A citation-based method for searching scientific literature

Nicholas J Watkins, Markus T Bohnsack. Wiley Interdiscip Rev RNA 2012
Times Cited: 262







List of co-cited articles
1379 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
198
29

Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs.
Z Kiss-László, Y Henry, J P Bachellerie, M Caizergues-Ferrer, T Kiss. Cell 1996
601
20

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.
Jenny Erales, Virginie Marchand, Baptiste Panthu, Sandra Gillot, Stéphane Belin, Sandra E Ghayad, Maxime Garcia, Florian Laforêts, Virginie Marcel, Agnès Baudin-Baillieu,[...]. Proc Natl Acad Sci U S A 2017
94
21

Assembly and trafficking of box C/D and H/ACA snoRNPs.
Séverine Massenet, Edouard Bertrand, Céline Verheggen. RNA Biol 2017
72
25

Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity.
Nicolai Krogh, Martin D Jansson, Sophia J Häfner, Disa Tehler, Ulf Birkedal, Mikkel Christensen-Dalsgaard, Anders H Lund, Henrik Nielsen. Nucleic Acids Res 2016
113
18

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
268
17

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
408
15

'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification.
Sunny Sharma, Denis L J Lafontaine. Trends Biochem Sci 2015
114
15

p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
147
15

rRNA modifications and ribosome function.
Wayne A Decatur, Maurille J Fournier. Trends Biochem Sci 2002
404
15

The emerging landscape of small nucleolar RNAs in cell biology.
Fabien Dupuis-Sandoval, Mikaël Poirier, Michelle S Scott. Wiley Interdiscip Rev RNA 2015
119
14

Noncoding RNAs in eukaryotic ribosome biogenesis and function.
Denis L J Lafontaine. Nat Struct Mol Biol 2015
139
14

Identification of sites of 2'-O-methylation vulnerability in human ribosomal RNAs by systematic mapping.
Sunny Sharma, Virginie Marchand, Yuri Motorin, Denis L J Lafontaine. Sci Rep 2017
50
28

Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
Shivendra Kishore, Andreas R Gruber, Dominik J Jedlinski, Afzal P Syed, Hadi Jorjani, Mihaela Zavolan. Genome Biol 2013
73
17

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
506
13

The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors.
Lionel Tafforeau, Christiane Zorbas, Jean-Louis Langhendries, Sahra-Taylor Mullineux, Vassiliki Stamatopoulou, Romain Mullier, Ludivine Wacheul, Denis L J Lafontaine. Mol Cell 2013
238
13

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
363
12

Ribosome assembly coming into focus.
Sebastian Klinge, John L Woolford. Nat Rev Mol Cell Biol 2019
117
12

Profiling of ribose methylations in RNA by high-throughput sequencing.
Ulf Birkedal, Mikkel Christensen-Dalsgaard, Nicolai Krogh, Radhakrishnan Sabarinathan, Jan Gorodkin, Henrik Nielsen. Angew Chem Int Ed Engl 2015
111
11

Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells.
Thomas M Carlile, Maria F Rojas-Duran, Boris Zinshteyn, Hakyung Shin, Kristen M Bartoli, Wendy V Gilbert. Nature 2014
461
11

Architecture of the yeast small subunit processome.
Malik Chaker-Margot, Jonas Barandun, Mirjam Hunziker, Sebastian Klinge. Science 2017
78
14

Elevated snoRNA biogenesis is essential in breast cancer.
H Su, T Xu, S Ganapathy, M Shadfan, M Long, T H-M Huang, I Thompson, Z-M Yuan. Oncogene 2014
105
11

Ribosomopathies: human disorders of ribosome dysfunction.
Anupama Narla, Benjamin L Ebert. Blood 2010
472
11

The complete structure of the small-subunit processome.
Jonas Barandun, Malik Chaker-Margot, Mirjam Hunziker, Kelly R Molloy, Brian T Chait, Sebastian Klinge. Nat Struct Mol Biol 2017
63
17

Illumina-based RiboMethSeq approach for mapping of 2'-O-Me residues in RNA.
Virginie Marchand, Florence Blanloeil-Oillo, Mark Helm, Yuri Motorin. Nucleic Acids Res 2016
92
11


Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs.
A Gregory Matera, Rebecca M Terns, Michael P Terns. Nat Rev Mol Cell Biol 2007
477
10

An updated human snoRNAome.
Hadi Jorjani, Stephanie Kehr, Dominik J Jedlinski, Rafal Gumienny, Jana Hertel, Peter F Stadler, Mihaela Zavolan, Andreas R Gruber. Nucleic Acids Res 2016
108
10

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
109
10

Molecular architecture of the 90S small subunit pre-ribosome.
Qi Sun, Xing Zhu, Jia Qi, Weidong An, Pengfei Lan, Dan Tan, Rongchang Chen, Bing Wang, Sanduo Zheng, Cheng Zhang,[...]. Elife 2017
83
12


The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
10


snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs.
Laurent Lestrade, Michel J Weber. Nucleic Acids Res 2006
339
10

Ribosome biogenesis in cancer: new players and therapeutic avenues.
Joffrey Pelletier, George Thomas, Siniša Volarević. Nat Rev Cancer 2018
182
10

Mapping the cleavage sites on mammalian pre-rRNAs: where do we stand?
Sahra-Taylor Mullineux, Denis L J Lafontaine. Biochimie 2012
125
10

Specialized box C/D snoRNPs act as antisense guides to target RNA base acetylation.
Sunny Sharma, Jun Yang, Rob van Nues, Peter Watzinger, Peter Kötter, Denis L J Lafontaine, Sander Granneman, Karl-Dieter Entian. PLoS Genet 2017
39
25

A Pan-cancer Analysis of the Expression and Clinical Relevance of Small Nucleolar RNAs in Human Cancer.
Jing Gong, Yajuan Li, Chun-Jie Liu, Yu Xiang, Chunlai Li, Youqiong Ye, Zhao Zhang, David H Hawke, Peter K Park, Lixia Diao,[...]. Cell Rep 2017
88
11

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Yury S Polikanov, Sergey V Melnikov, Dieter Söll, Thomas A Steitz. Nat Struct Mol Biol 2015
112
9

Dual function of C/D box small nucleolar RNAs in rRNA modification and alternative pre-mRNA splicing.
Marina Falaleeva, Amadis Pages, Zaneta Matuszek, Sana Hidmi, Lily Agranat-Tamir, Konstantin Korotkov, Yuval Nevo, Eduardo Eyras, Ruth Sperling, Stefan Stamm. Proc Natl Acad Sci U S A 2016
86
10

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
403
9

Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae.
Yvonne N Osheim, Sarah L French, Kristin M Keck, Erica A Champion, Krasimir Spasov, François Dragon, Susan J Baserga, Ann L Beyer. Mol Cell 2004
189
9

Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita.
Andrew Yoon, Guang Peng, Yves Brandenburger, Ornella Zollo, Wei Xu, Eduardo Rego, Davide Ruggero. Science 2006
290
9

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.
Schraga Schwartz, Douglas A Bernstein, Maxwell R Mumbach, Marko Jovanovic, Rebecca H Herbst, Brian X León-Ricardo, Jesse M Engreitz, Mitchell Guttman, Rahul Satija, Eric S Lander,[...]. Cell 2014
433
9

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
696
9

Ribosomopathies: There's strength in numbers.
Eric W Mills, Rachel Green. Science 2017
152
9

The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.
Richa Sardana, Xin Liu, Sander Granneman, Jieyi Zhu, Michael Gill, Ophelia Papoulas, Edward M Marcotte, David Tollervey, Carl C Correll, Arlen W Johnson. PLoS Biol 2015
43
20

The 5S RNP couples p53 homeostasis to ribosome biogenesis and nucleolar stress.
Katherine E Sloan, Markus T Bohnsack, Nicholas J Watkins. Cell Rep 2013
153
9

MODOMICS: a database of RNA modification pathways. 2017 update.
Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter,[...]. Nucleic Acids Res 2018
619
9

Landscape of the complete RNA chemical modifications in the human 80S ribosome.
Masato Taoka, Yuko Nobe, Yuka Yamaki, Ko Sato, Hideaki Ishikawa, Keiichi Izumikawa, Yoshio Yamauchi, Kouji Hirota, Hiroshi Nakayama, Nobuhiro Takahashi,[...]. Nucleic Acids Res 2018
75
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.