A citation-based method for searching scientific literature

Daisuke Kojima, Suguru Mori, Masaki Torii, Akimori Wada, Rika Morishita, Yoshitaka Fukada. PLoS One 2011
Times Cited: 99







List of co-cited articles
879 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Opn5 is a UV-sensitive bistable pigment that couples with Gi subtype of G protein.
Takahiro Yamashita, Hideyo Ohuchi, Sayuri Tomonari, Keiko Ikeda, Kazumi Sakai, Yoshinori Shichida. Proc Natl Acad Sci U S A 2010
109
49

Neuropsin (Opn5): a novel opsin identified in mammalian neural tissue.
Emma E Tarttelin, James Bellingham, Mark W Hankins, Russell G Foster, Robert J Lucas. FEBS Lett 2003
109
46

Neuropsin (OPN5)-mediated photoentrainment of local circadian oscillators in mammalian retina and cornea.
Ethan D Buhr, Wendy W S Yue, Xiaozhi Ren, Zheng Jiang, Hsi-Wen Rock Liao, Xue Mei, Shruti Vemaraju, Minh-Thanh Nguyen, Randall R Reed, Richard A Lang,[...]. Proc Natl Acad Sci U S A 2015
76
46

A mammalian neural tissue opsin (Opsin 5) is a deep brain photoreceptor in birds.
Yusuke Nakane, Keisuke Ikegami, Hiroko Ono, Naoyuki Yamamoto, Shosei Yoshida, Kanjun Hirunagi, Shizufumi Ebihara, Yoshihiro Kubo, Takashi Yoshimura. Proc Natl Acad Sci U S A 2010
176
31


The opsins.
Akihisa Terakita. Genome Biol 2005
315
29

Evolution of mammalian Opn5 as a specialized UV-absorbing pigment by a single amino acid mutation.
Takahiro Yamashita, Katsuhiko Ono, Hideyo Ohuchi, Akane Yumoto, Hitoshi Gotoh, Sayuri Tomonari, Kazumi Sakai, Hirofumi Fujita, Yasushi Imamoto, Sumihare Noji,[...]. J Biol Chem 2014
36
77

Melanopsin is required for non-image-forming photic responses in blind mice.
Satchidananda Panda, Ignacio Provencio, Daniel C Tu, Susana S Pires, Mark D Rollag, Ana Maria Castrucci, Mathew T Pletcher, Trey K Sato, Tim Wiltshire, Mary Andahazy,[...]. Science 2003
492
24

Homologs of vertebrate Opn3 potentially serve as a light sensor in nonphotoreceptive tissue.
Mitsumasa Koyanagi, Eiichiro Takada, Takashi Nagata, Hisao Tsukamoto, Akihisa Terakita. Proc Natl Acad Sci U S A 2013
82
29

Opsin expression in human epidermal skin.
Kirk Haltaufderhyde, Rana N Ozdeslik, Nadine L Wicks, Julia A Najera, Elena Oancea. Photochem Photobiol 2015
67
35

Melanopsin: An opsin in melanophores, brain, and eye.
I Provencio, G Jiang, W J De Grip, W P Hayes, M D Rollag. Proc Natl Acad Sci U S A 1998
598
21


Melanopsin and rod-cone photoreceptive systems account for all major accessory visual functions in mice.
S Hattar, R J Lucas, N Mrosovsky, S Thompson, R H Douglas, M W Hankins, J Lem, M Biel, F Hofmann, R G Foster,[...]. Nature 2003
771
19

Melanopsin mediates light-dependent relaxation in blood vessels.
Gautam Sikka, G Patrick Hussmann, Deepesh Pandey, Suyi Cao, Daijiro Hori, Jong Taek Park, Jochen Steppan, Jae Hyung Kim, Viachaslau Barodka, Allen C Myers,[...]. Proc Natl Acad Sci U S A 2014
62
30

Phototransduction by retinal ganglion cells that set the circadian clock.
David M Berson, Felice A Dunn, Motoharu Takao. Science 2002
18

