A citation-based method for searching scientific literature

Timothy E Audas, Mathieu D Jacob, Stephen Lee. Mol Cell 2012
Times Cited: 170







List of co-cited articles
1306 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The nucleolus under stress.
Séverine Boulon, Belinda J Westman, Saskia Hutten, François-Michel Boisvert, Angus I Lamond. Mol Cell 2010
641
30

Environmental cues induce a long noncoding RNA-dependent remodeling of the nucleolus.
Mathieu D Jacob, Timothy E Audas, James Uniacke, Laura Trinkle-Mulcahy, Stephen Lee. Mol Biol Cell 2013
64
42

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
804
26

Adaptation to Stressors by Systemic Protein Amyloidogenesis.
Timothy E Audas, Danielle E Audas, Mathieu D Jacob, J J David Ho, Mireille Khacho, Miling Wang, J Kishan Perera, Caroline Gardiner, Clay A Bennett, Trajen Head,[...]. Dev Cell 2016
92
23

Alu element-containing RNAs maintain nucleolar structure and function.
Maïwen Caudron-Herger, Teresa Pankert, Jeanette Seiler, Attila Németh, Renate Voit, Ingrid Grummt, Karsten Rippe. EMBO J 2015
90
23

The multifunctional nucleolus.
François-Michel Boisvert, Silvana van Koningsbruggen, Joaquín Navascués, Angus I Lamond. Nat Rev Mol Cell Biol 2007
19

The nucleolar detention pathway: A cellular strategy for regulating molecular networks.
Timothy E Audas, Mathieu D Jacob, Stephen Lee. Cell Cycle 2012
36
52


Intergenic transcripts regulate the epigenetic state of rRNA genes.
Christine Mayer, Kerstin-Maike Schmitz, Junwei Li, Ingrid Grummt, Raffaella Santoro. Mol Cell 2006
235
18

Stress-Induced Low Complexity RNA Activates Physiological Amyloidogenesis.
Miling Wang, Xianzun Tao, Mathieu D Jacob, Clayton A Bennett, J J David Ho, Mark L Gonzalgo, Timothy E Audas, Stephen Lee. Cell Rep 2018
41
43

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
17

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.
Christine M Clemson, John N Hutchinson, Sergio A Sara, Alexander W Ensminger, Archa H Fox, Andrew Chess, Jeanne B Lawrence. Mol Cell 2009
960
16

Quiescence-induced LncRNAs trigger H4K20 trimethylation and transcriptional silencing.
Holger Bierhoff, Marcel Andre Dammert, David Brocks, Silvia Dambacher, Gunnar Schotta, Ingrid Grummt. Mol Cell 2014
98
15

The nucleolus functions as a phase-separated protein quality control compartment.
F Frottin, F Schueder, S Tiwary, R Gupta, R Körner, T Schlichthaerle, J Cox, R Jungmann, F U Hartl, M S Hipp. Science 2019
192
15

Nucleolar proteome dynamics.
Jens S Andersen, Yun W Lam, Anthony K L Leung, Shao-En Ong, Carol E Lyon, Angus I Lamond, Matthias Mann. Nature 2005
861
13

Dynamic sorting of nuclear components into distinct nucleolar caps during transcriptional inhibition.
Yaron Shav-Tal, Janna Blechman, Xavier Darzacq, Cristina Montagna, Billy T Dye, James G Patton, Robert H Singer, Dov Zipori. Mol Biol Cell 2005
249
13

Intergenic transcripts originating from a subclass of ribosomal DNA repeats silence ribosomal RNA genes in trans.
Raffaella Santoro, Kerstin-Maike Schmitz, Juan Sandoval, Ingrid Grummt. EMBO Rep 2010
76
17

Heat shock represses rRNA synthesis by inactivation of TIF-IA and lncRNA-dependent changes in nucleosome positioning.
Zhongliang Zhao, Marcel A Dammert, Sven Hoppe, Holger Bierhoff, Ingrid Grummt. Nucleic Acids Res 2016
40
32

RNA phase transitions in repeat expansion disorders.
Ankur Jain, Ronald D Vale. Nature 2017
379
13

Liquid phase condensation in cell physiology and disease.
Yongdae Shin, Clifford P Brangwynne. Science 2017
13

lncRNA-Induced Nucleosome Repositioning Reinforces Transcriptional Repression of rRNA Genes upon Hypotonic Stress.
Zhongliang Zhao, Marcel Andre Dammert, Ingrid Grummt, Holger Bierhoff. Cell Rep 2016
39
33


Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
12

Nucleophosmin integrates within the nucleolus via multi-modal interactions with proteins displaying R-rich linear motifs and rRNA.
Diana M Mitrea, Jaclyn A Cika, Clifford S Guy, David Ban, Priya R Banerjee, Christopher B Stanley, Amanda Nourse, Ashok A Deniz, Richard W Kriwacki. Elife 2016
248
12

