Pål O Westermark, Markus Heine, Achim Kramer, Hanspeter Herzel. Mol Syst Biol 2010
212
9

Integration of light and temperature in the regulation of circadian gene expression in Drosophila.
Catharine E Boothroyd, Herman Wijnen, Felix Naef, Lino Saez, Michael W Young. PLoS Genet 2007
109
9

Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus.
Ruth A Akhtar, Akhilesh B Reddy, Elizabeth S Maywood, Jonathan D Clayton, Verdun M King, Andrew G Smith, Timothy W Gant, Michael H Hastings, Charalambos P Kyriacou. Curr Biol 2002
573
9

Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.
Biliana Marcheva, Kathryn Moynihan Ramsey, Ethan D Buhr, Yumiko Kobayashi, Hong Su, Caroline H Ko, Ganka Ivanova, Chiaki Omura, Shelley Mo, Martha H Vitaterna,[...]. Nature 2010
935
9

Physiological significance of a peripheral tissue circadian clock.
Katja A Lamia, Kai-Florian Storch, Charles J Weitz. Proc Natl Acad Sci U S A 2008
706
9

Molecular components of the mammalian circadian clock.
Caroline H Ko, Joseph S Takahashi. Hum Mol Genet 2006
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.