Evolution of opsins and phototransduction.
Yoshinori Shichida, Take Matsuyama. Philos Trans R Soc Lond B Biol Sci 2009
209
18

Melanopsin (Opn4) requirement for normal light-induced circadian phase shifting.
Satchidananda Panda, Trey K Sato, Ana Maria Castrucci, Mark D Rollag, Willem J DeGrip, John B Hogenesch, Ignacio Provencio, Steve A Kay. Science 2002
557
17

Intrinsic photosensitivity of a deep brain photoreceptor.
Yusuke Nakane, Tsuyoshi Shimmura, Hideki Abe, Takashi Yoshimura. Curr Biol 2014
65
26

A novel human opsin in the inner retina.
I Provencio, I R Rodriguez, G Jiang, W P Hayes, E F Moreira, M D Rollag. J Neurosci 2000
676
16

Expressions of rod and cone photoreceptor-like proteins in human epidermis.
Moe Tsutsumi, Kazuyuki Ikeyama, Sumiko Denda, Jotaro Nakanishi, Shigeyoshi Fuziwara, Hirofumi Aoki, Mitsuhiro Denda. Exp Dermatol 2009
44
36

Neuropsin (OPN5) Mediates Local Light-Dependent Induction of Circadian Clock Genes and Circadian Photoentrainment in Exposed Murine Skin.
Ethan D Buhr, Shruti Vemaraju, Nicolás Diaz, Richard A Lang, Russell N Van Gelder. Curr Biol 2019
36
44

Phototransduction motifs and variations.
King-Wai Yau, Roger C Hardie. Cell 2009
245
15

UVA phototransduction drives early melanin synthesis in human melanocytes.
Nadine L Wicks, Jason W Chan, Julia A Najera, Jonathan M Ciriello, Elena Oancea. Curr Biol 2011
79
18

Diminished pupillary light reflex at high irradiances in melanopsin-knockout mice.
R J Lucas, S Hattar, M Takao, D M Berson, R G Foster, K-W Yau. Science 2003
557
14

Ciliary photoreceptors with a vertebrate-type opsin in an invertebrate brain.
Detlev Arendt, Kristin Tessmar-Raible, Heidi Snyman, Adriaan W Dorresteijn, Joachim Wittbrodt. Science 2004
235
14

An opsin 5-dopamine pathway mediates light-dependent vascular development in the eye.
Minh-Thanh T Nguyen, Shruti Vemaraju, Gowri Nayak, Yoshinobu Odaka, Ethan D Buhr, Nuria Alonzo, Uyen Tran, Matthew Batie, Brian A Upton, Martin Darvas,[...]. Nat Cell Biol 2019
22
63

Bistable UV pigment in the lamprey pineal.
Mitsumasa Koyanagi, Emi Kawano, Yoshimi Kinugawa, Tadashi Oishi, Yoshinori Shichida, Satoshi Tamotsu, Akihisa Terakita. Proc Natl Acad Sci U S A 2004
93
13


Characterization of a novel human opsin gene with wide tissue expression and identification of embedded and flanking genes on chromosome 1q43.
S Halford, M S Freedman, J Bellingham, S L Inglis, S Poopalasundaram, B G Soni, R G Foster, D M Hunt. Genomics 2001
63
20

Encephalopsin (OPN3) protein abundance in the adult mouse brain.
Juuso Nissilä, Satu Mänttäri, Terttu Särkioja, Hannu Tuominen, Timo Takala, Markku Timonen, Seppo Saarela. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2012
33
39

Shedding new light on opsin evolution.
Megan L Porter, Joseph R Blasic, Michael J Bok, Evan G Cameron, Thomas Pringle, Thomas W Cronin, Phyllis R Robinson. Proc Biol Sci 2012
157
13

Violet light down-regulates the expression of specific differentiation markers through Rhodopsin in normal human epidermal keratinocytes.
Hyoung-June Kim, Eui Dong Son, Ji-Yong Jung, Hyun Choi, Tae Ryong Lee, Dong Wook Shin. PLoS One 2013
34
38