Nucleolar targeting: the hub of the matter.
Edward Emmott, Julian A Hiscox. EMBO Rep 2009
209
12

HIF activation by pH-dependent nucleolar sequestration of VHL.
Karim Mekhail, Lakshman Gunaratnam, Marie-Eve Bonicalzi, Stephen Lee. Nat Cell Biol 2004
188
12

Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes.
Kerstin-Maike Schmitz, Christine Mayer, Anna Postepska, Ingrid Grummt. Genes Dev 2010
344
12

Noncoding transcripts in sense and antisense orientation regulate the epigenetic state of ribosomal RNA genes.
H Bierhoff, K Schmitz, F Maass, J Ye, I Grummt. Cold Spring Harb Symp Quant Biol 2010
70
17

Initial genomics of the human nucleolus.
Attila Németh, Ana Conesa, Javier Santoyo-Lopez, Ignacio Medina, David Montaner, Bálint Péterfia, Irina Solovei, Thomas Cremer, Joaquin Dopazo, Gernot Längst. PLoS Genet 2010
243
11

The shared genomic architecture of human nucleolar organizer regions.
Ioanna Floutsakou, Saumya Agrawal, Thong T Nguyen, Cathal Seoighe, Austen R D Ganley, Brian McStay. Genome Res 2013
73
15


Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes.
Clifford P Brangwynne, Timothy J Mitchison, Anthony A Hyman. Proc Natl Acad Sci U S A 2011
647
11



The epigenetics of rRNA genes: from molecular to chromosome biology.
Brian McStay, Ingrid Grummt. Annu Rev Cell Dev Biol 2008
365
11

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Avinash Patel, Hyun O Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus M Franzmann,[...]. Cell 2015
11

Functional Domains of NEAT1 Architectural lncRNA Induce Paraspeckle Assembly through Phase Separation.
Tomohiro Yamazaki, Sylvie Souquere, Takeshi Chujo, Simon Kobelke, Yee Seng Chong, Archa H Fox, Charles S Bond, Shinichi Nakagawa, Gerard Pierron, Tetsuro Hirose. Mol Cell 2018
259
11

Regulation of ubiquitin ligase dynamics by the nucleolus.
Karim Mekhail, Mireille Khacho, Amanda Carrigan, Robert R J Hache, Lakshman Gunaratnam, Stephen Lee. J Cell Biol 2005
64
17

Dynamic regulation of nucleolar architecture.
Attila Németh, Ingrid Grummt. Curr Opin Cell Biol 2018
57
19

Integrative genomic analysis of human ribosomal DNA.
Gabriel E Zentner, Alina Saiakhova, Pavel Manaenkov, Mark D Adams, Peter C Scacheri. Nucleic Acids Res 2011
108
11


SLERT Regulates DDX21 Rings Associated with Pol I Transcription.
Yu-Hang Xing, Run-Wen Yao, Yang Zhang, Chun-Jie Guo, Shan Jiang, Guang Xu, Rui Dong, Li Yang, Ling-Ling Chen. Cell 2017
129
11

A Short Tandem Repeat-Enriched RNA Assembles a Nuclear Compartment to Control Alternative Splicing and Promote Cell Survival.
Karen Yap, Svetlana Mukhina, Gen Zhang, Jason S C Tan, Hong Sheng Ong, Eugene V Makeyev. Mol Cell 2018
63
17

Architectural RNAs (arcRNAs): A class of long noncoding RNAs that function as the scaffold of nuclear bodies.
Takeshi Chujo, Tomohiro Yamazaki, Tetsuro Hirose. Biochim Biophys Acta 2016
101
10

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles.
Yasnory T F Sasaki, Takashi Ideue, Miho Sano, Toutai Mituyama, Tetsuro Hirose. Proc Natl Acad Sci U S A 2009
423
10

Involvement of human ribosomal proteins in nucleolar structure and p53-dependent nucleolar stress.
Emilien Nicolas, Pascaline Parisot, Celina Pinto-Monteiro, Roxane de Walque, Christophe De Vleeschouwer, Denis L J Lafontaine. Nat Commun 2016
103
10

Where no RNA polymerase has gone before: novel functional transcripts derived from the ribosomal intergenic spacer.
Mathieu D Jacob, Timothy E Audas, Sahra-Taylor Mullineux, Stephen Lee. Nucleus 2012
23
43


lncRNA maturation to initiate heterochromatin formation in the nucleolus is required for exit from pluripotency in ESCs.
Nataša Savić, Dominik Bär, Sergio Leone, Sandra C Frommel, Fabienne A Weber, Eva Vollenweider, Elena Ferrari, Urs Ziegler, Andres Kaech, Olga Shakhova,[...]. Cell Stem Cell 2014
84
11

Genome organization in and around the nucleolus.
Attila Németh, Gernot Längst. Trends Genet 2011
134
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.