An extended family of novel vertebrate photopigments is widely expressed and displays a diversity of function.
Wayne I L Davies, T Katherine Tamai, Lei Zheng, Josephine K Fu, Jason Rihel, Russell G Foster, David Whitmore, Mark W Hankins. Genome Res 2015
71
18

Impaired Circadian Photoentrainment in Opn5-Null Mice.
Wataru Ota, Yusuke Nakane, Samer Hattar, Takashi Yoshimura. iScience 2018
18
72

Violet-light suppression of thermogenesis by opsin 5 hypothalamic neurons.
Kevin X Zhang, Shane D'Souza, Brian A Upton, Stace Kernodle, Shruti Vemaraju, Gowri Nayak, Kevin D Gaitonde, Amanda L Holt, Courtney D Linne, April N Smith,[...]. Nature 2020
34
38

The evolution of irradiance detection: melanopsin and the non-visual opsins.
Stuart N Peirson, Stephanie Halford, Russell G Foster. Philos Trans R Soc Lond B Biol Sci 2009
137
12

Gq-coupled rhodopsin subfamily composed of invertebrate visual pigment and melanopsin.
Mitsumasa Koyanagi, Akihisa Terakita. Photochem Photobiol 2008
53
22

Melanocytes Sense Blue Light and Regulate Pigmentation through Opsin-3.
Claire Regazzetti, Laura Sormani, Delphine Debayle, Françoise Bernerd, Meri K Tulic, Gian Marco De Donatis, Bérengère Chignon-Sicard, Stéphane Rocchi, Thierry Passeron. J Invest Dermatol 2018
113
12

Melanopsin-expressing retinal ganglion-cell photoreceptors: cellular diversity and role in pattern vision.
Jennifer L Ecker, Olivia N Dumitrescu, Kwoon Y Wong, Nazia M Alam, Shih-Kuo Chen, Tara LeGates, Jordan M Renna, Glen T Prusky, David M Berson, Samer Hattar. Neuron 2010
397
11

A non-mammalian type opsin 5 functions dually in the photoreceptive and non-photoreceptive organs of birds.
Hideyo Ohuchi, Takahiro Yamashita, Sayuri Tomonari, Sari Fujita-Yanagibayashi, Kazumi Sakai, Sumihare Noji, Yoshinori Shichida. PLoS One 2012
28
39

Diversity of animal opsin-based pigments and their optogenetic potential.
Mitsumasa Koyanagi, Akihisa Terakita. Biochim Biophys Acta 2014
62
17

Crystal structure of rhodopsin: A G protein-coupled receptor.
K Palczewski, T Kumasaka, T Hori, C A Behnke, H Motoshima, B A Fox, I Le Trong, D C Teller, T Okada, R E Stenkamp,[...]. Science 2000
11



Photon capture and signalling by melanopsin retinal ganglion cells.
Michael Tri H Do, Shin H Kang, Tian Xue, Haining Zhong, Hsi-Wen Liao, Dwight E Bergles, King-Wai Yau. Nature 2009
183
10

Melanopsin: an exciting photopigment.
Mark W Hankins, Stuart N Peirson, Russell G Foster. Trends Neurosci 2008
238
10

The circadian clock in the retina controls rod-cone coupling.
Christophe Ribelayga, Yu Cao, Stuart C Mangel. Neuron 2008
166
10

Melanopsin cells are the principal conduits for rod-cone input to non-image-forming vision.
Ali D Güler, Jennifer L Ecker, Gurprit S Lall, Shafiqul Haq, Cara M Altimus, Hsi-Wen Liao, Alun R Barnard, Hugh Cahill, Tudor C Badea, Haiqing Zhao,[...]. Nature 2008
520
10

Regulation of mammalian circadian behavior by non-rod, non-cone, ocular photoreceptors.
M S Freedman, R J Lucas, B Soni, M von Schantz, M Muñoz, Z David-Gray, R Foster. Science 1999
520
10

Melanopsin and other novel mammalian opsins.
Tida Kumbalasiri, Ignacio Provencio. Exp Eye Res 2005
50
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.